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Conserved domains on  [gi|446658436|ref|WP_000735782|]
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MULTISPECIES: aspartate dehydrogenase [Acinetobacter]

Protein Classification

aspartate dehydrogenase( domain architecture ID 11486547)

aspartate dehydrogenase specifically catalyzes the NAD(P)-dependent dehydrogenation of L-aspartate to iminoaspartate, which decomposes to oxaloacetate and ammonia in solution, in the first step of NAD biosynthesis from aspartate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK13303 PRK13303
aspartate dehydrogenase;
1-263 1.91e-143

aspartate dehydrogenase;


:

Pssm-ID: 237342 [Multi-domain]  Cd Length: 265  Bit Score: 402.78  E-value: 1.91e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436   1 MKKLMMIGFGAMAAEVYAHLPQD--LQLKWIVVPSRSIEKVQSQVSSEIQVISDIEQCDGTPDYVIEVAGQAAVKEHAQK 78
Cdd:PRK13303   1 MMKVAMIGFGAIGAAVLELLEHDpdLRVDWVIVPEHSIDAVRRALGEAVRVVSSVDALPQRPDLVVECAGHAALKEHVVP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  79 VLAKGWTIGLISVGTLADSEFLVQLKQTAEKNDAHLHLLAGAIAGIDGISAAKEGGLQKVTYKGCKSPKSWKGSYAEQLV 158
Cdd:PRK13303  81 ILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAIGGIDALAAAKEGGLDEVTYTGRKPPKSWRGTPAEQLC 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436 159 DLDHVSEPTVFFTGTAREAAMKFPANANVAATIALAGLGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLPS 238
Cdd:PRK13303 161 DLDALTEPTVIFEGSAREAARLFPKNANVAATVALAGLGLDRTRVELIADPAVTRNVHEIEARGAFGEFEFEMSGKPLPD 240
                        250       260
                 ....*....|....*....|....*
gi 446658436 239 NPKTSTLAALSVIRACRNSVEAIQI 263
Cdd:PRK13303 241 NPKTSALTALSAIRALRNRAAAIVI 265
 
Name Accession Description Interval E-value
PRK13303 PRK13303
aspartate dehydrogenase;
1-263 1.91e-143

aspartate dehydrogenase;


Pssm-ID: 237342 [Multi-domain]  Cd Length: 265  Bit Score: 402.78  E-value: 1.91e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436   1 MKKLMMIGFGAMAAEVYAHLPQD--LQLKWIVVPSRSIEKVQSQVSSEIQVISDIEQCDGTPDYVIEVAGQAAVKEHAQK 78
Cdd:PRK13303   1 MMKVAMIGFGAIGAAVLELLEHDpdLRVDWVIVPEHSIDAVRRALGEAVRVVSSVDALPQRPDLVVECAGHAALKEHVVP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  79 VLAKGWTIGLISVGTLADSEFLVQLKQTAEKNDAHLHLLAGAIAGIDGISAAKEGGLQKVTYKGCKSPKSWKGSYAEQLV 158
Cdd:PRK13303  81 ILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAIGGIDALAAAKEGGLDEVTYTGRKPPKSWRGTPAEQLC 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436 159 DLDHVSEPTVFFTGTAREAAMKFPANANVAATIALAGLGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLPS 238
Cdd:PRK13303 161 DLDALTEPTVIFEGSAREAARLFPKNANVAATVALAGLGLDRTRVELIADPAVTRNVHEIEARGAFGEFEFEMSGKPLPD 240
                        250       260
                 ....*....|....*....|....*
gi 446658436 239 NPKTSTLAALSVIRACRNSVEAIQI 263
Cdd:PRK13303 241 NPKTSALTALSAIRALRNRAAAIVI 265
AspD COG1712
L-aspartate dehydrogenase, NAD(P)-dependent [Amino acid transport and metabolism];
2-263 1.11e-123

L-aspartate dehydrogenase, NAD(P)-dependent [Amino acid transport and metabolism];


