NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|446625430|ref|WP_000702776|]
View 

MULTISPECIES: glycosyltransferase family 2 protein [Staphylococcus]

Protein Classification

glycosyltransferase family 2 protein( domain architecture ID 10135621)

glycosyltransferase family 2 protein catalyzes the transfer of saccharide moieties from a donor to an acceptor to form glycosidic bonds

CAZY:  GT2
EC:  2.4.-.-
Gene Ontology:  GO:0016757
SCOP:  3000077

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
DPM1_like_bac cd04187
Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes ...
5-191 2.91e-74

Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.


:

Pssm-ID: 133030 [Multi-domain]  Cd Length: 181  Bit Score: 226.59  E-value: 2.91e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQTHQQLTEILSQDssvkGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGY 84
Cdd:cd04187    1 IVVPVYNEEENLPELYERLKAVLESL----GYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFGQQAALLAGL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  85 QHSTeFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLSHLYYKLVNcFVEEVQFDDGVGDFRLL 164
Cdd:cd04187   77 DHAR-GDAVITMDADLQDPPELIPEMLAKWEEGYDVVYGVRKNRKESWLKRLTSKLFYRLIN-KLSGVDIPDNGGDFRLM 154
                        170       180
                 ....*....|....*....|....*..
gi 446625430 165 SQRAVKSIASLEEYNRFSKGLFEWIGY 191
Cdd:cd04187  155 DRKVVDALLLLPERHRFLRGLIAWVGF 181
 
Name Accession Description Interval E-value
DPM1_like_bac cd04187
Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes ...
5-191 2.91e-74

Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133030 [Multi-domain]  Cd Length: 181  Bit Score: 226.59  E-value: 2.91e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQTHQQLTEILSQDssvkGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGY 84
Cdd:cd04187    1 IVVPVYNEEENLPELYERLKAVLESL----GYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFGQQAALLAGL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  85 QHSTeFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLSHLYYKLVNcFVEEVQFDDGVGDFRLL 164
Cdd:cd04187   77 DHAR-GDAVITMDADLQDPPELIPEMLAKWEEGYDVVYGVRKNRKESWLKRLTSKLFYRLIN-KLSGVDIPDNGGDFRLM 154
                        170       180
                 ....*....|....*....|....*..
gi 446625430 165 SQRAVKSIASLEEYNRFSKGLFEWIGY 191
Cdd:cd04187  155 DRKVVDALLLLPERHRFLRGLIAWVGF 181
PRK10714 PRK10714
undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
2-319 5.55e-44

undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional


Pssm-ID: 182669 [Multi-domain]  Cd Length: 325  Bit Score: 153.35  E-value: 5.55e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   2 KIRVVIPCFNEGEVITQTHQQLTEILSQdssvKGYDYNMLFIDDGSTDTTIDEMQHLATI-DRHVSFISFSRNFGKEAAM 80
Cdd:PRK10714   7 KVSVVIPVYNEQESLPELIRRTTAACES----LGKEYEILLIDDGSSDNSAEMLVEAAQApDSHIVAILLNRNYGQHSAI 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  81 IAGYQHSTEfDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLShlyyKLVNCFVEEVQfDDGVGD 160
Cdd:PRK10714  83 MAGFSHVTG-DLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTAS----KMINRLIQRTT-GKAMGD 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430 161 F----RLLSQRAVKSIASLEEYNRFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIY 236
Cdd:PRK10714 157 YgcmlRAYRRHIVDAMLHCHERSTFIPILANTFARRAIEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSL 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430 237 LGLFI----FSISVLYIIY-LFINIMISGvniPGYFSTIAAILLLGGIQLISIGVVGEYIGRIYYEVKARPKYIIQ---- 307
Cdd:PRK10714 237 LGSIIaiggFSLAVLLVVLrLTFGPQWAA---EGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYNDVRARPRYFVQqvvr 313
                        330
                 ....*....|..
gi 446625430 308 ATNLSSIENDEK 319
Cdd:PRK10714 314 PSSTSNNEKENE 325
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
1-218 1.97e-36

