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Conserved domains on  [gi|446635637|ref|WP_000712983|]
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MULTISPECIES: NAD(P)/FAD-dependent oxidoreductase [Bacillus]

Protein Classification

phytoene desaturase family protein( domain architecture ID 11440907)

phytoene desaturase family protein is an NAD(P)/FAD-dependent oxidoreductase that catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant; similar to phytoene desaturase, which converts phytoene into 3,4-didehydrolycopene via several intermediates by introducing up to five double bonds into phytoene

CATH:  3.50.50.60
EC:  1.-.-.-
Gene Ontology:  GO:0016491|GO:0009055|GO:0016117|GO:0016116
SCOP:  4000128|3000055

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 1-425 9.27e-34

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


:

Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 131.90  E-value: 9.27e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLTFNELGmnLPGGI 80
Cdd:COG1233    1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFERPGFRFDVGPSVLTMPGVLERLFRELG--LEDYL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  81 PTTKAHGIWK-----GDIFTIPTD---------------------------------FRSILSTPLLSWsakvqfSRLMI 122
Cdd:COG1233   79 ELVPLDPAYRvpfpdGRALDLPRDlertaaelerlfpgdaeayrrflaelrrlydalLEDLLYRPLLSL------RDLLR 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 123 RLGNLDVGEVPKMSLTAWAENEIKDPMVRNIFyalCRTTTYTFAPTIQLASSVLKQIQLSMKEGVLYVDGGWETIITKLR 202
Cdd:COG1233  153 PLALARLLRLLLRSLRDLLRRYFKDPRLRALL---AGQALYLGLSPDRTPALYALIAYLEYAGGVWYPKGGMGALADALA 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 203 DIANNVGVQFLAKKHVLEIEHYEDK-QRIHCFDDEVFEVGTVIVTTPPKEAC-KIIKGAEGTSLHRWSEQSVPVTVAA-- 278
Cdd:COG1233  230 RLAEELGGEIRTGAEVERILVEGGRaTGVRLADGEEIRADAVVSNADPAHTYlRLLGEEALPARYRRRLERFRYSPSAfk 309

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 279 LDIGLRR-LPN-PTHQFVIGLDQPIFFtNQSRAAKLSEDGSIAVSlikyHNTVLE----------------MNHIHEDK- 339
Cdd:COG1233  310 LYLGLDGpLPGlAHHTIHLSEDYEAAF-DDIFRGRLPEDPSLYVS----IPSLTDpslapegkhtlwvlvpVPYGLEDAw 384

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 340 --------EQLESTMELLHPNWKREVVAQQYLPKITVAYDFSHIE----------------RvetPGPNIPEMPGVYVAG 395
Cdd:COG1233  385 delkeeyaERILARLERYAPGLRDRIVAREVLTPLDFERYLNLVGgaiyggahtldqsaffR---PSNYRTPIPGLYLVG 461

                        490       500       510
                 ....*....|....*....|....*....|..
gi 446635637 396 DWT--GQdelLADAAVASGKRAALHILKQLES 425
Cdd:COG1233  462 ASThpGG---GVPGVLISGRLAARRILKDLKR 490
 
Name Accession Description Interval E-value
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 1-425 9.27e-34

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 131.90  E-value: 9.27e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLTFNELGmnLPGGI 80
Cdd:COG1233    1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFERPGFRFDVGPSVLTMPGVLERLFRELG--LEDYL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  81 PTTKAHGIWK-----GDIFTIPTD---------------------------------FRSILSTPLLSWsakvqfSRLMI 122
Cdd:COG1233   79 ELVPLDPAYRvpfpdGRALDLPRDlertaaelerlfpgdaeayrrflaelrrlydalLEDLLYRPLLSL------RDLLR 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 123 RLGNLDVGEVPKMSLTAWAENEIKDPMVRNIFyalCRTTTYTFAPTIQLASSVLKQIQLSMKEGVLYVDGGWETIITKLR 202
Cdd:COG1233  153 PLALARLLRLLLRSLRDLLRRYFKDPRLRALL---AGQALYLGLSPDRTPALYALIAYLEYAGGVWYPKGGMGALADALA 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 203 DIANNVGVQFLAKKHVLEIEHYEDK-QRIHCFDDEVFEVGTVIVTTPPKEAC-KIIKGAEGTSLHRWSEQSVPVTVAA-- 278
Cdd:COG1233  230 RLAEELGGEIRTGAEVERILVEGGRaTGVRLADGEEIRADAVVSNADPAHTYlRLLGEEALPARYRRRLERFRYSPSAfk 309

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 279 LDIGLRR-LPN-PTHQFVIGLDQPIFFtNQSRAAKLSEDGSIAVSlikyHNTVLE----------------MNHIHEDK- 339
Cdd:COG1233  310 LYLGLDGpLPGlAHHTIHLSEDYEAAF-DDIFRGRLPEDPSLYVS----IPSLTDpslapegkhtlwvlvpVPYGLEDAw 384

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 340 --------EQLESTMELLHPNWKREVVAQQYLPKITVAYDFSHIE----------------RvetPGPNIPEMPGVYVAG 395
Cdd:COG1233  385 delkeeyaERILARLERYAPGLRDRIVAREVLTPLDFERYLNLVGgaiyggahtldqsaffR---PSNYRTPIPGLYLVG 461

                        490       500       510
                 ....*....|....*....|....*....|..
gi 446635637 396 DWT--GQdelLADAAVASGKRAALHILKQLES 425
Cdd:COG1233  462 ASThpGG---GVPGVLISGRLAARRILKDLKR 490
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 13-420 1.81e-26

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 110.66  E-value: 1.81e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   13 LAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLT-FNELGMNL-----PGGIPTTKAH 86
Cdd:pfam01593   1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQPPLLAlLKELGLEDrlvlpDPAPFYTVLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   87 ---GIWKGDIFTIPTDFRSILSTP-LLSWSAKVQFSRLMIRLGNLDVGEVPKMSLTAWAE-----NEIKDPMVRNIFYAL 157
Cdd:pfam01593  81 aggRRYPGDFRRVPAGWEGLLEFGrLLSIPEKLRLGLAALASDALDEFDLDDFSLAESLLflgrrGPGDVEVWDRLIDPE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  158 CRT------TTYTFAPTIQLASSVLKQIQLSMKE--GVLYVDGGWETIITKLRDIANNVGVQFLAKkhVLEIEHYEDKQR 229
Cdd:pfam01593 161 LFAalpfasGAFAGDPSELSAGLALPLLWALLGEggSLLLPRGGLGALPDALAAQLLGGDVRLNTR--VRSIDREGDGVT 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  230 IHCFDDEVFEVGTVIVTTPPKEACKIIKGAegtSLHRWSEQSVP----VTVAALDIGLRRLPNPTHQFVIGLDQ------ 299
Cdd:pfam01593 239 VTLTDGEVIEADAVIVTVPLGVLKRILFTP---PLPPEKARAIRnlgyGPVNKVHLEFDRKFWPDLGLLGLLSElltglg 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  300 PIFFTNQSRAAKLSEDGSIAVSLIKYHNTVLEMNHIHEDkEQLESTMELL---------------HPNWKREVVaqqylP 364
Cdd:pfam01593 316 TAFSWLTFPNRAPPGKGLLLLVYVGPGDRARELEGLSDE-ELLQAVLRDLrklfgeeapeplrvlVSDWHTDPW-----P 389

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 446635637  365 KITVAYDFSHIERVETPGPNIPEMPGVYVAGDWTGQDEL-LADAAVASGKRAALHIL 420
Cdd:pfam01593 390 RGSYSLPQYGPGHDDYRPLARTPDPGLFFAGEHTSTGYPgTVEGAIESGRRAARAVL 446
PRK07233 PRK07233
hypothetical protein; Provisional
 6-280 8.07e-15

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 76.08  E-value: 8.07e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLT-FNELGM--NLPGGIPT 82
Cdd:PRK07233   2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASFEFGGLPIERFYHHIFKSDEALLElLDELGLedKLRWRETK 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  83 TkahGIW-KGDI--FTIPTDfrsILSTPLLSWSAKVQFSRLMIRLGNL-DVGEVPKMSLTAWAENEIKDPMVRNIFYALC 158
Cdd:PRK07233  82 T---GYYvDGKLypLGTPLE---LLRFPHLSLIDKFRLGLLTLLARRIkDWRALDKVPAEEWLRRWSGEGVYEVFWEPLL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 159 RTTTYTFAPTIQlASSVLKQIQ-------LSMKEGVLYVDGGWETIITKLRDIANNVGVQFLAKKHVLEIEHYEDKQRIH 231
Cdd:PRK07233 156 ESKFGDYADDVS-AAWLWSRIKrrgnrrySLFGEKLGYLEGGFATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGV 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446635637 232 CFDDEVFEVGTVIVTTPPKEACKIIKGAEGTSLHRWSE---QSVPVTVAALD 280
Cdd:PRK07233 235 EVDGEEEDFDAVISTAPPPILARLVPDLPADVLARLRRidyQGVVCMVLKLR 286
proto_IX_ox TIGR00562
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ...
 5-283 1.45e-09

protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 213540 [Multi-domain]  Cd Length: 462  Bit Score: 59.85  E-value: 1.45e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637    5 DVAIVGGGLAGLTASIYLAK----AGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLTF-NELGM-NLPG 78
Cdd:TIGR00562   4 HVVIIGGGISGLCAAYYLEKeipeLPVELTLVEASDRVGGKIQTVKEDGYLIERGPDSFLERKKSAPDLvKDLGLeHVLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   79 GIPTTKAHGIWK-GDIFTIPTDFRSILSTPLLSWSAKVQFSRLMIRLGNLDVGEvpkmSLTAWAENEIKDPMVRNIFYAL 157
Cdd:TIGR00562  84 SDATGQRYVLVNrGKLMPVPTKIAPFVKTGLFSLGGKLRAGMDFIRPASPGKDE----SVEEFVRRRFGDEVVENLIEPL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  158 CRtTTYTFAPTIQLASSVLKQI-QLSMKEGVLyVDGGWETII----TKLRDIANNVG--VQFLAKK---HVLEIEHYEDK 227
Cdd:TIGR00562 160 LS-GIYAGDPSKLSLKSTFPKFyQTEQKHGSL-ILGMKKTRNlpqgSGLQLTAKKQGqdFQTLATGletLPEEIEKRLKL 237

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446635637  228 QRIHCFDD------------------EVFEVGTVIVTTPPKEACKIIKGAEGTSLHRWSEQSVPvTVAALDIGL 283
Cdd:TIGR00562 238 TKVYKGTKvtklshrgsnytleldngVTVETDSVVVTAPHKAAAGLLSELSNSASSHLDKIHSP-PVANVNLGF 310
 
Name Accession Description Interval E-value
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 1-425 9.27e-34

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 131.90  E-value: 9.27e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLTFNELGmnLPGGI 80
Cdd:COG1233    1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFERPGFRFDVGPSVLTMPGVLERLFRELG--LEDYL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  81 PTTKAHGIWK-----GDIFTIPTD---------------------------------FRSILSTPLLSWsakvqfSRLMI 122
Cdd:COG1233   79 ELVPLDPAYRvpfpdGRALDLPRDlertaaelerlfpgdaeayrrflaelrrlydalLEDLLYRPLLSL------RDLLR 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 123 RLGNLDVGEVPKMSLTAWAENEIKDPMVRNIFyalCRTTTYTFAPTIQLASSVLKQIQLSMKEGVLYVDGGWETIITKLR 202
Cdd:COG1233  153 PLALARLLRLLLRSLRDLLRRYFKDPRLRALL---AGQALYLGLSPDRTPALYALIAYLEYAGGVWYPKGGMGALADALA 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 203 DIANNVGVQFLAKKHVLEIEHYEDK-QRIHCFDDEVFEVGTVIVTTPPKEAC-KIIKGAEGTSLHRWSEQSVPVTVAA-- 278
Cdd:COG1233  230 RLAEELGGEIRTGAEVERILVEGGRaTGVRLADGEEIRADAVVSNADPAHTYlRLLGEEALPARYRRRLERFRYSPSAfk 309

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 279 LDIGLRR-LPN-PTHQFVIGLDQPIFFtNQSRAAKLSEDGSIAVSlikyHNTVLE----------------MNHIHEDK- 339
Cdd:COG1233  310 LYLGLDGpLPGlAHHTIHLSEDYEAAF-DDIFRGRLPEDPSLYVS----IPSLTDpslapegkhtlwvlvpVPYGLEDAw 384

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 340 --------EQLESTMELLHPNWKREVVAQQYLPKITVAYDFSHIE----------------RvetPGPNIPEMPGVYVAG 395
Cdd:COG1233  385 delkeeyaERILARLERYAPGLRDRIVAREVLTPLDFERYLNLVGgaiyggahtldqsaffR---PSNYRTPIPGLYLVG 461

                        490       500       510
                 ....*....|....*....|....*....|..
gi 446635637 396 DWT--GQdelLADAAVASGKRAALHILKQLES 425
Cdd:COG1233  462 ASThpGG---GVPGVLISGRLAARRILKDLKR 490
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 5-423 1.83e-30

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 122.25  E-value: 1.83e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLTF-NELGmnLPGGI--- 80
Cdd:COG1232    3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIRTVEVDGFRIDRGPHSFLTRDPEVLELlRELG--LGDELvwp 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  81 PTTKAHGIWKGDIFTIPTDFRSILSTPLLSWSAKVqfsRLMIRLGNLDVGEVPKMSLTAWAEN----EIKD----PMVRN 152
Cdd:COG1232   81 NTRKSYIYYGGKLHPLPQGPLALLRSPLLSLAGKL---RALLELLAPRRPPGEDESLAEFVRRrfgrEVYErlvePLLEG 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 153 IFYALCRTTTYTFA-PTIQLAS----SVLKQIQLSMKEG-----VLYVDGGWETIITKLRDIANNVGVQFLAKkhVLEIE 222
Cdd:COG1232  158 VYAGDPDELSADWAfPRLKRLElehgSLIKGALALRKGAkagevFGYLRGGLGTLVEALAEALEAGEIRLGTR--VTAIE 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 223 HYEDKQRIHCFDDEVFEVGTVIVTTPPKEACKIIKGAEGTSLHRWSE-QSVPVTVAALdiGLRR--LPNPTHQ-FVIGLD 298
Cdd:COG1232  236 REGGGWRVTTSDGETIEADAVVSATPAPALARLLAPLPPEVAAALAGiPYASVAVVAL--GFDRpdLPPPDGFgWLVPRD 313

