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Conserved domains on  [gi|446661208|ref|WP_000738554|]
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MULTISPECIES: BC1881 family protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
phage_BC1881 NF033495
BC1881 family protein; Members of this family of very small proteins (average length is about ...
 6-48 1.91e-16

BC1881 family protein; Members of this family of very small proteins (average length is about 50 residues) include BC1881 from the phBC6A51 prophage region of the Bacillus cereus ATCC 14579 genome.


:

Pssm-ID: 411137  Cd Length: 45  Bit Score: 64.20  E-value: 1.91e-16
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 446661208  6 TKELSNELRKREGIISITVEPYEKIEVGGIRVDGPAVILINQE 48
Cdd:NF033495  3 TKELSEELKKREGVETINVEPYEKIEVGGIKVEGPAIILINQD 45
 
Name Accession Description Interval E-value
phage_BC1881 NF033495
BC1881 family protein; Members of this family of very small proteins (average length is about ...
 6-48 1.91e-16

BC1881 family protein; Members of this family of very small proteins (average length is about 50 residues) include BC1881 from the phBC6A51 prophage region of the Bacillus cereus ATCC 14579 genome.


Pssm-ID: 411137  Cd Length: 45  Bit Score: 64.20  E-value: 1.91e-16
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 446661208  6 TKELSNELRKREGIISITVEPYEKIEVGGIRVDGPAVILINQE 48
Cdd:NF033495  3 TKELSEELKKREGVETINVEPYEKIEVGGIKVEGPAIILINQD 45
 
Name Accession Description Interval E-value
phage_BC1881 NF033495
BC1881 family protein; Members of this family of very small proteins (average length is about ...
 6-48 1.91e-16

BC1881 family protein; Members of this family of very small proteins (average length is about 50 residues) include BC1881 from the phBC6A51 prophage region of the Bacillus cereus ATCC 14579 genome.


Pssm-ID: 411137  Cd Length: 45  Bit Score: 64.20  E-value: 1.91e-16
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 446661208  6 TKELSNELRKREGIISITVEPYEKIEVGGIRVDGPAVILINQE 48
Cdd:NF033495  3 TKELSEELKKREGVETINVEPYEKIEVGGIKVEGPAIILINQD 45
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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