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 130.21  E-value: 1.97e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   1 MKIRVVIPCFNEGEVITQThqqLTEILSQDssvkGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAM 80
Cdd:COG0463    2 PLVSVVIPTYNEEEYLEEA---LESLLAQT----YPDFEIIVVDDGSTDGTAEILRELAAKDPRIRVIRLERNRGKGAAR 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  81 IAGYQHSTeFDAVIMIDCDLQHPPEYIPKMVEGFME-GYDQVIAKRD-RSGENFSRKTLSHLYYkLVNCFVEevqFDDGV 158
Cdd:COG0463   75 NAGLAAAR-GDYIAFLDADDQLDPEKLEELVAALEEgPADLVYGSRLiREGESDLRRLGSRLFN-LVRLLTN---LPDST 149
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430 159 GDFRLLSQRAVKSIASLEEYnRFSKGLFEWIGYNTKVfTYQNVARQKGESKWSFKKLFNY 218
Cdd:COG0463  150 SGFRLFRREVLEELGFDEGF-LEDTELLRALRHGFRI-AEVPVRYRAGESKLNLRDLLRL 207
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
5-170 4.37e-26

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 101.70  E-value: 4.37e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430    5 VVIPCFNEGEVITQThqqLTEILSQDssvkGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGY 84
Cdd:pfam00535   2 VIIPTYNEEKYLLET---LESLLNQT----YPNFEIIVVDDGSTDGTVEIAEEYAKKDPRVRVIRLPENRGKAGARNAGL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   85 QHSTEfDAVIMIDCDLQHPPEYIPKMVEGFME-GYDQVIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFD-----DGV 158
Cdd:pfam00535  75 RAATG-DYIAFLDADDEVPPDWLEKLVEALEEdGADVVVGSRYVIFGETGEYRRASRITLSRLPFFLGLRLLglnlpFLI 153
                         170
                  ....*....|..
gi 446625430  159 GDFRLLSQRAVK 170
Cdd:pfam00535 154 GGFALYRREALE 165
 
Name Accession Description Interval E-value
DPM1_like_bac cd04187
Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes ...
5-191 2.91e-74

Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133030 [Multi-domain]  Cd Length: 181  Bit Score: 226.59  E-value: 2.91e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQTHQQLTEILSQDssvkGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGY 84
Cdd:cd04187    1 IVVPVYNEEENLPELYERLKAVLESL----GYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFGQQAALLAGL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  85 QHSTeFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLSHLYYKLVNcFVEEVQFDDGVGDFRLL 164
Cdd:cd04187   77 DHAR-GDAVITMDADLQDPPELIPEMLAKWEEGYDVVYGVRKNRKESWLKRLTSKLFYRLIN-KLSGVDIPDNGGDFRLM 154
                        170       180
                 ....*....|....*....|....*..
gi 446625430 165 SQRAVKSIASLEEYNRFSKGLFEWIGY 191
Cdd:cd04187  155 DRKVVDALLLLPERHRFLRGLIAWVGF 181
DPM_DPG-synthase_like cd04179
DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the ...
5-191 5.98e-55

DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133022 [Multi-domain]  Cd Length: 185  Bit Score: 177.38  E-value: 5.98e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQTHQQLTEILSQdssvkGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGY 84
Cdd:cd04179    1 VVIPAYNEEENIPELVERLLAVLEE-----GYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFGKGAAVRAGF 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  85 QHSTEfDAVIMIDCDLQHPPEYIPKMVEGFME-GYDQVIAKR----DRSGENFSRKTLSHLYYKLVNcFVEEVQFDDGVG 159
Cdd:cd04179   76 KAARG-DIVVTMDADLQHPPEDIPKLLEKLLEgGADVVIGSRfvrgGGAGMPLLRRLGSRLFNFLIR-LLLGVRISDTQS 153
                        170       180       190
                 ....*....|....*....|....*....|..
gi 446625430 160 DFRLLSQRAVKSIASLEEYNRFSKGLFEWIGY 191
Cdd:cd04179  154 GFRLFRREVLEALLSLLESNGFEFGLELLVGA 185
PRK10714 PRK10714
undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
2-319 5.55e-44

undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional


Pssm-ID: 182669 [Multi-domain]  Cd Length: 325  Bit Score: 153.35  E-value: 5.55e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   2 KIRVVIPCFNEGEVITQTHQQLTEILSQdssvKGYDYNMLFIDDGSTDTTIDEMQHLATI-DRHVSFISFSRNFGKEAAM 80
Cdd:PRK10714   7 KVSVVIPVYNEQESLPELIRRTTAACES----LGKEYEILLIDDGSSDNSAEMLVEAAQApDSHIVAILLNRNYGQHSAI 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  81 IAGYQHSTEfDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLShlyyKLVNCFVEEVQfDDGVGD 160
Cdd:PRK10714  83 MAGFSHVTG-DLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTAS----KMINRLIQRTT-GKAMGD 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430 161 F----RLLSQRAVKSIASLEEYNRFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIY 236
Cdd:PRK10714 157 YgcmlRAYRRHIVDAMLHCHERSTFIPILANTFARRAIEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSL 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430 237 LGLFI----FSISVLYIIY-LFINIMISGvniPGYFSTIAAILLLGGIQLISIGVVGEYIGRIYYEVKARPKYIIQ---- 307
Cdd:PRK10714 237 LGSIIaiggFSLAVLLVVLrLTFGPQWAA---EGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYNDVRARPRYFVQqvvr 313
                        330
                 ....*....|..
gi 446625430 308 ATNLSSIENDEK 319
Cdd:PRK10714 314 PSSTSNNEKENE 325
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
1-218 1.97e-36