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 299 QP------IFFTNQSraAKLSEDGSiaVSLIKY-----HNTVLEMN------HIHEDkeqLESTMELLH-PNWKReVVAQ 360
Cdd:COG1232  314 EGvpilavTFSSNKW--PHRAPDGK--VLLRLEvggagDPELWQLSdeelvaLALAD---LRKLLGIDAePVDTR-VVRW 385

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446635637 361 QY-LPKITVAYDfSHIERVETPgpnIPEMPGVYVAGDW---TGQdellaDAAVASGKRAALHILKQL 423
Cdd:COG1232  386 PKaYPQYTVGHL-ERVAAIREA---LAALPGLYLAGRAydgVGL-----PDCIRSGREAAERILAEL 443
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 13-420 1.81e-26

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 110.66  E-value: 1.81e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   13 LAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLT-FNELGMNL-----PGGIPTTKAH 86
Cdd:pfam01593   1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQPPLLAlLKELGLEDrlvlpDPAPFYTVLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   87 ---GIWKGDIFTIPTDFRSILSTP-LLSWSAKVQFSRLMIRLGNLDVGEVPKMSLTAWAE-----NEIKDPMVRNIFYAL 157
Cdd:pfam01593  81 aggRRYPGDFRRVPAGWEGLLEFGrLLSIPEKLRLGLAALASDALDEFDLDDFSLAESLLflgrrGPGDVEVWDRLIDPE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  158 CRT------TTYTFAPTIQLASSVLKQIQLSMKE--GVLYVDGGWETIITKLRDIANNVGVQFLAKkhVLEIEHYEDKQR 229
Cdd:pfam01593 161 LFAalpfasGAFAGDPSELSAGLALPLLWALLGEggSLLLPRGGLGALPDALAAQLLGGDVRLNTR--VRSIDREGDGVT 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  230 IHCFDDEVFEVGTVIVTTPPKEACKIIKGAegtSLHRWSEQSVP----VTVAALDIGLRRLPNPTHQFVIGLDQ------ 299
Cdd:pfam01593 239 VTLTDGEVIEADAVIVTVPLGVLKRILFTP---PLPPEKARAIRnlgyGPVNKVHLEFDRKFWPDLGLLGLLSElltglg 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  300 PIFFTNQSRAAKLSEDGSIAVSLIKYHNTVLEMNHIHEDkEQLESTMELL---------------HPNWKREVVaqqylP 364
Cdd:pfam01593 316 TAFSWLTFPNRAPPGKGLLLLVYVGPGDRARELEGLSDE-ELLQAVLRDLrklfgeeapeplrvlVSDWHTDPW-----P 389

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 446635637  365 KITVAYDFSHIERVETPGPNIPEMPGVYVAGDWTGQDEL-LADAAVASGKRAALHIL 420
Cdd:pfam01593 390 RGSYSLPQYGPGHDDYRPLARTPDPGLFFAGEHTSTGYPgTVEGAIESGRRAARAVL 446
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 1-425 2.14e-25

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 107.63  E-value: 2.14e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGR---------GMTINkNGICMNLGA-HALYR-----GGAA 65
Cdd:COG3349    1 MMPPRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRarsfpdpdtGLPID-NGQHVLLGCyRNTLDllrriGAAD 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  66 FLTF-NELGMNLPGGIPTTKAHGIWkgdiftiPT---DFRSILSTPLLSWSAKVQFSRLMIRLGNLDVGEVPKMSLTAWA 141
Cdd:COG3349   80 NLVGpEPLQFPLPGGRRWTLRAPRL-------PAplhLLRALLRAPGLSLADRLALLRLLTACRERRWRELDDISVADWL 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 142 ENEIKDPMVRNIF-YALCRTTTYTFAPTI--QLASSVLKQIQLSMKE-----------GVLYVDgGWETIITKLrdiann 207
Cdd:COG3349  153 RRHGQSPRLIRRLwEPLLLAALNTPPEQAsaRLALTVLRETLLAGPAasdllvprgplSELFVD-PALAYLEAR------ 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 208 vGVQFLAKKHVLEIEHYEDK-QRIHCFDDEVFEVGTVIVTTPPKEACKIIKGAEGTSLHRWSEQ--SVPVTVA--ALDig 282
Cdd:COG3349  226 -GGEVRLGTRVRALEFDGGRvTGLVLADGETVPADAVVLAVPPEVAARLLPELARLPELGLLAPleYSPIVNVhlWLD-- 302

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 283 lRRLPNPTHQFVIGLDQPIFFTNQSRAAKLSEDGSIAVSLikYHntvlEMNHIHEDKEQLestmellhpnwKREVVAQ-- 360
Cdd:COG3349  303 -RPVTLGPPPFAGLVGSTSQWVFDRGAGDGGQGGVLSVVI--SA----ADRLLDLSREEL-----------AAEVWAEla 364

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 361 QYLPKI---TVAYDFSHIER----VETPG------PNIPEMPGVYVAGDWTGQD-----ElladAAVASGKRAALHILKQ 422
Cdd:COG3349  365 ALLPAAreaLPVWSRVVREKratfAATPGsdrlrpGARTPIPNLFLAGDWTATGlpatmE----GAVRSGRRAANAILAR 440


                 ...
gi 446635637 423 LES 425
Cdd:COG3349  441 LGR 443
PRK07233 PRK07233
hypothetical protein; Provisional
 6-280 8.07e-15

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 76.08  E-value: 8.07e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLT-FNELGM--NLPGGIPT 82
Cdd:PRK07233   2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASFEFGGLPIERFYHHIFKSDEALLElLDELGLedKLRWRETK 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  83 TkahGIW-KGDI--FTIPTDfrsILSTPLLSWSAKVQFSRLMIRLGNL-DVGEVPKMSLTAWAENEIKDPMVRNIFYALC 158
Cdd:PRK07233  82 T---GYYvDGKLypLGTPLE---LLRFPHLSLIDKFRLGLLTLLARRIkDWRALDKVPAEEWLRRWSGEGVYEVFWEPLL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 159 RTTTYTFAPTIQlASSVLKQIQ-------LSMKEGVLYVDGGWETIITKLRDIANNVGVQFLAKKHVLEIEHYEDKQRIH 231
Cdd:PRK07233 156 ESKFGDYADDVS-AAWLWSRIKrrgnrrySLFGEKLGYLEGGFATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGV 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446635637 232 CFDDEVFEVGTVIVTTPPKEACKIIKGAEGTSLHRWSE---QSVPVTVAALD 280
Cdd:PRK07233 235 EVDGEEEDFDAVISTAPPPILARLVPDLPADVLARLRRidyQGVVCMVLKLR 286
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
1-249 6.08e-13

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 70.34  E-value: 6.08e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMT--INKNGICMNLGAHALYRGGAAFLTF-NELgmnlp 77
Cdd:COG1231    5 ARGKDVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGGRVWTlrFGDDGLYAELGAMRIPPSHTNLLALaREL----- 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  78 gGIPTTKAHGIWKGDIFTI---PTDFRSILSTPLLSWSAKVQFSRLM---IRLGNLDVGEVPKMSLTAWAENEIKDPMVR 151
Cdd:COG1231   80 -GLPLEPFPNENGNALLYLggkRVRAGEIAADLRGVAELLAKLLRALaaaLDPWAHPAAELDRESLAEWLRRNGASPSAR 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 152 NIFYALCRttTYTFAPTIQL-ASSVLKQIQLSMKEGVLY-VDGGWETIITKLrdiANNVG--VQFLAKkhVLEIEHYEDK 227
Cdd:COG1231  159 RLLGLLGA--GEYGADPDELsLLDLLRYAASAGGGAQQFrIVGGMDQLPRAL---AAELGdrIRLGAP--VTRIRQDGDG 231

                        250       260
                 ....*....|....*....|..
gi 446635637 228 QRIHCFDDEVFEVGTVIVTTPP 249
Cdd:COG1231  232 VTVTTDDGGTVRADAVIVTVPP 253
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 6-420 7.49e-13

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 69.88  E-value: 7.49e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGK--KVIVLEKSRRFGGRGMTINKNGICMNLGAHA-LYRGGAAFLTFNELGM-----NLP 77
Cdd:PRK11883   3 VAIIGGGITGLSAAYRLHKKGPdaDITLLEASDRLGGKIQTVRKDGFPIELGPESfLARKPSAPALVKELGLedelvANT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  78 GGIP----TTKAHGIWKGDIFTIPTDFRSILSTPLLSWSAKVqfsRLMIRLGNLDVGEVPKMSLTAWAENEIKDPMVRNI 153
Cdd:PRK11883  83 TGQSyiyvNGKLHPIPPGTVMGIPTSIAPFLFAGLVSPIGKL---RAAADLRPPRWKPGQDQSVGAFFRRRFGDEVVENL 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 154 FYAL-------------CRTTTYTFAPTIQLASSVLKQIQLSM------KEGVLY-VDGGWETIITKLRDIANNVGVQFl 213
Cdd:PRK11883 160 IEPLlsgiyagdidtlsLRATFPQLAQAEDKYGSLLRGMRKALpkekkkTKGVFGtLKGGLQSLIEALEEKLPAGTIHK- 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 214 aKKHVLEIEHYEDKQRIHCFDDEVFEVGTVIVTTPPKEACKIIKGAEGTSLHRWSEQSVPVTVA-ALDIGLRRLPNPThQ 292
Cdd:PRK11883 239 -GTPVTKIDKSGDGYEIVLSNGGEIEADAVIVAVPHPVLPSLFVAPPAFALFKTIPSTSVATVAlAFPESATNLPDGT-G 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 293 FVIGLDQPI---FFTNQSRAAKLSEDGSIAVSLI---KYHNTVLEMnhiHEDKEQLESTMELLhpnwkrevvaQQYLpKI 366
Cdd:PRK11883 317 FLVARNSDYtitACTWTSKKWPHTTPEGKVLLRLyvgRPGDEAVVD---ATDEELVAFVLADL----------SKVM-GI 382

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446635637 367 TVAYDFS---------------HIERVETPGPNIPEMPGVYVAGDWtgqdellAD-----AAVASGKRAALHIL 420
Cdd:PRK11883 383 TGDPEFTivqrwkeampqygvgHIERVAELRAGLPHYPGLYVAGAS-------FEgvglpDCIAQAKRAAARLL 449
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
8-59 2.37e-12

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 61.78  E-value: 2.37e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 446635637    8 IVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHAL 59
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVPGYVFDYGAHIF 52
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
1-41 2.62e-12

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 67.60  E-value: 2.62e-12
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGR 41
Cdd:COG3380    1 MSMPDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGGR 41
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 1-50 1.35e-10

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 62.26  E-value: 1.35e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSR--RFGGRGMTINKNGI 50
Cdd:COG0654    1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPppRPDGRGIALSPRSL 52
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 1-40 5.43e-10

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 61.00  E-value: 5.43e-10
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:COG1053    1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGG 40
PRK07208 PRK07208
hypothetical protein; Provisional
 1-57 8.16e-10

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 60.67  E-value: 8.16e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAH 57
Cdd:PRK07208   2 TNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISRTVTYKGNRFDIGGH 58
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 1-40 1.08e-09

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 59.88  E-value: 1.08e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:COG2072    4 TEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGG 43
proto_IX_ox TIGR00562
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ...
 5-283 1.45e-09

protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 213540 [Multi-domain]  Cd Length: 462  Bit Score: 59.85  E-value: 1.45e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637    5 DVAIVGGGLAGLTASIYLAK----AGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLTF-NELGM-NLPG 78
Cdd:TIGR00562   4 HVVIIGGGISGLCAAYYLEKeipeLPVELTLVEASDRVGGKIQTVKEDGYLIERGPDSFLERKKSAPDLvKDLGLeHVLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   79 GIPTTKAHGIWK-GDIFTIPTDFRSILSTPLLSWSAKVQFSRLMIRLGNLDVGEvpkmSLTAWAENEIKDPMVRNIFYAL 157
Cdd:TIGR00562  84 SDATGQRYVLVNrGKLMPVPTKIAPFVKTGLFSLGGKLRAGMDFIRPASPGKDE----SVEEFVRRRFGDEVVENLIEPL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  158 CRtTTYTFAPTIQLASSVLKQI-QLSMKEGVLyVDGGWETII----TKLRDIANNVG--VQFLAKK---HVLEIEHYEDK 227
Cdd:TIGR00562 160 LS-GIYAGDPSKLSLKSTFPKFyQTEQKHGSL-ILGMKKTRNlpqgSGLQLTAKKQGqdFQTLATGletLPEEIEKRLKL 237

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446635637  228 QRIHCFDD------------------EVFEVGTVIVTTPPKEACKIIKGAEGTSLHRWSEQSVPvTVAALDIGL 283
Cdd:TIGR00562 238 TKVYKGTKvtklshrgsnytleldngVTVETDSVVVTAPHKAAAGLLSELSNSASSHLDKIHSP-PVANVNLGF 310
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 5-40 3.57e-09

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 58.45  E-value: 3.57e-09
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 446635637    5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
4-41 4.46e-09

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 57.44  E-value: 4.46e-09
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 446635637   4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSrRFGGR 41
Cdd:COG0492    1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEGG-EPGGQ 37
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
2-36 1.35e-08

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 56.45  E-value: 1.35e-08
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446635637   2 KKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSR 36
Cdd:COG0665    1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERGR 35
PLN02612 PLN02612
phytoene desaturase
 2-428 1.92e-08

phytoene desaturase


Pssm-ID: 215330 [Multi-domain]  Cd Length: 567  Bit Score: 56.39  E-value: 1.92e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   2 KKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGR-GMTINKNGICMNLGAHALYrgGA---AFLTFNELGMN-- 75
Cdd:PLN02612  92 KPLKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKvAAWKDEDGDWYETGLHIFF--GAypnVQNLFGELGINdr 169

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637  76 LpggipTTKAHGIwkgdIFTIPT--------DFRSILSTPL------------LSWSAKVQFSRLM---IRLGNLDVGEV 132
Cdd:PLN02612 170 L-----QWKEHSM----IFAMPNkpgefsrfDFPEVLPAPLngiwailrnnemLTWPEKIKFAIGLlpaIVGGQAYVEAQ 240

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 133 PKMSLTAWAENE-IKDPMVRNIFYALCRTTTYtFAP---TIQLASSVLKQ-IQLSMKEGVLYVDGG-WETIITKLRDIAN 206
Cdd:PLN02612 241 DGLSVKEWMRKQgVPDRVNDEVFIAMSKALNF-INPdelSMQCILIALNRfLQEKHGSKMAFLDGNpPERLCMPIVDHFQ 319

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 207 NVGVQFLAKKHVLEIEHYEDKQRIHCF--DDEVFEvGTVIVTTPPKEACKIIKGAEGTSLHRWSEQSVPVTVAALDIGL- 283
Cdd:PLN02612 320 SLGGEVRLNSRIKKIELNDDGTVKHFLltNGSVVE-GDVYVSATPVDILKLLLPDQWKEIPYFKKLDKLVGVPVINVHIw 398

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 284 --RRLPNPthqfvigLDQPIFftnqSRAAKLSEDGSIAVSLIKYHNTVLEMNHI----------HEDKEQLESTMELLHP 351
Cdd:PLN02612 399 fdRKLKNT-------YDHLLF----SRSPLLSVYADMSTTCKEYYDPNKSMLELvfapaeewisRSDEDIIDATMKELAK 467

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637 352 NWKREVVAQQYLPKItVAYdfsHIerVETPGP---NIPE-----------MPGVYVAGDWTGQDELLA-DAAVASGKRAA 416
Cdd:PLN02612 468 LFPDEISADQSKAKI-LKY---HV--VKTPRSvykTVPNcepcrplqrspIEGFYLAGDYTKQKYLASmEGAVLSGKLCA 541

                        490
                 ....*....|..
gi 446635637 417 LHILKQLESEGV 428
Cdd:PLN02612 542 QSIVQDYELLAA 553
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
5-47 2.42e-08

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 56.02  E-value: 2.42e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINK 47
Cdd:COG1148  142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRAAQLHK 184
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 5-40 1.24e-07

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 53.17  E-value: 1.24e-07
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 446635637    5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS 36
HI0933_like pfam03486
HI0933-like protein;
4-67 1.37e-07

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 53.35  E-value: 1.37e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446635637    4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFgGRGMTINKNGIC----MNLGAHAL---YRGGAAFL 67
Cdd:pfam03486   1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKL-GRKILISGGGRCnvtnLSEEPDNFlsrYPGNPKFL 70
GlpB COG3075
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
3-32 1.43e-07

Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];


Pssm-ID: 442309  Cd Length: 415  Bit Score: 53.26  E-value: 1.43e-07
                         10        20        30
                 ....*....|....*....|....*....|
gi 446635637   3 KFDVAIVGGGLAGLTASIYLAKAGKKVIVL 32
Cdd:COG3075    2 KFDVVVIGGGLAGLTAAIRAAEAGLRVAIV 31
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 1-40 1.74e-07

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 53.17  E-value: 1.74e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKsRRFGG 40
Cdd:COG1249    1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEK-GRLGG 39
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
2-32 2.06e-07

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 52.93  E-value: 2.06e-07
                         10        20        30
                 ....*....|....*....|....*....|.
gi 446635637   2 KKFDVAIVGGGLAGLTASIYLAKAGKKVIVL 32
Cdd:PRK05329   1 MKFDVLVIGGGLAGLTAALAAAEAGKRVALV 31
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
1-40 4.20e-07

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 52.10  E-value: 4.20e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 446635637   1 MKKF--DVAIVGGGLAGLTASIYLAKAGKKVIVL--EKSRRFGG 40
Cdd:COG3573    1 MAAMdaDVIVVGAGLAGLVAAAELADAGRRVLLLdqEPEANLGG 44
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 1-34 5.58e-07

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 51.72  E-value: 5.58e-07
                         10        20        30
                 ....*....|....*....|....*....|....
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEK 34
Cdd:PRK06292   1 MEKYDVIVIGAGPAGYVAARRAAKLGKKVALIEK 34
PLN02576 PLN02576
protoporphyrinogen oxidase
 5-116 1.01e-06

protoporphyrinogen oxidase


Pssm-ID: 215314 [Multi-domain]  Cd Length: 496  Bit Score: 50.78  E-value: 1.01e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   5 DVAIVGGGLAGLTASIYLAKA-GKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALYRGGAAFLTFNELGM--NLPGGIP 81
Cdd:PLN02576  14 DVAVVGAGVSGLAAAYALASKhGVNVLVTEARDRVGGNITSVSEDGFIWEEGPNSFQPSDPELTSAVDSGLrdDLVFPDP 93

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 446635637  82 TTKAHGIWKGDIFTIPTDFRSILSTPLLSWSAKVQ 116
Cdd:PLN02576  94 QAPRYVVWNGKLRPLPSNPIDLPTFDLLSAPGKIR 128
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 2-40 1.30e-06

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 50.52  E-value: 1.30e-06
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 446635637   2 KKfdVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:COG0493  122 KK--VAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGG 158
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 5-40 1.40e-06

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 50.30  E-value: 1.40e-06
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 446635637    5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGG 36
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 5-46 1.60e-06

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 49.63  E-value: 1.60e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 446635637    5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRF--GGRGMTIN 46
Cdd:pfam01494   3 DVLIVGGGPAGLMLALLLARAGVRVVLVERHATTsvLPRAHGLN 46
PRK06185 PRK06185
FAD-dependent oxidoreductase;
1-38 1.65e-06

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 49.86  E-value: 1.65e-06
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRF 38
Cdd:PRK06185   4 VETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHADF 41
glycerol3P_GlpB TIGR03378
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are ...
 4-32 5.46e-06

glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic]


Pssm-ID: 213807  Cd Length: 419  Bit Score: 48.48  E-value: 5.46e-06
                          10        20
                  ....*....|....*....|....*....
gi 446635637    4 FDVAIVGGGLAGLTASIYLAKAGKKVIVL 32
Cdd:TIGR03378   1 FDVIIIGGGLAGLSCALRLAEAGKKCAII 29
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 6-40 5.89e-06

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 48.24  E-value: 5.89e-06
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK12810 146 VAVVGSGPAGLAAADQLARAGHKVTVFERADRIGG 180
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
 5-33 7.26e-06

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 48.36  E-value: 7.26e-06
                         10        20
                 ....*....|....*....|....*....
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGKKVIVLE 33
Cdd:PRK12834   6 DVIVVGAGLAGLVAAAELADAGKRVLLLD 34
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 1-40 8.81e-06

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 47.79  E-value: 8.81e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGkKVIVLEKSRRFGG 40
Cdd:COG0029    2 RLKTDVLVIGSGIAGLSAALKLAERG-RVTLLTKGELGES 40
PRK12416 PRK12416
protoporphyrinogen oxidase; Provisional
 6-115 9.26e-06

protoporphyrinogen oxidase; Provisional


Pssm-ID: 183516  Cd Length: 463  Bit Score: 47.90  E-value: 9.26e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGK------KVIVLEKSRRFGGRGMTINKNGICMNLGAHA--------------LYRGGAa 65
Cdd:PRK12416   4 VVVIGGGITGLSTMFYLEKLKKdynidlNLILVEKEEYLGGKIHSVEEKDFIMESGADSivarnehvmplvkdLNLEEE- 82

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446635637  66 fLTFNELGMNLpggIPTTKA-HGIWKGDIFTIPTDFRSILSTPLLSWSAKV 115
Cdd:PRK12416  83 -MVYNETGISY---IYSDNTlHPIPSDTIFGIPMSVESLFSSTLVSTKGKI 129
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
7-39 1.22e-05

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 47.35  E-value: 1.22e-05
                         10        20        30
                 ....*....|....*....|....*....|...
gi 446635637   7 AIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFG 39
Cdd:COG2081    1 IVIGAGAAGLMAAITAAERGARVLLLEKNPKVG 33
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 6-50 1.23e-05

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 47.48  E-value: 1.23e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGrgmtINKNGI 50
Cdd:PRK11749 143 VAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGG----LLRYGI 183
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 5-40 1.37e-05

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 46.31  E-value: 1.37e-05
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 446635637    5 DVAIVGGGLAGLTASIYLAKA-GKKVIVLEKSRRFGG 40
Cdd:pfam01946  19 DVVIVGAGSSGLTAAYYLAKNrGLKVAIIERSVSPGG 55
PTZ00306 PTZ00306
NADH-dependent fumarate reductase; Provisional
 6-40 1.82e-05

NADH-dependent fumarate reductase; Provisional


Pssm-ID: 140327 [Multi-domain]  Cd Length: 1167  Bit Score: 47.08  E-value: 1.82e-05
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 446635637    6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PTZ00306  412 VIVVGGGLAGCSAAIEAASCGAQVILLEKEAKLGG 446
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
1-40 2.25e-05

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 46.69  E-value: 2.25e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK05249   3 MYDYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERYRNVGG 42
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 4-47 2.36e-05

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 45.77  E-value: 2.36e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 446635637    4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINK 47
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTCPYGGCVLSK 44
PRK06134 PRK06134
putative FAD-binding dehydrogenase; Reviewed
 5-40 2.47e-05

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 180419 [Multi-domain]  Cd Length: 581  Bit Score: 46.64  E-value: 2.47e-05
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK06134  14 DVLVIGSGAAGLSAAVTAAWHGLKVIVVEKDPVFGG 49
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
4-40 2.68e-05

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 46.57  E-value: 2.68e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 446635637   4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK07843   8 YDVVVVGSGAAGMVAALTAAHRGLSTVVVEKAPHYGG 44
PLN02268 PLN02268
probable polyamine oxidase
 6-60 2.78e-05

probable polyamine oxidase


Pssm-ID: 177909 [Multi-domain]  Cd Length: 435  Bit Score: 46.22  E-value: 2.78e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNGICMNLGAHALY 60
Cdd:PLN02268   3 VIVIGGGIAGIAAARALHDASFKVTLLESRDRIGGRVHTDYSFGFPVDMGASWLH 57
PLN03000 PLN03000
amine oxidase
 3-59 3.20e-05

amine oxidase


Pssm-ID: 178578 [Multi-domain]  Cd Length: 881  Bit Score: 46.55  E-value: 3.20e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446635637   3 KFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGR----GMTINKNGICMNLGAHAL 59
Cdd:PLN03000 184 KSSVVIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRvytkKMEANRVGAAADLGGSVL 244
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 1-33 3.22e-05

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 45.92  E-value: 3.22e-05
                         10        20        30
                 ....*....|....*....|....*....|...
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLE 33
Cdd:PRK08849   1 MNKYDIAVVGGGMVGAATALGFAKQGRSVAVIE 33
PRK06370 PRK06370
FAD-containing oxidoreductase;
1-81 3.54e-05

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 45.96  E-value: 3.54e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKsRRFGGRgmtinkngiCMNLG-------------AHALYRGGaafl 67
Cdd:PRK06370   3 AQRYDAIVIGAGQAGPPLAARAAGLGMKVALIER-GLLGGT---------CVNTGcvptktliasaraAHLARRAA---- 68

                         90
                 ....*....|....
gi 446635637  68 tfnELGMNLPGGIP 81
Cdd:PRK06370  69 ---EYGVSVGGPVS 79
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
1-33 4.58e-05

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 45.33  E-value: 4.58e-05
                         10        20        30
                 ....*....|....*....|....*....|...
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLE 33
Cdd:PRK07608   3 HMKFDVVVVGGGLVGASLALALAQSGLRVALLA 35
PRK08274 PRK08274
FAD-dependent tricarballylate dehydrogenase TcuA;
1-43 4.64e-05

FAD-dependent tricarballylate dehydrogenase TcuA;


Pssm-ID: 236214 [Multi-domain]  Cd Length: 466  Bit Score: 45.64  E-value: 4.64e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRF--GG-----RGM 43
Cdd:PRK08274   2 ASMVDVLVIGGGNAALCAALAAREAGASVLLLEAAPREwrGGnsrhtRNL 51
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
1-32 5.18e-05

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 45.28  E-value: 5.18e-05
                         10        20        30
                 ....*....|....*....|....*....|..
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVL 32
Cdd:PRK07494   5 KEHTDIAVIGGGPAGLAAAIALARAGASVALV 36
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
1-39 5.91e-05

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 45.14  E-value: 5.91e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKA-GKKVIVLEKSRRFG 39
Cdd:COG0579    2 MEMYDVVIIGAGIVGLALARELSRYeDLKVLVLEKEDDVA 41
PRK09126 PRK09126
FAD-dependent hydroxylase;
1-35 6.00e-05

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 44.93  E-value: 6.00e-05
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKS 35
Cdd:PRK09126   1 MMHSDIVVVGAGPAGLSFARSLAGSGLKVTLIERQ 35
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 4-40 6.39e-05

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 44.62  E-value: 6.39e-05
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 446635637    4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEKsRRFGG 40
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEK-KSFPR 36
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
 5-40 7.62e-05

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 45.07  E-value: 7.62e-05
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK12842  11 DVLVIGSGAGGLSAAITARKLGLDVVVLEKEPVFGG 46
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
11-41 8.28e-05

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 44.19  E-value: 8.28e-05
                         10        20        30
                 ....*....|....*....|....*....|.
gi 446635637  11 GGLAGLTASIYLAKAGKKVIVLEKSRRFGGR 41
Cdd:COG0644    1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDK 31
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
4-34 8.29e-05

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 44.90  E-value: 8.29e-05
                         10        20        30
                 ....*....|....*....|....*....|.
gi 446635637   4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEK 34
Cdd:PRK06183  11 TDVVIVGAGPVGLTLANLLGQYGVRVLVLER 41
PLN02487 PLN02487
zeta-carotene desaturase
 3-60 9.47e-05

zeta-carotene desaturase


Pssm-ID: 215268 [Multi-domain]  Cd Length: 569  Bit Score: 44.79  E-value: 9.47e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446635637   3 KFDVAIVGGGLAGLTASIYLAKAGKKVIVLEkSRRF-GGR-GMTINKNGICMNLGAHALY 60
Cdd:PLN02487  75 KLKVAIIGAGLAGMSTAVELLDQGHEVDIYE-SRPFiGGKvGSFVDKNGNHIEMGLHVFF 133
PRK10015 PRK10015
oxidoreductase; Provisional
 3-44 1.30e-04

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 44.20  E-value: 1.30e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 446635637   3 KFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMT 44
Cdd:PRK10015   5 KFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMT 46
PRK06847 PRK06847
hypothetical protein; Provisional
 1-48 1.38e-04

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 43.71  E-value: 1.38e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 446635637   1 MKKfdVAIVGGGLAGLTASIYLAKAGKKVIVLEK--SRRFGGRGMTINKN 48
Cdd:PRK06847   4 VKK--VLIVGGGIGGLSAAIALRRAGIAVDLVEIdpEWRVYGAGITLQGN 51
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
 4-40 1.59e-04

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 43.99  E-value: 1.59e-04
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 446635637   4 FDVAIVGGGLAGLTASIYLAKAGKKV-IVLEksrRFGG 40
Cdd:PRK15317 212 YDVLVVGGGPAGAAAAIYAARKGIRTgIVAE---RFGG 246
PRK12843 PRK12843
FAD-dependent oxidoreductase;
4-40 1.63e-04

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 43.96  E-value: 1.63e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 446635637   4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK12843  17 FDVIVIGAGAAGMSAALFAAIAGLKVLLVERTEYVGG 53
PLN02676 PLN02676
polyamine oxidase
 1-56 2.35e-04

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 43.16  E-value: 2.35e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAG-KKVIVLEKSRRFGGRGMTINKNGICMNLGA 56
Cdd:PLN02676  24 KPSPSVIIVGAGMSGISAAKTLSEAGiEDILILEATDRIGGRMRKANFAGVSVELGA 80
PRK06753 PRK06753
hypothetical protein; Provisional
 6-62 2.46e-04

hypothetical protein; Provisional


Pssm-ID: 168661 [Multi-domain]  Cd Length: 373  Bit Score: 43.14  E-value: 2.46e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFG--GRGMTINKNGIcMNLGAHALYRG 62
Cdd:PRK06753   3 IAIIGAGIGGLTAAALLQEQGHEVKVFEKNESVKevGAGIGIGDNVI-KKLGNHDLAKG 60
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 4-61 3.16e-04

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 42.98  E-value: 3.16e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446635637   4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKngicmnLGAHALYR 61
Cdd:PRK10157   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGR------LYAHSLEH 57
PTZ00367 PTZ00367
squalene epoxidase; Provisional
 2-35 3.28e-04

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 42.92  E-value: 3.28e-04
                         10        20        30
                 ....*....|....*....|....*....|....
gi 446635637   2 KKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKS 35
Cdd:PTZ00367  32 YDYDVIIVGGSIAGPVLAKALSKQGRKVLMLERD 65
Ppro0129 COG2907
Predicted flavin-containing amine oxidase [General function prediction only];
1-40 3.45e-04

Predicted flavin-containing amine oxidase [General function prediction only];


Pssm-ID: 442151 [Multi-domain]  Cd Length: 423  Bit Score: 42.80  E-value: 3.45e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAgKKVIVLEKSRRFGG 40
Cdd:COG2907    1 MARMRIAVIGSGISGLTAAWLLSRR-HDVTLFEANDRLGG 39
PLN02328 PLN02328
lysine-specific histone demethylase 1 homolog
 1-49 3.57e-04

lysine-specific histone demethylase 1 homolog


Pssm-ID: 215187 [Multi-domain]  Cd Length: 808  Bit Score: 43.06  E-value: 3.57e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMTINKNG 49
Cdd:PLN02328 236 VEPANVVVVGAGLAGLVAARQLLSMGFKVVVLEGRARPGGRVKTMKMKG 284
PRK07121 PRK07121
FAD-binding protein;
5-55 3.91e-04

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 42.57  E-value: 3.91e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEksrRFGGRGMTINKNGICMNLG 55
Cdd:PRK07121  22 DVVVVGFGAAGACAAIEAAAAGARVLVLE---RAAGAGGATALSGGVIYLG 69
PRK12839 PRK12839
FAD-dependent oxidoreductase;
4-40 4.26e-04

FAD-dependent oxidoreductase;


Pssm-ID: 237223 [Multi-domain]  Cd Length: 572  Bit Score: 42.51  E-value: 4.26e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 446635637   4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK12839   9 YDVVVVGSGAGGLSAAVAAAYGGAKVLVVEKASTCGG 45
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 6-40 6.72e-04

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 41.78  E-value: 6.72e-04
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGG 174
PLN02976 PLN02976
amine oxidase
 6-44 6.88e-04

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 42.16  E-value: 6.88e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 446635637    6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMT 44
Cdd:PLN02976  696 IIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGGRVYT 734
PRK08163 PRK08163
3-hydroxybenzoate 6-monooxygenase;
6-75 7.81e-04

3-hydroxybenzoate 6-monooxygenase;


Pssm-ID: 181262 [Multi-domain]  Cd Length: 396  Bit Score: 41.56  E-value: 7.81e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFG--GRGMTINKNGICM--NLGAHALYRGGAAFLtfNELGMN 75
Cdd:PRK08163   7 VLIVGGGIGGLAAALALARQGIKVKLLEQAAEIGeiGAGIQLGPNAFSAldALGVGEAARQRAVFT--DHLTMM 78
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 4-40 8.23e-04

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 41.66  E-value: 8.23e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 446635637   4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK12844   7 YDVVVVGSGGGGMCAALAAADSGLEPLIVEKQDKVGG 43
mnmC PRK01747
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ...
 5-34 1.00e-03

bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;


Pssm-ID: 234978 [Multi-domain]  Cd Length: 662  Bit Score: 41.37  E-value: 1.00e-03
                         10        20        30
                 ....*....|....*....|....*....|
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEK 34
Cdd:PRK01747 262 DAAIIGGGIAGAALALALARRGWQVTLYEA 291
PLN02529 PLN02529
lysine-specific histone demethylase 1
 6-44 1.06e-03

lysine-specific histone demethylase 1


Pssm-ID: 178144 [Multi-domain]  Cd Length: 738  Bit Score: 41.42  E-value: 1.06e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGRGMT 44
Cdd:PLN02529 163 VIIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGGRVYT 201
PRK13984 PRK13984
putative oxidoreductase; Provisional
 6-40 1.61e-03

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 40.91  E-value: 1.61e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK13984 286 VAIVGSGPAGLSAAYFLATMGYEVTVYESLSKPGG 320
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
5-43 1.75e-03

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 40.71  E-value: 1.75e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGK---KVIVLEKSRRFgGRGM 43
Cdd:COG4529    7 RIAIIGGGASGTALAIHLLRRAPeplRITLFEPRPEL-GRGV 47
PRK12835 PRK12835
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 5-40 1.84e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 237221 [Multi-domain]  Cd Length: 584  Bit Score: 40.56  E-value: 1.84e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK12835  13 DVLVVGSGGGGMTAALTAAARGLDTLVVEKSAHFGG 48
PRK07804 PRK07804
L-aspartate oxidase; Provisional
 5-36 1.98e-03

L-aspartate oxidase; Provisional


Pssm-ID: 236102 [Multi-domain]  Cd Length: 541  Bit Score: 40.34  E-value: 1.98e-03
                         10        20        30
                 ....*....|....*....|....*....|..
gi 446635637   5 DVAIVGGGLAGLTASIYLAKAGKKVIVLEKSR 36
Cdd:PRK07804  18 DVVVVGSGVAGLTAALAARRAGRRVLVVTKAA 49
sdhA PRK08641
succinate dehydrogenase flavoprotein subunit; Reviewed
 1-29 2.02e-03

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 236319 [Multi-domain]  Cd Length: 589  Bit Score: 40.34  E-value: 2.02e-03
                         10        20
                 ....*....|....*....|....*....
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKV 29
Cdd:PRK08641   1 MAKGKVIVVGGGLAGLMATIKAAEAGVHV 29
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 6-40 2.13e-03

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 40.48  E-value: 2.13e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGG 230
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
 2-35 3.07e-03

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 39.58  E-value: 3.07e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 446635637   2 KKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKS 35
Cdd:PRK08020   4 QPTDIAIVGGGMVGAALALGLAQHGFSVAVLEHA 37
GIDA pfam01134
Glucose inhibited division protein A;
5-32 3.69e-03

Glucose inhibited division protein A;


Pssm-ID: 250388 [Multi-domain]  Cd Length: 391  Bit Score: 39.46  E-value: 3.69e-03
                          10        20
                  ....*....|....*....|....*...
gi 446635637    5 DVAIVGGGLAGLTASIYLAKAGKKVIVL 32
Cdd:pfam01134   1 DVIVIGGGHAGCEAALAAARMGAKVLLI 28
PRK09077 PRK09077
L-aspartate oxidase; Provisional
 1-34 4.04e-03

L-aspartate oxidase; Provisional


Pssm-ID: 236374 [Multi-domain]  Cd Length: 536  Bit Score: 39.51  E-value: 4.04e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAgKKVIVLEK 34
Cdd:PRK09077   6 EHQCDVLIIGSGAAGLSLALRLAEH-RRVAVLSK 38
PRK06481 PRK06481
flavocytochrome c;
3-40 4.20e-03

flavocytochrome c;


Pssm-ID: 180584 [Multi-domain]  Cd Length: 506  Bit Score: 39.43  E-value: 4.20e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 446635637   3 KFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK06481  61 KYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGG 98
PRK08013 PRK08013
oxidoreductase; Provisional
 1-34 4.23e-03

oxidoreductase; Provisional


Pssm-ID: 236139 [Multi-domain]  Cd Length: 400  Bit Score: 39.26  E-value: 4.23e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEK 34
Cdd:PRK08013   1 MQSVDVVIAGGGMVGLAVACGLQGSGLRVAVLEQ 34
PRK07251 PRK07251
FAD-containing oxidoreductase;
1-55 4.62e-03

FAD-containing oxidoreductase;


Pssm-ID: 180907 [Multi-domain]  Cd Length: 438  Bit Score: 38.96  E-value: 4.62e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGrgmtinknGICMNLG 55
Cdd:PRK07251   1 MLTYDLIVIGFGKAGKTLAAKLASAGKKVALVEESKAMYG--------GTCINIG 47
PRK12831 PRK12831
putative oxidoreductase; Provisional
 6-40 4.79e-03

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 39.23  E-value: 4.79e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGG 40
Cdd:PRK12831 143 VAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGG 177
PRK08401 PRK08401
L-aspartate oxidase; Provisional
 6-32 5.54e-03

L-aspartate oxidase; Provisional


Pssm-ID: 236259 [Multi-domain]  Cd Length: 466  Bit Score: 39.01  E-value: 5.54e-03
                         10        20
                 ....*....|....*....|....*..
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVL 32
Cdd:PRK08401   4 VGIVGGGLAGLTAAISLAKKGFDVTII 30
PRK08010 PRK08010
pyridine nucleotide-disulfide oxidoreductase; Provisional
 1-55 5.91e-03

pyridine nucleotide-disulfide oxidoreductase; Provisional


Pssm-ID: 181196 [Multi-domain]  Cd Length: 441  Bit Score: 38.84  E-value: 5.91e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446635637   1 MKKFDVAIVGGGLAGLTASIYLAKAGKKVIVLEKSRRFGGrgmtinknGICMNLG 55
Cdd:PRK08010   1 MNKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYG--------GTCINIG 47
COG4716 COG4716
Myosin-crossreactive antigen (function unknown) [Function unknown];
8-40 6.16e-03

Myosin-crossreactive antigen (function unknown) [Function unknown];


Pssm-ID: 443751  Cd Length: 578  Bit Score: 39.04  E-value: 6.16e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 446635637   8 IVGGGLAGLTASIYLAK----AGKKVIVLEKSRRFGG 40
Cdd:COG4716   27 LVGSGLASLAAAAFLIRdgqmPGENIHILEELDLPGG 63
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 6-52 7.33e-03

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 38.70  E-value: 7.33e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 446635637   6 VAIVGGGLAGLTASIYLAKAGKKVIVLEK--SRRFGGRgmtinknGICM 52
Cdd:PRK08132  26 VVVVGAGPVGLALAIDLAQQGVPVVLLDDddTLSTGSR-------AICF 67
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 6-37 7.76e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 38.07  E-value: 7.76e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 446635637    6 VAIVGGGLAGLTASIYLAKAGKKVIVLEKSRR 37
Cdd:pfam07992 155 VVVVGGGYIGVELAAALAKLGKEVTLIEALDR 186
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
 4-34 8.56e-03

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 38.27  E-value: 8.56e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 446635637    4 FDVAIVGGGLAGLTASIYLAKAGKKVIVLEK 34
Cdd:TIGR01377   1 FDVIVVGAGIMGCFAAYHLAKHGKKTLLLEQ 31
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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