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Conserved domains on  [gi|446618197|ref|WP_000695543|]
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MULTISPECIES: type 1 fimbrial major subunit FimA [Enterobacteriaceae]

Protein Classification

fimbrial protein( domain architecture ID 646)

fimbrial protein similar to the type-1 fimbrial major subunit FimA, which is transported to the outer membrane by the lipoprotein sorting system, and a mature or processed FimA protein on the outer membrane is autopolymerized to form Fim fimbriae

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fimbrial super family cl01416
Fimbrial protein;
1-182 8.79e-41

Fimbrial protein;


The actual alignment was detected with superfamily member PRK15194:

Pssm-ID: 445401  Cd Length: 185  Bit Score: 135.85  E-value: 8.79e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197   1 MKIKTLAIVVLSALSLSSAAALADTTT--VNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFN 78
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADPTPvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  79 IQLNDCDTTVATKAAVAFLGTAiDATHTDVLALQSSAAG-SATNVGVQILDRTGAALALDGATFSSETTLNNGTNTIPFQ 157
Cdd:PRK15194  81 IQLNDCDPVVAATAAVAFSGQA-DATNDNLLAVASSTNTtTATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFS 159

                        170       180
                 ....*....|....*....|....*.
gi 446618197 158 ARYFATGAATPG-AANADATFKVQYQ 182
Cdd:PRK15194 160 ARYKATGTSASAgQANADATFIMKYE 185
 
Name Accession Description Interval E-value
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-182 8.79e-41

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 135.85  E-value: 8.79e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197   1 MKIKTLAIVVLSALSLSSAAALADTTT--VNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFN 78
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADPTPvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  79 IQLNDCDTTVATKAAVAFLGTAiDATHTDVLALQSSAAG-SATNVGVQILDRTGAALALDGATFSSETTLNNGTNTIPFQ 157
Cdd:PRK15194  81 IQLNDCDPVVAATAAVAFSGQA-DATNDNLLAVASSTNTtTATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFS 159

                        170       180
                 ....*....|....*....|....*.
gi 446618197 158 ARYFATGAATPG-AANADATFKVQYQ 182
Cdd:PRK15194 160 ARYKATGTSASAgQANADATFIMKYE 185
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
24-182 4.74e-33

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 115.91  E-value: 4.74e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  24 DTTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAiDA 103
Cdd:COG3539   17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTA-DS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197 104 THTDVLALqsSAAGSATNVGVQILDRTGAALALDGATfSSETTLNNGTNTIPFQARYFATGAATPG-AANADATFKVQYQ 182
Cdd:COG3539   96 ANPGLLAN--TGSGGASGVGIQLLDSDGTPIPLGTPS-SAVTLTSNGSATLPFYARYVATGATVTAgSFNATATFTIDYQ 172
Fimbrial pfam00419
Fimbrial protein;
33-182 5.82e-19

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 79.02  E-value: 5.82e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197   33 VHFKGEV--VNAACAVDAGSVDqTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAidATHTDVLA 110
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTA--DASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446618197  111 LQSSAAGSATNVGVQILDRTGAALALDGATFSSETTLNNGTNT-IPFQARYFATGAATPGA--ANADATFKVQYQ 182
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATgITFTASLVATTGGTPTAgdFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-182 8.79e-41

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 135.85  E-value: 8.79e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197   1 MKIKTLAIVVLSALSLSSAAALADTTT--VNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFN 78
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADPTPvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  79 IQLNDCDTTVATKAAVAFLGTAiDATHTDVLALQSSAAG-SATNVGVQILDRTGAALALDGATFSSETTLNNGTNTIPFQ 157
Cdd:PRK15194  81 IQLNDCDPVVAATAAVAFSGQA-DATNDNLLAVASSTNTtTATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFS 159

                        170       180
                 ....*....|....*....|....*.
gi 446618197 158 ARYFATGAATPG-AANADATFKVQYQ 182
Cdd:PRK15194 160 ARYKATGTSASAgQANADATFIMKYE 185
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
24-182 4.74e-33

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 115.91  E-value: 4.74e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  24 DTTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAiDA 103
Cdd:COG3539   17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTA-DS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197 104 THTDVLALqsSAAGSATNVGVQILDRTGAALALDGATfSSETTLNNGTNTIPFQARYFATGAATPG-AANADATFKVQYQ 182
Cdd:COG3539   96 ANPGLLAN--TGSGGASGVGIQLLDSDGTPIPLGTPS-SAVTLTSNGSATLPFYARYVATGATVTAgSFNATATFTIDYQ 172
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 24-181 3.93e-21

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 85.26  E-value: 3.93e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  24 DTTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAG-ATSSAVGFNIQLNDCDTTVATKAAVAFLGTAiD 102
Cdd:PRK15187  25 DTTTVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGmVANQKEDFTIKLEDCDTQTSQNAAVIFNGQQ-D 103

