NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|446588365|ref|WP_000665711|]
View 

MULTISPECIES: DUF3932 family protein [Bacillus]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF3932 super family cl16074
Protein of unknown function (DUF3932); This family of proteins is functionally uncharacterized. ...
 1-79 9.36e-29

Protein of unknown function (DUF3932); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.


The actual alignment was detected with superfamily member pfam13068:

Pssm-ID: 432955  Cd Length: 81  Bit Score: 98.36  E-value: 9.36e-29
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446588365   1 MKEVFRLQTDFSSSFDRWVSSFVSDHPAQLEWTTLKELIHEYTTSHTNETLPTYISSALTYYAQRVSTTNNSEIVIFEN 79
Cdd:pfam13068  1 MKEVFRLQTDFSSSFDVWASSFVSETPTHLHWSTLKELIHEYTALHTLQPVPERISSSITYYAQRVSSPSNTEIIFYEN 79
 
Name Accession Description Interval E-value
DUF3932 pfam13068
Protein of unknown function (DUF3932); This family of proteins is functionally uncharacterized. ...
 1-79 9.36e-29

Protein of unknown function (DUF3932); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.


Pssm-ID: 432955  Cd Length: 81  Bit Score: 98.36  E-value: 9.36e-29
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446588365   1 MKEVFRLQTDFSSSFDRWVSSFVSDHPAQLEWTTLKELIHEYTTSHTNETLPTYISSALTYYAQRVSTTNNSEIVIFEN 79
Cdd:pfam13068  1 MKEVFRLQTDFSSSFDVWASSFVSETPTHLHWSTLKELIHEYTALHTLQPVPERISSSITYYAQRVSSPSNTEIIFYEN 79
 
Name Accession Description Interval E-value
DUF3932 pfam13068
Protein of unknown function (DUF3932); This family of proteins is functionally uncharacterized. ...
 1-79 9.36e-29

Protein of unknown function (DUF3932); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.


Pssm-ID: 432955  Cd Length: 81  Bit Score: 98.36  E-value: 9.36e-29
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446588365   1 MKEVFRLQTDFSSSFDRWVSSFVSDHPAQLEWTTLKELIHEYTTSHTNETLPTYISSALTYYAQRVSTTNNSEIVIFEN 79
Cdd:pfam13068  1 MKEVFRLQTDFSSSFDVWASSFVSETPTHLHWSTLKELIHEYTALHTLQPVPERISSSITYYAQRVSSPSNTEIIFYEN 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH