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Conserved domains on  [gi|446593256|ref|WP_000670602|]
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MULTISPECIES: DUF5065 family protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5065 super family cl25069
Domain of unknown function (DUF5065); This family is found in found in Bacillus species. The ...
 2-83 6.92e-24

Domain of unknown function (DUF5065); This family is found in found in Bacillus species. The function is not known.


The actual alignment was detected with superfamily member pfam16723:

Pssm-ID: 374754  Cd Length: 156  Bit Score: 89.74  E-value: 6.92e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446593256    2 KFLRQSTIIGALTVGVFSYSNTIGTLPPASAESqpTQKESRFLDTWRWQNYFLLHHNAD----FIEELAVGDLKHGDTFD 77
Cdd:pfam16723   1 MKLGKLALVGALALGGFTAVETLQPKPAAAAAT--VQAASTVYDNWGFKNFFDLHQFADnmpaFLAELAKGSYKTGDTFN 78


                  ....*.
gi 446593256   78 VTIYNG 83
Cdd:pfam16723  79 ITIYWG 84
 
Name Accession Description Interval E-value
DUF5065 pfam16723
Domain of unknown function (DUF5065); This family is found in found in Bacillus species. The ...
 2-83 6.92e-24

Domain of unknown function (DUF5065); This family is found in found in Bacillus species. The function is not known.


Pssm-ID: 374754  Cd Length: 156  Bit Score: 89.74  E-value: 6.92e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446593256    2 KFLRQSTIIGALTVGVFSYSNTIGTLPPASAESqpTQKESRFLDTWRWQNYFLLHHNAD----FIEELAVGDLKHGDTFD 77
Cdd:pfam16723   1 MKLGKLALVGALALGGFTAVETLQPKPAAAAAT--VQAASTVYDNWGFKNFFDLHQFADnmpaFLAELAKGSYKTGDTFN 78


                  ....*.
gi 446593256   78 VTIYNG 83
Cdd:pfam16723  79 ITIYWG 84
 
Name Accession Description Interval E-value
DUF5065 pfam16723
Domain of unknown function (DUF5065); This family is found in found in Bacillus species. The ...
 2-83 6.92e-24

Domain of unknown function (DUF5065); This family is found in found in Bacillus species. The function is not known.


Pssm-ID: 374754  Cd Length: 156  Bit Score: 89.74  E-value: 6.92e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446593256    2 KFLRQSTIIGALTVGVFSYSNTIGTLPPASAESqpTQKESRFLDTWRWQNYFLLHHNAD----FIEELAVGDLKHGDTFD 77
Cdd:pfam16723   1 MKLGKLALVGALALGGFTAVETLQPKPAAAAAT--VQAASTVYDNWGFKNFFDLHQFADnmpaFLAELAKGSYKTGDTFN 78


                  ....*.
gi 446593256   78 VTIYNG 83
Cdd:pfam16723  79 ITIYWG 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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