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446618197 103 ATHTDVLAlQSSAAGSATNVGVQILDRTGAALALDGAtfSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQY 181
Cdd:PRK15187 104 ANQPGSLA-NTAGAGSATNVALQLYGPDGQALNIGES--SSTVTLNDGENVIPLSVDYIATGTATAGNVTATATFSMVY 179
Fimbrial pfam00419
Fimbrial protein;
33-182 5.82e-19

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 79.02  E-value: 5.82e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197   33 VHFKGEV--VNAACAVDAGSVDqTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAidATHTDVLA 110
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTA--DASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446618197  111 LQSSAAGSATNVGVQILDRTGAALALDGATFSSETTLNNGTNT-IPFQARYFATGAATPGA--ANADATFKVQYQ 182
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATgITFTASLVATTGGTPTAgdFNATATIVVDYQ 152
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 31-182 1.32e-18

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 78.47  E-value: 1.32e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAiDATHTDVLA 110
Cdd:PRK15209  26 GTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDITTNKKVNVSFNGVG-DADDSTLVS 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446618197 111 LqSSAAGSATNVGVQILDRTGAALALDGATFSseTTLNNGTNTIPFQARYFATGAATPGA-ANADATFKVQYQ 182
Cdd:PRK15209 105 V-STEAGAATGVGIGIYDNANTLVELNTGKST--TTLAAGQTVLYFTANYVSTKDTVTTGyGNAEVDFNLSYE 174
PRK09733 PRK09733
fimbrial-like protein;
31-128 4.84e-14

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 66.51  E-value: 4.84e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKqAGATSSAVGFNIQLNDC----DTTVATKAAVAFLGTAIDATHT 106
Cdd:PRK09733  26 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLK-SDQKSLAEPFTIHLQDCmlsqGGTTYSKAKVTFTTANTMTGQS 104

                         90       100
                 ....*....|....*....|...
gi 446618197 107 DVLA-LQSSAAGSATNVGVQILD 128
Cdd:PRK09733 105 DLLKnTKETEIGGATGVGVRILD 127
PRK09934 PRK09934
fimbriae assembly protein;
33-181 1.10e-13

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 65.30  E-value: 1.10e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  33 VHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCdttvaTKAAVAFLGTAIDATHTDVLALQ 112
Cdd:PRK09934  29 IELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGC-----PPGSASITFTGTPASDTNLLALD 103

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197 113 SSAagSATNVGVQILDRTGAALALDGATfSSETTLNNGTNTIPFQARYFATGAATP-GAANADATFKVQY 181
Cdd:PRK09934 104 DPA--MAQTVAIEIRDSDRSRLALGQAS-PTVEVDANGNATLNFYANYIALADGVQpGVAKADATFMINY 170
lpfA PRK15289
fimbrial protein; Provisional
 31-182 1.87e-12

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 62.67  E-value: 1.87e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVaTKAAVAFLGTaiDATHTD-VL 109
Cdd:PRK15289  26 GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATY-TQAAVRFDGT--EAPGGDgDL 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197 110 ALQS-------------SAAGSATNVGVQILDRTGAALALDGATFSSETTLNNGTNTIPFQARYFATGAATPG-AANADA 175
Cdd:PRK15289 103 KVGTpltagnpgdftgtGQAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEMKFIARYVATNATVTAgTANADS 182


                 ....*..
gi 446618197 176 TFKVQYQ 182
Cdd:PRK15289 183 QFTVEYK 189
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 27-181 1.14e-10

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 57.41  E-value: 1.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  27 TVNGGTVHFKGEVVNAACAVDAGSVDQTVQlgQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTaIDATHT 106
Cdd:PRK15300  25 TAKDGTVHITGLIKQNACTVKTDSVEVTLQ--EEFASLFTAAGQTAGDTDFTIELENCDANVYSSVQARFEGT-LDGTDA 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197 107 DVLALQssaaGSATNVGVQILDRTGAALAL-DGATFSSETTLNNG----TNTIPFQARYFATGA-ATPGAANADATFKVQ 180
Cdd:PRK15300 102 TILKNE----DDAENIGVQILDKTSTPMTFnDLQAWSAAVALPTAegvtELSMPFTARYIATAVpVKSGTVDATATFYLQ 177


                 .
gi 446618197 181 Y 181
Cdd:PRK15300 178 Y 178
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
25-98 1.79e-10

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 56.79  E-value: 1.79e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446618197  25 TTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSS-AVGFNIQLNDCDTTVATKAAVAFLG 98
Cdd:PRK15200  21 PVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPvSVPFSLRLISCSAEVWRHVGIAFAG 95
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 33-182 2.80e-08

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 51.24  E-value: 2.80e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  33 VHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVaTKAAVAFLGTAiDATHTDVLALQ 112
Cdd:PRK15190  30 LEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGI-AGAKIWFTGEP-DPDNPALLAIT 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446618197 113 SSAAGS----ATNVGVQILDRTGAALALDGATfSSETTLNNGTNTIPFQARYfATGAATPGAANADAT--FKVQYQ 182
Cdd:PRK15190 108 DTGMGSgnmlASGVGVEILNDDQDTISINNAD-SVVYPLKAGRNTLSFYIRY-KSTRPTVTSGNATAVmyFDMQYE 181
PRK15210 PRK15210
fimbrial protein;
31-181 7.82e-08

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 50.08  E-value: 7.82e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDC-----DTTVA------TKAAVAFLGT 99
Cdd:PRK15210  35 GKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCafdpnIPDTAgsagkmSKVTVSFSGT 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197 100 AidathtDVLALQSSAAGSATNVGVQILDRTGAALALDGATF--SSETTLNNGTNTIPFQARYFATGAATP-GAANADAT 176
Cdd:PRK15210 115 A------NTSKKAYTTSGSAQHVGVQLLKSDNTSIIEPNTPMpdGDAQQLQAGNNELNFFARLIALDNGVTpGDFNASVT 188


                 ....*
gi 446618197 177 FKVQY 181
Cdd:PRK15210 189 YTLKY 193
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 33-182 2.06e-07

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 48.54  E-value: 2.06e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  33 VHFKGEVVNAAC--AVDAGSVdQTVQLGQVRTASLKQAGATSSaVGFNIQLNDCDTTVATKAAVAFLGTAiDATHTDVLA 110
Cdd:PRK15260  31 VHYSGKLVAGACnlVVDNDTM-ATVDFHTIGSDNFDASGQTTP-VPFTLSLQDCKTALANGVLVTFQGVE-DSTLPGLLA 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446618197 111 LQSSAAGSATNVGVQILDRTGAALaldGATFSSETTLNNGTNTIPFQARY--FATGAATPGAANADATFKVQYQ 182
Cdd:PRK15260 108 LEPSSEASGFAIGVETAAQQPVSI---NATVGTAFVLKEGITTINLQARLqkYAGEEVMPGEFSGSATVSFEYQ 178
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 31-182 2.55e-07

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 48.31  E-value: 2.55e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  31 GTVHFKGEVVNAACAVDAGSVDqtVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTtvATKAAVAFLGTAiDATHTDVLA 110
Cdd:PRK15205  30 GDIHFTITIKAKACELEKDSLE--VDMGTMVLQKPVKVGTELNQKNFSIGLKDCDG--ISKASVTMDGSP-DPDDPSLFA 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446618197 111 LQssaAGSATNVGVQILDRTGAALALDGATFSS-ETTLN-NGTNTIPFQARYFATGAATPG-AANADATFKVQYQ 182
Cdd:PRK15205 105 LD---AGGATGVALKIKTSKGTQQYPKSTDGTPvEWAINgDGTTQLNYIASYVPVNADATVgTANATVNFSVTYE 176
PRK15293 PRK15293
fimbrial protein SthD;
37-161 1.85e-06

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 46.21  E-value: 1.85e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  37 GEVVNAACAVDAGSvdqTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVaTKAAVAFLGTAIDATHTDVLALQSSAA 116
Cdd:PRK15293  41 GLIYADPCTVTVPD---TLSLGQYARADIAVAGGNTATIPFTIKMTNCPATT-TKAAISFNGVPYPDPNYASAIYANSAA 116

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 446618197 117 GSATNVGVQILDRTGAALA--LDGATFSSETTLNNGTNTIPFQARYF 161
Cdd:PRK15293 117 NPAQDLGLQLFNLDGKSLVnlANNVTYTVDINSNTHEANLPVAARMY 163
PRK15283 PRK15283
fimbrial major subunit StfA;
29-148 7.78e-06

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 44.38  E-value: 7.78e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  29 NGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLkQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAIDAT-HTD 107
Cdd:PRK15283  27 NTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSL-MGGKESSKVDFHIGLENCAFTTEKEASTVFSAIGNESSaNPG 105

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 446618197 108 VLALQSSAAGSATNVGVQILDRTGAALALdGATFSSETTLN 148
Cdd:PRK15283 106 SVALMRIGGGEMAGSSIVIGNHLGSAIKL-GDAYSENLTMN 145
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 31-182 1.05e-05

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 43.94  E-value: 1.05e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTvATKAAVAFLGTAiDATHTDVLA 110
Cdd:PRK15191  23 GRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGST-ASGVTVSFSGAA-DSRNTDLLA 100

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446618197 111 LqSSAAGSATNVGVQILDRTGAALALDGATFSSETTLNNGTNTIPFQARYFATGAATPGA-ANADATFKVQYQ 182
Cdd:PRK15191 101 L-TAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGAVTPGdANASATFILAYE 172
PRK15296 PRK15296
fimbrial protein SthA;
32-126 6.08e-05

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 41.61  E-value: 6.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618197  32 TVHFKGEVVNAACAVDA-GSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDC---DTTVATKAAVAFLGTAIDATHTD 107
Cdd:PRK15296  25 TITFNGKIYDQACTVQVnGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCpeaGTGVPTQAMFRFHGATDDSNPTY 104

                         90
                 ....*....|....*....
gi 446618197 108 VLALQSSAAGSATNVGVQI 126
Cdd:PRK15296 105 FKNADEGSETGAAGVGISI 123
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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