Pssm-ID: 441318 [Multi-domain]  Cd Length: 263  Bit Score: 352.57  E-value: 1.11e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436   2 KKLMMIGFGAMAAEVYAHL-PQDLQLKWIVVPSRSIEKVQSQvSSEIQVISDIEQ-CDGTPDYVIEVAGQAAVKEHAQKV 79
Cdd:COG1712    1 MRIGLIGCGAIGSEVAEALaDAGVELVAVYDRDPERAEALLA-SLGARVVSDVDElLAADPDLVVEAASQAAVREHGPAV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  80 LAKGWTIGLISVGTLADSEFLVQLKQTAEKNDAHLHLLAGAIAGIDGISAAKEGGLQKVTYKGCKSPKSWKGSYAEQLVD 159
Cdd:COG1712   80 LEAGKDLMIMSVGALADEELLERLEAAAREGGARIYLPSGAIGGLDALKAARIGGLDSVTLTTRKPPKSWKGTPAEKLID 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436 160 LDHVSEPTVFFTGTAREAAMKFPANANVAATIALAGLGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLPSN 239
Cdd:COG1712  160 LDALTEPTVIFEGSAREAARLFPKNANVAATLALAGIGFDRTRVRLVADPAATRNIHEIEAEGDFGEFEIRVENVPSPDN 239
                        250       260
                 ....*....|....*....|....
gi 446658436 240 PKTSTLAALSVIRACRNSVEAIQI 263
Cdd:COG1712  240 PKTSYLAALSAVRALRNLVAPIVI 263
Asp_DH_C pfam01958
Aspartate dehydrogenase, C-terminal; This entry represents the C-terminal domain of aspartate ...
165-251 8.18e-41

Aspartate dehydrogenase, C-terminal; This entry represents the C-terminal domain of aspartate dehydrogenases that belong to a unique class of amino acid dehydrogenases. The structure of Thermotoga maritima TM1643 has been found to contain an N-terminal Rossmann fold domain (which binds the NAD(P)+ cofactor) and a C-terminal alpha/beta domain. Enzymatic characterization of TM1643 revealed that it possesses NAD or NADP-dependent dehydrogenase activity toward L-aspartate but no aspartate oxidase activity. Members of this group share some structural similarity to several other NAD(P)+-dependent oxidoreductases, including inositol 1-phosphate synthase, dihydrodipicolinate reductase, and ASA-DH. It has been proposed that in Thermotoga maritima, TM1643 catalyzes the first reaction of de novo biosynthesis of NAD from aspartate, and it produces iminoaspartate required for this pathway.


Pssm-ID: 426531 [Multi-domain]  Cd Length: 87  Bit Score: 135.70  E-value: 8.18e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  165 EPTVFFTGTAREAAMKFPANANVAATIALAGLGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLPSNPKTST 244
Cdd:pfam01958   1 EPTVLFEGPAREAVKLFPKNVNVAAALALAGIGFDRTRVRLVADPAADRNIHEIEVEGDFGEFRFRVENVPSPDNPKTSA 80

                  ....*..
gi 446658436  245 LAALSVI 251
Cdd:pfam01958  81 LAALSAI 87
 
Name Accession Description Interval E-value
PRK13303 PRK13303
aspartate dehydrogenase;
1-263 1.91e-143

aspartate dehydrogenase;


Pssm-ID: 237342 [Multi-domain]  Cd Length: 265  Bit Score: 402.78  E-value: 1.91e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436   1 MKKLMMIGFGAMAAEVYAHLPQD--LQLKWIVVPSRSIEKVQSQVSSEIQVISDIEQCDGTPDYVIEVAGQAAVKEHAQK 78
Cdd:PRK13303   1 MMKVAMIGFGAIGAAVLELLEHDpdLRVDWVIVPEHSIDAVRRALGEAVRVVSSVDALPQRPDLVVECAGHAALKEHVVP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  79 VLAKGWTIGLISVGTLADSEFLVQLKQTAEKNDAHLHLLAGAIAGIDGISAAKEGGLQKVTYKGCKSPKSWKGSYAEQLV 158
Cdd:PRK13303  81 ILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAIGGIDALAAAKEGGLDEVTYTGRKPPKSWRGTPAEQLC 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436 159 DLDHVSEPTVFFTGTAREAAMKFPANANVAATIALAGLGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLPS 238
Cdd:PRK13303 161 DLDALTEPTVIFEGSAREAARLFPKNANVAATVALAGLGLDRTRVELIADPAVTRNVHEIEARGAFGEFEFEMSGKPLPD 240
                        250       260
                 ....*....|....*....|....*
gi 446658436 239 NPKTSTLAALSVIRACRNSVEAIQI 263
Cdd:PRK13303 241 NPKTSALTALSAIRALRNRAAAIVI 265
AspD COG1712
L-aspartate dehydrogenase, NAD(P)-dependent [Amino acid transport and metabolism];
2-263 1.11e-123

L-aspartate dehydrogenase, NAD(P)-dependent [Amino acid transport and metabolism];


