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Conserved domains on  [gi|446618201|ref|WP_000695547|]
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type 1 fimbrial major subunit FimA [Escherichia coli]

Protein Classification

fimbrial protein( domain architecture ID 646)

fimbrial protein similar to the type-1 fimbrial major subunit FimA, which is transported to the outer membrane by the lipoprotein sorting system, and a mature or processed FimA protein on the outer membrane is autopolymerized to form Fim fimbriae

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fimbrial super family cl01416
Fimbrial protein;
1-182 2.44e-44

Fimbrial protein;


The actual alignment was detected with superfamily member PRK15194:

Pssm-ID: 445401  Cd Length: 185  Bit Score: 145.10  E-value: 2.44e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201   1 MKIKTLAIVVLSALSLSSAAALADTTT--VNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFN 78
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADPTPvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  79 IQLNDCDTTVATKAAVAFLGTAiDATRTDVLALQSSAAG-SATNVGVQILDRTGNALTLDGATFSVQTTLNNGTNTIPFQ 157
Cdd:PRK15194  81 IQLNDCDPVVAATAAVAFSGQA-DATNDNLLAVASSTNTtTATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFS 159

                        170       180
                 ....*....|....*....|....*.
gi 446618201 158 ARYYAIG-EATPGAANADATFKVQYQ 182
Cdd:PRK15194 160 ARYKATGtSASAGQANADATFIMKYE 185
 
Name Accession Description Interval E-value
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-182 2.44e-44

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 145.10  E-value: 2.44e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201   1 MKIKTLAIVVLSALSLSSAAALADTTT--VNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFN 78
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADPTPvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  79 IQLNDCDTTVATKAAVAFLGTAiDATRTDVLALQSSAAG-SATNVGVQILDRTGNALTLDGATFSVQTTLNNGTNTIPFQ 157
Cdd:PRK15194  81 IQLNDCDPVVAATAAVAFSGQA-DATNDNLLAVASSTNTtTATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFS 159

                        170       180
                 ....*....|....*....|....*.
gi 446618201 158 ARYYAIG-EATPGAANADATFKVQYQ 182
Cdd:PRK15194 160 ARYKATGtSASAGQANADATFIMKYE 185
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
24-182 2.61e-39

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 131.70  E-value: 2.61e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  24 DTTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAiDA 103
Cdd:COG3539   17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTA-DS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201 104 TRTDVLALqsSAAGSATNVGVQILDRTGNALTLDGATfSVQTTLNNGTNTIPFQARYYAIG-EATPGAANADATFKVQYQ 182
Cdd:COG3539   96 ANPGLLAN--TGSGGASGVGIQLLDSDGTPIPLGTPS-SAVTLTSNGSATLPFYARYVATGaTVTAGSFNATATFTIDYQ 172
Fimbrial pfam00419
Fimbrial protein;
33-182 6.63e-23

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 89.03  E-value: 6.63e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201   33 VHFKGEV--VNAACAVDAGSVDqTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAIDATRTdvLA 110
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPN--LL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446618201  111 LQSSAAGSATNVGVQILDRTGNALTLDGATFSVQTTLNNGTNT-IPFQARYYAI--GEATPGAANADATFKVQYQ 182
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATgITFTASLVATtgGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-182 2.44e-44

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 145.10  E-value: 2.44e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201   1 MKIKTLAIVVLSALSLSSAAALADTTT--VNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFN 78
Cdd:PRK15194   1 MKLRFISSAIASLLFVAGAAYAADPTPvsVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  79 IQLNDCDTTVATKAAVAFLGTAiDATRTDVLALQSSAAG-SATNVGVQILDRTGNALTLDGATFSVQTTLNNGTNTIPFQ 157
Cdd:PRK15194  81 IQLNDCDPVVAATAAVAFSGQA-DATNDNLLAVASSTNTtTATGVGIEILDNTSSILKPDGATFSANQNLIEGTNTLHFS 159

                        170       180
                 ....*....|....*....|....*.
gi 446618201 158 ARYYAIG-EATPGAANADATFKVQYQ 182
Cdd:PRK15194 160 ARYKATGtSASAGQANADATFIMKYE 185
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
24-182 2.61e-39

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 131.70  E-value: 2.61e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  24 DTTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAiDA 103
Cdd:COG3539   17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTA-DS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201 104 TRTDVLALqsSAAGSATNVGVQILDRTGNALTLDGATfSVQTTLNNGTNTIPFQARYYAIG-EATPGAANADATFKVQYQ 182
Cdd:COG3539   96 ANPGLLAN--TGSGGASGVGIQLLDSDGTPIPLGTPS-SAVTLTSNGSATLPFYARYVATGaTVTAGSFNATATFTIDYQ 172
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 24-181 2.47e-23

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 91.03  E-value: 2.47e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  24 DTTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAG-ATSSAVGFNIQLNDCDTTVATKAAVAFLGTAiD 102
Cdd:PRK15187  25 DTTTVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGmVANQKEDFTIKLEDCDTQTSQNAAVIFNGQQ-D 103

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446618201 103 ATRTDVLAlQSSAAGSATNVGVQILDRTGNALTLDGATFSVqtTLNNGTNTIPFQARYYAIGEATPGAANADATFKVQY 181
Cdd:PRK15187 104 ANQPGSLA-NTAGAGSATNVALQLYGPDGQALNIGESSSTV--TLNDGENVIPLSVDYIATGTATAGNVTATATFSMVY 179
Fimbrial pfam00419
Fimbrial protein;
33-182 6.63e-23

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 89.03  E-value: 6.63e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201   33 VHFKGEV--VNAACAVDAGSVDqTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAIDATRTdvLA 110
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPN--LL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446618201  111 LQSSAAGSATNVGVQILDRTGNALTLDGATFSVQTTLNNGTNT-IPFQARYYAI--GEATPGAANADATFKVQYQ 182
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATgITFTASLVATtgGTPTAGDFNATATIVVDYQ 152
PRK09733 PRK09733
fimbrial-like protein;
31-182 1.81e-20

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 83.46  E-value: 1.81e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKqAGATSSAVGFNIQLNDC----DTTVATKAAVAFLGTAIDATRT 106
Cdd:PRK09733  26 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLK-SDQKSLAEPFTIHLQDCmlsqGGTTYSKAKVTFTTANTMTGQS 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446618201 107 DVLA-LQSSAAGSATNVGVQILDRTGNALTLdGATFSVQTTLNNGTNTIPFQARYYAIG-EATPGAANADATFKVQYQ 182
Cdd:PRK09733 105 DLLKnTKETEIGGATGVGVRILDSQSGEVTL-GTPVVITFNNTNSYQELNFKARMESPSkDATPGNVYAQADYKIAYE 181
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 31-182 3.24e-20

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 82.71  E-value: 3.24e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAiDATRTDVLA 110
Cdd:PRK15209  26 GTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDITTNKKVNVSFNGVG-DADDSTLVS 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446618201 111 LqSSAAGSATNVGVQILDRTGNALTLDGATFSvqTTLNNGTNTIPFQARYYAIGEA-TPGAANADATFKVQYQ 182
Cdd:PRK15209 105 V-STEAGAATGVGIGIYDNANTLVELNTGKST--TTLAAGQTVLYFTANYVSTKDTvTTGYGNAEVDFNLSYE 174
PRK09934 PRK09934
fimbriae assembly protein;
33-181 6.68e-17

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 74.16  E-value: 6.68e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  33 VHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCdttvaTKAAVAFLGTAIDATRTDVLALQ 112
Cdd:PRK09934  29 IELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGC-----PPGSASITFTGTPASDTNLLALD 103

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201 113 SSAagSATNVGVQILDRTGNALTLDGATFSVQTTlNNGTNTIPFQARYYAIGEAT-PGAANADATFKVQY 181
Cdd:PRK09934 104 DPA--MAQTVAIEIRDSDRSRLALGQASPTVEVD-ANGNATLNFYANYIALADGVqPGVAKADATFMINY 170
lpfA PRK15289
fimbrial protein; Provisional
 31-182 1.31e-15

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 71.14  E-value: 1.31e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVaTKAAVAFLGTAIDATRTDVLA 110
Cdd:PRK15289  26 GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATY-TQAAVRFDGTEAPGGDGDLKV 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201 111 ------------LQSSAAGSATNVGVQILDRTGNA---LTLDGATFSVQTtlnNGTNTIPFQARYYAI-GEATPGAANAD 174
Cdd:PRK15289 105 gtpltagnpgdfTGTGQAIAATGVGIRIFNQSDNSqvkLYNDSAYTAIDA---EGKAEMKFIARYVATnATVTAGTANAD 181


                 ....*...
gi 446618201 175 ATFKVQYQ 182
Cdd:PRK15289 182 SQFTVEYK 189
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
25-181 5.11e-14

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 66.42  E-value: 5.11e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  25 TTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSS-AVGFNIQLNDCDTTVATKAAVAFLGTAiDA 103
Cdd:PRK15200  21 PVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPvSVPFSLRLISCSAEVWRHVGIAFAGVT-PA 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201 104 TRTDVLALQSSAAGSAtNVGVQILDRTG-----NALTLDGATFSVQTTlnngtnTIPFQARYYAIGE-ATPGAANADATF 177
Cdd:PRK15200 100 EDPHVFLASGEGIGNA-GIGLALFDDQQrqiipNTLPLHYAPILTSEM------TLHFTARYRAISEnMTPGRIHSEVWF 172


                 ....
gi 446618201 178 KVQY 181
Cdd:PRK15200 173 TLVY 176
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 27-181 1.98e-12

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 62.42  E-value: 1.98e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  27 TVNGGTVHFKGEVVNAACAVDAGSVDQTVQlgQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTaIDATRT 106
Cdd:PRK15300  25 TAKDGTVHITGLIKQNACTVKTDSVEVTLQ--EEFASLFTAAGQTAGDTDFTIELENCDANVYSSVQARFEGT-LDGTDA 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201 107 DVLALQssaaGSATNVGVQILDRTGNALTLD-----GATFSVQTTLNNGTNTIPFQARYyaIGEATP---GAANADATFK 178
Cdd:PRK15300 102 TILKNE----DDAENIGVQILDKTSTPMTFNdlqawSAAVALPTAEGVTELSMPFTARY--IATAVPvksGTVDATATFY 175


                 ...
gi 446618201 179 VQY 181
Cdd:PRK15300 176 LQY 178
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 33-182 5.75e-11

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 58.55  E-value: 5.75e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  33 VHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVaTKAAVAFLGTAiDATRTDVLALQ 112
Cdd:PRK15190  30 LEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGI-AGAKIWFTGEP-DPDNPALLAIT 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446618201 113 SSAAGS----ATNVGVQILDRTGNALTLDGATfSVQTTLNNGTNTIPFQARYYAI-GEATPGAANADATFKVQYQ 182
Cdd:PRK15190 108 DTGMGSgnmlASGVGVEILNDDQDTISINNAD-SVVYPLKAGRNTLSFYIRYKSTrPTVTSGNATAVMYFDMQYE 181
PRK15210 PRK15210
fimbrial protein;
31-181 7.84e-11

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 58.17  E-value: 7.84e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDC-----DTTVA------TKAAVAFLGT 99
Cdd:PRK15210  35 GKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCafdpnIPDTAgsagkmSKVTVSFSGT 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201 100 AidatrtDVLALQSSAAGSATNVGVQILDR------TGNALTLDGATFSVQTtlnnGTNTIPFQARYYAIGEA-TPGAAN 172
Cdd:PRK15210 115 A------NTSKKAYTTSGSAQHVGVQLLKSdntsiiEPNTPMPDGDAQQLQA----GNNELNFFARLIALDNGvTPGDFN 184


                 ....*....
gi 446618201 173 ADATFKVQY 181
Cdd:PRK15210 185 ASVTYTLKY 193
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 31-182 1.25e-10

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 57.55  E-value: 1.25e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  31 GTVHFKGEVVNAACAVDAGSVDqtVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTtvATKAAVAFLGTAiDATRTDVLA 110
Cdd:PRK15205  30 GDIHFTITIKAKACELEKDSLE--VDMGTMVLQKPVKVGTELNQKNFSIGLKDCDG--ISKASVTMDGSP-DPDDPSLFA 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446618201 111 LQssaAGSATNVGVQILDRTGNALTLDGATFS-VQTTLN-NGTNTIPFQARYYAI-GEATPGAANADATFKVQYQ 182
Cdd:PRK15205 105 LD---AGGATGVALKIKTSKGTQQYPKSTDGTpVEWAINgDGTTQLNYIASYVPVnADATVGTANATVNFSVTYE 176
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 33-182 1.13e-09