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 130.21  E-value: 1.97e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   1 MKIRVVIPCFNEGEVITQThqqLTEILSQDssvkGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAM 80
Cdd:COG0463    2 PLVSVVIPTYNEEEYLEEA---LESLLAQT----YPDFEIIVVDDGSTDGTAEILRELAAKDPRIRVIRLERNRGKGAAR 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  81 IAGYQHSTeFDAVIMIDCDLQHPPEYIPKMVEGFME-GYDQVIAKRD-RSGENFSRKTLSHLYYkLVNCFVEevqFDDGV 158
Cdd:COG0463   75 NAGLAAAR-GDYIAFLDADDQLDPEKLEELVAALEEgPADLVYGSRLiREGESDLRRLGSRLFN-LVRLLTN---LPDST 149
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430 159 GDFRLLSQRAVKSIASLEEYnRFSKGLFEWIGYNTKVfTYQNVARQKGESKWSFKKLFNY 218
Cdd:COG0463  150 SGFRLFRREVLEELGFDEGF-LEDTELLRALRHGFRI-AEVPVRYRAGESKLNLRDLLRL 207
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
5-170 4.37e-26

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 101.70  E-value: 4.37e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430    5 VVIPCFNEGEVITQThqqLTEILSQDssvkGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGY 84
Cdd:pfam00535   2 VIIPTYNEEKYLLET---LESLLNQT----YPNFEIIVVDDGSTDGTVEIAEEYAKKDPRVRVIRLPENRGKAGARNAGL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   85 QHSTEfDAVIMIDCDLQHPPEYIPKMVEGFME-GYDQVIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFD-----DGV 158
Cdd:pfam00535  75 RAATG-DYIAFLDADDEVPPDWLEKLVEALEEdGADVVVGSRYVIFGETGEYRRASRITLSRLPFFLGLRLLglnlpFLI 153
                         170
                  ....*....|..
gi 446625430  159 GDFRLLSQRAVK 170
Cdd:pfam00535 154 GGFALYRREALE 165
DPM1_like cd06442
DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to ...
5-218 1.06e-22

DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133062 [Multi-domain]  Cd Length: 224  Bit Score: 94.14  E-value: 1.06e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQTHQQLteilsqDSSVKGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGY 84
Cdd:cd06442    1 IIIPTYNERENIPELIERL------DAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGKRGLGSAYIEGF 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  85 QHSTEfDAVIMIDCDLQHPPEYIPKMVE-GFMEGYDQVIAKR-----DRSGENFSRKTLS---HLYYKLvncfVEEVQFD 155
Cdd:cd06442   75 KAARG-DVIVVMDADLSHPPEYIPELLEaQLEGGADLVIGSRyveggGVEGWGLKRKLISrgaNLLARL----LLGRKVS 149
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446625430 156 DGVGDFRLLSQRAVKSIASLEEYNRFsKGLFEWI------GYNTKVFTYQNVARQKGESKWSFKKLFNY 218
Cdd:cd06442  150 DPTSGFRAYRREVLEKLIDSLVSKGY-KFQLELLvrarrlGYRIVEVPITFVDREHGESKLGGKEIVEY 217
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
5-286 1.11e-17

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 81.71  E-value: 1.11e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQThqqLTEILSQDssVKGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGY 84
Cdd:COG1215   33 VIIPAYNEEAVIEET---LRSLLAQD--YPKEKLEVIVVDDGSTDETAEIARELAAEYPRVRVIERPENGGKAAALNAGL 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430  85 QHSTeFDAVIMIDCDLQHPPEYIPKMVEGFMEgyDQVIAkrdrSGEN--FSRKTLshlyyKLVNCFVEEVQFDDgvgdfR 162
Cdd:COG1215  108 KAAR-GDIVVFLDADTVLDPDWLRRLVAAFAD--PGVGA----SGANlaFRREAL-----EEVGGFDEDTLGED-----L 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430 163 LLSQRAVKS---IASLEE---YNRFSKGLFEWIgyntkvftyqnvaRQKgeSKWSfKKLFNYGIDGLISFNSKPLRMMIY 236
Cdd:COG1215  171 DLSLRLLRAgyrIVYVPDavvYEEAPETLRALF-------------RQR--RRWA-RGGLQLLLKHRPLLRPRRLLLFLL 234
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 446625430 237 LGLFIFSISVLYIIYLFINIMISGVNIPGYFSTIAAILLLGGIQLISIGV 286
Cdd:COG1215  235 LLLLPLLLLLLLLALLALLLLLLPALLLALLLALRRRRLLLPLLHLLYGL 284
CESA_like cd06423
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ...
5-123 3.60e-15

CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.