Pssm-ID: 441318 [Multi-domain]  Cd Length: 263  Bit Score: 352.57  E-value: 1.11e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436   2 KKLMMIGFGAMAAEVYAHL-PQDLQLKWIVVPSRSIEKVQSQvSSEIQVISDIEQ-CDGTPDYVIEVAGQAAVKEHAQKV 79
Cdd:COG1712    1 MRIGLIGCGAIGSEVAEALaDAGVELVAVYDRDPERAEALLA-SLGARVVSDVDElLAADPDLVVEAASQAAVREHGPAV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  80 LAKGWTIGLISVGTLADSEFLVQLKQTAEKNDAHLHLLAGAIAGIDGISAAKEGGLQKVTYKGCKSPKSWKGSYAEQLVD 159
Cdd:COG1712   80 LEAGKDLMIMSVGALADEELLERLEAAAREGGARIYLPSGAIGGLDALKAARIGGLDSVTLTTRKPPKSWKGTPAEKLID 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436 160 LDHVSEPTVFFTGTAREAAMKFPANANVAATIALAGLGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLPSN 239
Cdd:COG1712  160 LDALTEPTVIFEGSAREAARLFPKNANVAATLALAGIGFDRTRVRLVADPAATRNIHEIEAEGDFGEFEIRVENVPSPDN 239
                        250       260
                 ....*....|....*....|....
gi 446658436 240 PKTSTLAALSVIRACRNSVEAIQI 263
Cdd:COG1712  240 PKTSYLAALSAVRALRNLVAPIVI 263
PRK13304 PRK13304
aspartate dehydrogenase;
1-263 5.67e-61

aspartate dehydrogenase;


Pssm-ID: 237343 [Multi-domain]  Cd Length: 265  Bit Score: 193.28  E-value: 5.67e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436   1 MKKLMMIGFGAMAAEVY-AHLPQDLQLKWIVVPSRSIEKVQSqVSSEI--QVISDIEQCDGTPDYVIEVAGQAAVKEHAQ 77
Cdd:PRK13304   1 MLKIGIVGCGAIASLITkAILSGRINAELYAFYDRNLEKAEN-LASKTgaKACLSIDELVEDVDLVVECASVNAVEEVVP 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  78 KVLAKGWTIGLISVGTLADSEFLVQLKQTAEKNDAHLHLLAGAIAGIDGISAAKEGGLQKVTYKGCKSPKSWKGSYAEQL 157
Cdd:PRK13304  80 KSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKIYLPSGAIVGLDGIKAASLGEIKSVTLTTRKPPKGLEGALKELG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436 158 VDLDHVSEPTVFFTGTAREAAMKFPANANVAATIALAglGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLP 237
Cdd:PRK13304 160 IDLEEIKEPKVLFEGKAFEAVKKFPANINVAATLSLA--SIYPAKVKIIADPNLDRNVHEITVKGSFGTFKTRVENVPCP 237
                        250       260
                 ....*....|....*....|....*.
gi 446658436 238 SNPKTSTLAALSVIRACRNSVEAIQI 263
Cdd:PRK13304 238 DNPKTSALAAYSAIRLLKDLSEPIQV 263
PRK13301 PRK13301
putative L-aspartate dehydrogenase; Provisional
3-263 1.09e-45

putative L-aspartate dehydrogenase; Provisional


Pssm-ID: 106261 [Multi-domain]  Cd Length: 267  Bit Score: 154.11  E-value: 1.09e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436   3 KLMMIGFGAMAAEVYAHLPQDL-QLKWIVVPSRSIEKVQSQVSSEIQVISDIEQCDG-TPDYVIEVAGQAAVKEHAQKVL 80
Cdd:PRK13301   4 RIAFIGLGAIASDVAAGLLADAaQPCQLAALTRNAADLPPALAGRVALLDGLPGLLAwRPDLVVEAAGQQAIAEHAEGCL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  81 AKGWTIGLISVGTLADSEFLVQLKQTAEKNDAHLHLLAGAIAGIDGISAAKEGGLQKVTYKGCKSPKSWKGSYAEQLVDL 160
Cdd:PRK13301  84 TAGLDMIICSAGALADDALRARLIAAAEAGGARIRVPAGAIAGLDYLQAVAGRDDAEVVYESRKPVAAWRAELPGMGIDP 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436 161 DHVSEPTVFFTGTAREAAMKFPANANVAATIALAGLGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLPSNP 240
Cdd:PRK13301 164 DTLAESRTLFSGPAREAALRFPKNLNVAATLALAGIGMTRTRVEVVVDPRARGNQHRIQVRSPLGEMQIELVNAPSPANP 243
                        250       260
                 ....*....|....*....|...
gi 446658436 241 KTSTLAALSVIRACRNSVEAIQI 263
Cdd:PRK13301 244 KTSWLVAQSVLATIRRHLARFTI 266
PRK13302 PRK13302
aspartate dehydrogenase;
3-263 3.07e-42

aspartate dehydrogenase;


Pssm-ID: 237341 [Multi-domain]  Cd Length: 271  Bit Score: 145.38  E-value: 3.07e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436   3 KLMMIGFGAMAAEVYAHLPQDLQ-LKWIVVPSRSIEKVQSQVSSEIQ--VISDIEQCDGTPDYVIEVAGQAAVKEHAQKV 79
Cdd:PRK13302   8 RVAIAGLGAIGKAIAQALDRGLPgLTLSAVAVRDPQRHADFIWGLRRppPVVPLDQLATHADIVVEAAPASVLRAIVEPV 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  80 LAKGWTIGLISVGTLADSEFLVQLkqtAEKNDAHLHLLAGAIAGIDGISAAKEGGLQKVTYKGCKSPKSWKGS--YAEQL 157
Cdd:PRK13302  88 LAAGKKAIVLSVGALLRNEDLIDL---ARQNGGQIIVPTGALLGLDAVTAAAEGTIHSVKMITRKPPDGLKGApfLVTNN 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436 158 VDLDHVSEPTVFFTGTAREAAMKFPANANVAATIALAGLGMDETMVELTVDPTINKNKHTI--VAEGGFGQMTIELVgvp 235
Cdd:PRK13302 165 IDIDGLTEPLLLFEGSAREAAKGFPANLNVAVALSLAGIGPDRTTLEIWADPGVTRNVHRIevDADSARFSMTIENI--- 241
                        250       260
                 ....*....|....*....|....*....
gi 446658436 236 lPS-NPKTSTLAALSVIRACRNSVEAIQI 263
Cdd:PRK13302 242 -PSeNPKTGRITAQSVIALLRKQSAPLRV 269
Asp_DH_C pfam01958
Aspartate dehydrogenase, C-terminal; This entry represents the C-terminal domain of aspartate ...
165-251 8.18e-41

Aspartate dehydrogenase, C-terminal; This entry represents the C-terminal domain of aspartate dehydrogenases that belong to a unique class of amino acid dehydrogenases. The structure of Thermotoga maritima TM1643 has been found to contain an N-terminal Rossmann fold domain (which binds the NAD(P)+ cofactor) and a C-terminal alpha/beta domain. Enzymatic characterization of TM1643 revealed that it possesses NAD or NADP-dependent dehydrogenase activity toward L-aspartate but no aspartate oxidase activity. Members of this group share some structural similarity to several other NAD(P)+-dependent oxidoreductases, including inositol 1-phosphate synthase, dihydrodipicolinate reductase, and ASA-DH. It has been proposed that in Thermotoga maritima, TM1643 catalyzes the first reaction of de novo biosynthesis of NAD from aspartate, and it produces iminoaspartate required for this pathway.


Pssm-ID: 426531 [Multi-domain]  Cd Length: 87  Bit Score: 135.70  E-value: 8.18e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436  165 EPTVFFTGTAREAAMKFPANANVAATIALAGLGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLPSNPKTST 244
Cdd:pfam01958   1 EPTVLFEGPAREAVKLFPKNVNVAAALALAGIGFDRTRVRLVADPAADRNIHEIEVEGDFGEFRFRVENVPSPDNPKTSA 80

                  ....*..
gi 446658436  245 LAALSVI 251
Cdd:pfam01958  81 LAALSAI 87
NAD_binding_3 pfam03447
Homoserine dehydrogenase, NAD binding domain; This domain adopts a Rossmann NAD binding fold. ...
8-116 7.55e-08

Homoserine dehydrogenase, NAD binding domain; This domain adopts a Rossmann NAD binding fold. The C-terminal domain of homoserine dehydrogenase contributes a single helix to this structural domain, which is not included in the Pfam model.


Pssm-ID: 281446 [Multi-domain]  Cd Length: 116  Bit Score: 49.61  E-value: 7.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446658436    8 GFGAMAAEVYAHLPQD-----LQLKWIVVPSRSIEKVQSQVSSEIQViSDIEQ--CDGTPDYVIEVAGQAAVKEHAQKVL 80
Cdd:pfam03447   1 GCGAIGSGVLEQLLRQqseipLELVAVADRDLLSKDPLALLPDEPLT-LDLDDliAHPDPDVVVECASSEAVAELVLDAL 79
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 446658436   81 AKGWTIGLISVGTLADSEFLVQLKQTAEKNDAHLHL 116
Cdd:pfam03447  80 KAGKDVVTASKGALADLALYEELREAAEANGARIYV 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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