MULTISPECIES: helix-turn-helix domain-containing protein [Gammaproteobacteria]
winged helix-turn-helix domain-containing protein( domain architecture ID 28424)
winged helix-turn-helix (wHTH) domain-containing protein binds DNA and may function as a transcriptional regulator
List of domain hits
Name | Accession | Description | Interval | E-value | ||
HTH_43 super family | cl11547 | Winged helix-turn helix; This family, found in various hypothetical prokaryotic proteins, is a ... |
24-80 | 9.49e-07 | ||
Winged helix-turn helix; This family, found in various hypothetical prokaryotic proteins, is a probable winged helix DNA-binding domain. The actual alignment was detected with superfamily member pfam09904: Pssm-ID: 472215 Cd Length: 89 Bit Score: 42.68 E-value: 9.49e-07
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Name | Accession | Description | Interval | E-value | ||
HTH_43 | pfam09904 | Winged helix-turn helix; This family, found in various hypothetical prokaryotic proteins, is a ... |
24-80 | 9.49e-07 | ||
Winged helix-turn helix; This family, found in various hypothetical prokaryotic proteins, is a probable winged helix DNA-binding domain. Pssm-ID: 430915 Cd Length: 89 Bit Score: 42.68 E-value: 9.49e-07
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COG4519 | COG4519 | Uncharacterized conserved protein [Function unknown]; |
21-81 | 9.77e-07 | ||
Uncharacterized conserved protein [Function unknown]; Pssm-ID: 443593 Cd Length: 96 Bit Score: 42.64 E-value: 9.77e-07
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Name | Accession | Description | Interval | E-value | ||
HTH_43 | pfam09904 | Winged helix-turn helix; This family, found in various hypothetical prokaryotic proteins, is a ... |
24-80 | 9.49e-07 | ||
Winged helix-turn helix; This family, found in various hypothetical prokaryotic proteins, is a probable winged helix DNA-binding domain. Pssm-ID: 430915 Cd Length: 89 Bit Score: 42.68 E-value: 9.49e-07
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COG4519 | COG4519 | Uncharacterized conserved protein [Function unknown]; |
21-81 | 9.77e-07 | ||
Uncharacterized conserved protein [Function unknown]; Pssm-ID: 443593 Cd Length: 96 Bit Score: 42.64 E-value: 9.77e-07
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YobV | COG2378 | Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains ... |
11-74 | 1.61e-03 | ||
Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains [Transcription]; Pssm-ID: 441945 [Multi-domain] Cd Length: 314 Bit Score: 35.44 E-value: 1.61e-03
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Blast search parameters | ||||
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