Pssm-ID: 133045 [Multi-domain]  Cd Length: 180  Bit Score: 72.26  E-value: 3.60e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQThqqLTEILSQDSSvkgyDYNMLFIDDGSTDTTIDEMQHLA-TIDRHVSFISFSRNFGKEAAMIAG 83
Cdd:cd06423    1 IIVPAYNEEAVIERT---IESLLALDYP----KLEVIVVDDGSTDDTLEILEELAaLYIRRVLVVRDKENGGKAGALNAG 73
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 446625430  84 YQHStEFDAVIMIDCDLQHPPEYIPKMVEGFMEGyDQVIA 123
Cdd:cd06423   74 LRHA-KGDIVVVLDADTILEPDALKRLVVPFFAD-PKVGA 111
DPG_synthase cd04188
DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate ...
5-125 9.11e-14

DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.


Pssm-ID: 133031 [Multi-domain]  Cd Length: 211  Bit Score: 69.13  E-value: 9.11e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQThqqLTEILSQDSSVKGYDYNMLFIDDGSTDTTI----DEMQHLATIDRHvsfISFSRNFGKEAAM 80
Cdd:cd04188    1 VVIPAYNEEKRLPPT---LEEAVEYLEERPSFSYEIIVVDDGSKDGTAevarKLARKNPALIRV---LTLPKNRGKGGAV 74
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 446625430  81 IAGYQHSTEfDAVIMIDCDLQHPPEYIPKMVEGFM-EGYDQVIAKR 125
Cdd:cd04188   75 RAGMLAARG-DYILFADADLATPFEELEKLEEALKtSGYDIAIGSR 119
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
5-116 2.06e-11

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 61.37  E-value: 2.06e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQThqqLTEILSQDSSvkgyDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGY 84
Cdd:cd00761    1 VIIPAYNEEPYLERC---LESLLAQTYP----NFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAGL 73
                         90       100       110
                 ....*....|....*....|....*....|..
gi 446625430  85 QHSTeFDAVIMIDCDLQHPPEYIPKMVEGFME 116
Cdd:cd00761   74 KAAR-GEYILFLDADDLLLPDWLERLVAELLA 104
PLN02726 PLN02726
dolichyl-phosphate beta-D-mannosyltransferase
1-138 5.22e-10

dolichyl-phosphate beta-D-mannosyltransferase


Pssm-ID: 215385 [Multi-domain]  Cd Length: 243  Bit Score: 58.94  E-value: 5.22e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   1 MKIRVVIPCFNEGEVITQTHQQLTEILsQDSSvkgyDYNMLFIDDGSTDTTIDEMQHLATI--DRHVSFISFSRNFGKEA 78
Cdd:PLN02726   9 MKYSIIVPTYNERLNIALIVYLIFKAL-QDVK----DFEIIVVDDGSPDGTQDVVKQLQKVygEDRILLRPRPGKLGLGT 83
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446625430  79 AMIAGYQHSTEfDAVIMIDCDLQHPPEYIPKMVEGFME-GYDQVIAKRDRSGE-----NFSRKTLS 138
Cdd:PLN02726  84 AYIHGLKHASG-DFVVIMDADLSHHPKYLPSFIKKQREtGADIVTGTRYVKGGgvhgwDLRRKLTS 148
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
1-112 8.39e-09

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 54.61  E-value: 8.39e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   1 MKIRVVIPCFNEGEVITQThqqLTEILSQDssvkGYDYNMLFIDDGSTDTTIDEMQHLAtiDRHVSFISFSRNFGKEAAM 80
Cdd:COG1216    3 PKVSVVIPTYNRPELLRRC---LESLLAQT----YPPFEVIVVDNGSTDGTAELLAALA--FPRVRVIRNPENLGFAAAR 73
                         90       100       110
                 ....*....|....*....|....*....|..
gi 446625430  81 IAGYQHSTeFDAVIMIDCDLQHPPEYIPKMVE 112
Cdd:COG1216   74 NLGLRAAG-GDYLLFLDDDTVVEPDWLERLLA 104
CESA_like_1 cd06439
CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of ...
2-99 2.55e-06

CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.


