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Conserved domains on  [gi|446560685|ref|WP_000638031|]
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MULTISPECIES: 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [Enterobacteriaceae]

Protein Classification

4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE( domain architecture ID 10014951)

4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK15051 PRK15051
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
1-111 8.18e-55

4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional


:

Pssm-ID: 185011  Cd Length: 111  Bit Score: 166.14  E-value: 8.18e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446560685   1 MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLA 80
Cdd:PRK15051   1 MIWLTLVFASLLSVAGQLCQKQATRPVAIGKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLA 80
                         90       100       110
                 ....*....|....*....|....*....|.
gi 446560685  81 AVKLWHEPVSPRHWCGVAFIIGGIVILGSTV 111
Cdd:PRK15051  81 AVKLWHEPVSPRHWCGVAFIIGGIVILGSTV 111
 
Name Accession Description Interval E-value
PRK15051 PRK15051
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
1-111 8.18e-55

4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional


Pssm-ID: 185011  Cd Length: 111  Bit Score: 166.14  E-value: 8.18e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446560685   1 MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLA 80
Cdd:PRK15051   1 MIWLTLVFASLLSVAGQLCQKQATRPVAIGKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLA 80
                         90       100       110
                 ....*....|....*....|....*....|.
gi 446560685  81 AVKLWHEPVSPRHWCGVAFIIGGIVILGSTV 111
Cdd:PRK15051  81 AVKLWHEPVSPRHWCGVAFIIGGIVILGSTV 111
EmrE COG2076
Multidrug transporter EmrE and related cation transporters [Defense mechanisms];
3-107 2.60e-10

Multidrug transporter EmrE and related cation transporters [Defense mechanisms];


Pssm-ID: 441679  Cd Length: 105  Bit Score: 52.79  E-value: 2.60e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446560685   3 WLTLVFASLLSVAGQLCQKQATCFVAInkrrkhivLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAA 81
Cdd:COG2076    2 WLYLLLAGLLEVVWTLALKLSDGFTRL--------LPSVLTVVGYALSFYLLSLALKTLPVGTAYAVWTgIGAVGTALVG 73
                         90       100
                 ....*....|....*....|....*.
gi 446560685  82 VKLWHEPVSPRHWCGVAFIIGGIVIL 107
Cdd:COG2076   74 ILLFGEPLSLARLLGIALIIAGVVGL 99
 
Name Accession Description Interval E-value
PRK15051 PRK15051
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
1-111 8.18e-55

4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional


Pssm-ID: 185011  Cd Length: 111  Bit Score: 166.14  E-value: 8.18e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446560685   1 MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLA 80
Cdd:PRK15051   1 MIWLTLVFASLLSVAGQLCQKQATRPVAIGKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLA 80
                         90       100       110
                 ....*....|....*....|....*....|.
gi 446560685  81 AVKLWHEPVSPRHWCGVAFIIGGIVILGSTV 111
Cdd:PRK15051  81 AVKLWHEPVSPRHWCGVAFIIGGIVILGSTV 111
EmrE COG2076
Multidrug transporter EmrE and related cation transporters [Defense mechanisms];
3-107 2.60e-10

Multidrug transporter EmrE and related cation transporters [Defense mechanisms];


Pssm-ID: 441679  Cd Length: 105  Bit Score: 52.79  E-value: 2.60e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446560685   3 WLTLVFASLLSVAGQLCQKQATCFVAInkrrkhivLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAA 81
Cdd:COG2076    2 WLYLLLAGLLEVVWTLALKLSDGFTRL--------LPSVLTVVGYALSFYLLSLALKTLPVGTAYAVWTgIGAVGTALVG 73
                         90       100
                 ....*....|....*....|....*.
gi 446560685  82 VKLWHEPVSPRHWCGVAFIIGGIVIL 107
Cdd:COG2076   74 ILLFGEPLSLARLLGIALIIAGVVGL 99
PRK02971 PRK02971
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
51-104 5.54e-07

4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional


Pssm-ID: 235094  Cd Length: 129  Bit Score: 44.60  E-value: 5.54e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446560685  51 MVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKL--WHEPVSPRHWCGVAFIIGGI 104
Cdd:PRK02971  62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLpwFNETFSLKKTLGVACIMLGV 117
RhaT COG0697
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and ...
32-107 4.97e-03

Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only];


Pssm-ID: 440461 [Multi-domain]  Cd Length: 290  Bit Score: 34.82  E-value: 4.97e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446560685  32 RRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107
Cdd:COG0697   61 SRRDWLLLLLRGLLGLALAFLLFFLALQYTPAALAALLLALAPLFVALLAALLLGERLSRRRWLGLLLGFAGVLLI 136
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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