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 54.70  E-value: 1.13e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  33 VHFKGEVVNAAC--AVDAGSVdQTVQLGQVRTASLKQAGATSSaVGFNIQLNDCDTTVATKAAVAFLGTAiDATRTDVLA 110
Cdd:PRK15260  31 VHYSGKLVAGACnlVVDNDTM-ATVDFHTIGSDNFDASGQTTP-VPFTLSLQDCKTALANGVLVTFQGVE-DSTLPGLLA 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446618201 111 LQSSAAGSATNVGVQILDRTGNALTldgATFSVQTTLNNGTNTIPFQARY--YAIGEATPGAANADATFKVQYQ 182
Cdd:PRK15260 108 LEPSSEASGFAIGVETAAQQPVSIN---ATVGTAFVLKEGITTINLQARLqkYAGEEVMPGEFSGSATVSFEYQ 178
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 31-182 7.18e-09

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 52.41  E-value: 7.18e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  31 GTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTvATKAAVAFLGTAiDATRTDVLA 110
Cdd:PRK15191  23 GRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGST-ASGVTVSFSGAA-DSRNTDLLA 100

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446618201 111 LqSSAAGSATNVGVQILDRTGNALTLDGATFSVQTTLNNGTNTIPFQARYYAIG-EATPGAANADATFKVQYQ 182
Cdd:PRK15191 101 L-TAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGgAVTPGDANASATFILAYE 172
PRK15293 PRK15293
fimbrial protein SthD;
37-182 5.44e-08

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 50.44  E-value: 5.44e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  37 GEVVNAACAVDAGSvdqTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVaTKAAVAFLGTAIDATRTDVLALQSSAA 116
Cdd:PRK15293  41 GLIYADPCTVTVPD---TLSLGQYARADIAVAGGNTATIPFTIKMTNCPATT-TKAAISFNGVPYPDPNYASAIYANSAA 116

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446618201 117 GSATNVGVQILDRTGNALT--LDGATFSVQTTLNNGTNTIPFQARYYA-IGEATPGAANADATFKVQYQ 182
Cdd:PRK15293 117 NPAQDLGLQLFNLDGKSLVnlANNVTYTVDINSNTHEANLPVAARMYTpYGKVTAGDFTSVVTITIAWQ 185
PRK15296 PRK15296
fimbrial protein SthA;
32-182 2.46e-07

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 48.55  E-value: 2.46e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  32 TVHFKGEVVNAACAVDA-GSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDC---DTTVATKAAVAFLGTAIDATRTD 107
Cdd:PRK15296  25 TITFNGKIYDQACTVQVnGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCpeaGTGVPTQAMFRFHGATDDSNPTY 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446618201 108 VLALQSSAAGSATNVGVQILDRTGNALTLDGATFSVQTTLNNGTNTIPFQARYYAIGEA--TPGAANADATFKVQYQ 182
Cdd:PRK15296 105 FKNADEGSETGAAGVGISIQNASHSDVTDNTDDAAVNLPTDGSTADFTYYAAMANDGSAtvTGGDVSTQVTYTVSYQ 181
PRK15283 PRK15283
fimbrial major subunit StfA;
29-148 1.47e-05

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 43.60  E-value: 1.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446618201  29 NGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLkQAGATSSAVGFNIQLNDCDTTVATKAAVAF--LGTAIDATRT 106
Cdd:PRK15283  27 NTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSL-MGGKESSKVDFHIGLENCAFTTEKEASTVFsaIGNESSANPG 105

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446618201 107 DVLALQ---SSAAGSATNVG------VQILDRTGNALTLDGATFSVQTTLN 148
Cdd:PRK15283 106 SVALMRiggGEMAGSSIVIGnhlgsaIKLGDAYSENLTMNGSVAAAKQTLN 156
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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