Pssm-ID: 133061 [Multi-domain]  Cd Length: 251  Bit Score: 47.96  E-value: 2.55e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   2 KIRVVIPCFNEGEVITQThqqLTEILSQDssvkgY---DYNMLFIDDGSTDTTIDEMQHLAtiDRHVSFISFSRNFGKEA 78
Cdd:cd06439   30 TVTIIIPAYNEEAVIEAK---LENLLALD-----YprdRLEIIVVSDGSTDGTAEIAREYA--DKGVKLLRFPERRGKAA 99
                         90       100
                 ....*....|....*....|....*.
gi 446625430  79 AMIAGYQHSTE----F-DAVIMIDCD 99
Cdd:cd06439  100 ALNRALALATGeivvFtDANALLDPD 125
Succinoglycan_BP_ExoA cd02525
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ...
2-112 3.39e-05

ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.


Pssm-ID: 133016 [Multi-domain]  Cd Length: 249  Bit Score: 44.53  E-value: 3.39e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   2 KIRVVIPCFNEGEVITQThqqLTEILSQDssVKGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISfsrNFGK--EAA 79
Cdd:cd02525    1 FVSIIIPVRNEEKYIEEL---LESLLNQS--YPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLID---NPKRiqSAG 72
                         90       100       110
                 ....*....|....*....|....*....|...
gi 446625430  80 MIAGYQHStEFDAVIMIDCDLQHPPEYIPKMVE 112
Cdd:cd02525   73 LNIGIRNS-RGDIIIRVDAHAVYPKDYILELVE 104
Glyco_tranf_2_3 pfam13641
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
5-111 1.12e-04

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433372 [Multi-domain]  Cd Length: 230  Bit Score: 42.74  E-value: 1.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430    5 VVIPCFNEGEVITQThqqLTEILSQDSSvkgyDYNMLFIDDGSTDTTIDEMQHLATI--DRHVSFISFSRNFG---KEAA 79
Cdd:pfam13641   6 VVVPAFNEDSVLGRV---LEAILAQPYP----PVEVVVVVNPSDAETLDVAEEIAARfpDVRLRVIRNARLLGptgKSRG 78
                          90       100       110
                  ....*....|....*....|....*....|..
gi 446625430   80 MIAGYQHSTeFDAVIMIDCDLQHPPEYIPKMV 111
Cdd:pfam13641  79 LNHGFRAVK-SDLVVLHDDDSVLHPGTLKKYV 109
GT_2_like_e cd04192
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
5-123 3.82e-04

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133035 [Multi-domain]  Cd Length: 229  Bit Score: 41.12  E-value: 3.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQTHQQLTEIlsqdssvkgyDYN-----MLFIDDGSTDTTIDEMQHLATI-DRHVSFISFSR--NFGK 76
Cdd:cd04192    1 VVIAARNEAENLPRLLQSLSAL----------DYPkekfeVILVDDHSTDGTVQILEFAAAKpNFQLKILNNSRvsISGK 70
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 446625430  77 EAAMIAGYQHSTeFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIA 123
Cdd:cd04192   71 KNALTTAIKAAK-GDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVA 116
EpsO_like cd06438
EpsO protein participates in the methanolan synthesis; The Methylobacillus sp EpsO protein is ...
5-126 2.31e-03

EpsO protein participates in the methanolan synthesis; The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.


Pssm-ID: 133060 [Multi-domain]  Cd Length: 183  Bit Score: 38.35  E-value: 2.31e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446625430   5 VVIPCFNEGEVITQThqqLTEILSQDSSVKGYDynMLFIDDGSTDTTidemqhlATIDRHVSFISFSRN----FGKEAAM 80
Cdd:cd06438    1 ILIPAHNEEAVIGNT---VRSLKAQDYPRELYR--IFVVADNCTDDT-------AQVARAAGATVLERHdperRGKGYAL 68
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 446625430  81 IAGYQHS----TEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIAKRD 126
Cdd:cd06438   69 DFGFRHLlnlaDDPDAVVVFDADNLVDPNALEELNARFAAGARVVQAYYN 118
GT_2_like_a cd02522
GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; ...
3-52 9.87e-03

GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133013 [Multi-domain]  Cd Length: 221  Bit Score: 36.78  E-value: 9.87e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 446625430   3 IRVVIPCFNEGEVITQTHQQLTEILSQDSSVkgydynmLFIDDGSTDTTI 52
Cdd:cd02522    1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEI-------IVVDGGSTDGTV 43
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH