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Conserved domains on  [gi|446664761|ref|WP_000742107|]
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MULTISPECIES: thiamine-phosphate kinase [Enterobacteriaceae]

Protein Classification

thiamine-monophosphate kinase( domain architecture ID 11481573)

thiamine-monophosphate kinase catalyzes the formation of thiamine pyrophosphate (TPP) from thiamine monophosphate in an ATP- and Mg2+-dependent manner

EC:  2.7.4.16
Gene Ontology:  GO:0009228|GO:0009030
PubMed:  10382260

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK05731 PRK05731
thiamine monophosphate kinase; Provisional
1-322 5.66e-173

thiamine monophosphate kinase; Provisional


:

Pssm-ID: 235583 [Multi-domain]  Cd Length: 318  Bit Score: 482.02  E-value: 5.66e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   1 MACGEFSLIARYFDRVRSSRLdveLGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPD-IDPADLAYKALAVNLSDLAAM 79
Cdd:PRK05731   1 MAMGEFDLIARLFARRPSSRE---LGIGDDAALLGPPPGQRLVVSTDMLVEGVHFRPDwSSPEDLGYKALAVNLSDLAAM 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  80 GADPAWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGP-LSMTLGIHGFVPMGRALTRSGAKPGDWIYV 157
Cdd:PRK05731  78 GARPAAFLLALALPkDLDEAWLEALADGLFELADRYGAELIGGDTTRGPdLSISVTAIGDVPGGRALRRSGAKPGDLVAV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 158 TGTPGDSAAGLAILQNRLQVADAkDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGARIDLA 237
Cdd:PRK05731 158 TGTLGDSAAGLALLLNGLRVPDA-DAAALISRHLRPQPRVGLGQALAGLASAAIDISDGLAADLGHIAEASGVGADIDLD 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 238 LLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTAdieGLCFIRDGEPVTFDWK 317
Cdd:PRK05731 237 ALPISPALREAAEGEDALRWALSGGEDYELLFTFPPENRGALLAAAGHLGVGVTIIGRVTE---GEGVVVDGEPVTLDLK 313

                 ....*
gi 446664761 318 GYDHF 322
Cdd:PRK05731 314 GYDHF 318
 
Name Accession Description Interval E-value
PRK05731 PRK05731
thiamine monophosphate kinase; Provisional
1-322 5.66e-173

thiamine monophosphate kinase; Provisional


Pssm-ID: 235583 [Multi-domain]  Cd Length: 318  Bit Score: 482.02  E-value: 5.66e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   1 MACGEFSLIARYFDRVRSSRLdveLGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPD-IDPADLAYKALAVNLSDLAAM 79
Cdd:PRK05731   1 MAMGEFDLIARLFARRPSSRE---LGIGDDAALLGPPPGQRLVVSTDMLVEGVHFRPDwSSPEDLGYKALAVNLSDLAAM 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  80 GADPAWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGP-LSMTLGIHGFVPMGRALTRSGAKPGDWIYV 157
Cdd:PRK05731  78 GARPAAFLLALALPkDLDEAWLEALADGLFELADRYGAELIGGDTTRGPdLSISVTAIGDVPGGRALRRSGAKPGDLVAV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 158 TGTPGDSAAGLAILQNRLQVADAkDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGARIDLA 237
Cdd:PRK05731 158 TGTLGDSAAGLALLLNGLRVPDA-DAAALISRHLRPQPRVGLGQALAGLASAAIDISDGLAADLGHIAEASGVGADIDLD 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 238 LLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTAdieGLCFIRDGEPVTFDWK 317
Cdd:PRK05731 237 ALPISPALREAAEGEDALRWALSGGEDYELLFTFPPENRGALLAAAGHLGVGVTIIGRVTE---GEGVVVDGEPVTLDLK 313

                 ....*
gi 446664761 318 GYDHF 322
Cdd:PRK05731 314 GYDHF 318
ThiL COG0611
Thiamine monophosphate kinase [Coenzyme transport and metabolism]; Thiamine monophosphate ...
3-322 8.74e-153

Thiamine monophosphate kinase [Coenzyme transport and metabolism]; Thiamine monophosphate kinase is part of the Pathway/BioSystem: Thiamine biosynthesis


Pssm-ID: 440376 [Multi-domain]  Cd Length: 321  Bit Score: 431.11  E-value: 8.74e-153
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   3 CGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQtLAISTDTLVAGNHFLPD-IDPADLAYKALAVNLSDLAAMGA 81
Cdd:COG0611    1 MGEFGLIERLFKRLALRGPDVLLGIGDDAAVLDPPGGR-LVVTTDMLVEGVHFPLDwMSPEDLGWKAVAVNLSDLAAMGA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  82 DPAWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGP-LSMTLGIHGFVPMGRALTRSGAKPGDWIYVTG 159
Cdd:COG0611   80 RPLAALLSLALPpDTDVEWLEEFARGLAEAADRYGVDLVGGDTTRSPeLTISVTAIGEVPGGRPLLRSGARPGDLVYVTG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 160 TPGDSAAGLAILQNRLQVADAkDADYLIKRHLRPSPRILQGQALR--DLANSAIDLSDGLISDLGHIVKASDCGARIDLA 237
Cdd:COG0611  160 TLGDAAAGLALLLRGLRVPLE-AREYLLERHLRPEPRLALGRALAeaGLATAMIDISDGLAADLGHIAEASGVGAEIDLD 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 238 LLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALghLGVPFTCIGQMTADIEGLCFIRDGEPVTFDWK 317
Cdd:COG0611  239 ALPLSPALREAALGLDPLELALTGGEDYELLFTVPPEALEALEAAA--LGVPLTVIGRVTEGEGVTLDDADGRPIPLEAR 316

                 ....*
gi 446664761 318 GYDHF 322
Cdd:COG0611  317 GWDHF 321
thiL TIGR01379
thiamine-phosphate kinase; This model describes thiamine-monophosphate kinase, an enzyme that ...
4-322 4.09e-149

thiamine-phosphate kinase; This model describes thiamine-monophosphate kinase, an enzyme that converts thiamine monophosphate into thiamine pyrophosphate (TPP, coenzyme B1), an enzyme cofactor. Thiamine monophosphate may be derived from de novo synthesis or from unphosphorylated thiamine, known as vitamin B1. Proteins scoring between the trusted and noise cutoff for this model include short forms from the Thermoplasmas (which lack the N-terminal region) and a highly derived form from Campylobacter jejuni. Eukaryotes lack this enzyme, and add pyrophosphate from ATP to unphosphorylated thiamine in a single step. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]


Pssm-ID: 273589 [Multi-domain]  Cd Length: 317  Bit Score: 421.74  E-value: 4.09e-149
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761    4 GEFSLIARYFDRvRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADP 83
Cdd:TIGR01379   1 GEFELIDRILRR-LVQDPDVALGIGDDAALVSAPEGRDLVLTTDTLVEGVHFPPDTTPEDLGWKAVAVNLSDLAAMGATP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   84 AWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGP-LSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTP 161
Cdd:TIGR01379  80 KWFLLSLGLPsDLDEAWLEAFYDGLFEAAKQYGVPLVGGDTVSSPeLVVTVTAIGEAPKGRALLRSGAKPGDLVFVTGTL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  162 GDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGARIDLALLPF 241
Cdd:TIGR01379 160 GDSAAGLALLLKGKKEPDEEDDEALLQRHLRPEPRVEEGLALAGYANAAIDVSDGLAADLGHIAEASGVGIVIDLDRLPL 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  242 SDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHlgvPFTCIGQMTADIEGLCFIRDGEPVTFDWKGYDH 321
Cdd:TIGR01379 240 SSELAAWAEGKNPLEWALSGGEDYELVFTVPPERREALLDAAKG---PLTRIGRVTEGEGVVLLADGKTVELLDRLGWQH 316

                  .
gi 446664761  322 F 322
Cdd:TIGR01379 317 F 317
ThiL cd02194
ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage ...
4-297 5.00e-133

ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine. Thiamine salvage occurs in two steps, with thiamine kinase catalyzing the formation of thiamine phosphate, and ThiL catalyzing the conversion of this intermediate to thiamine pyrophosphate. The N-terminal domain of ThiL binds ATP and is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, FGAM synthase and selenophosphate synthetase (SelD).


Pssm-ID: 100030 [Multi-domain]  Cd Length: 291  Bit Score: 379.98  E-value: 5.00e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   4 GEFSLIARYFDRVRSSRlDVELGIGDDCALLNIPEKQtLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADP 83
Cdd:cd02194    1 GEFELIDRLFKRLGAGP-GVLLGIGDDAAVLKPPGGR-LVVTTDTLVEGVHFPPDTTPEDIGWKALAVNLSDLAAMGARP 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  84 AWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRG-PLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTP 161
Cdd:cd02194   79 LGFLLSLGLPpDTDEEWLEEFYRGLAEAADRYGVPLVGGDTTSGsELVISVTALGEVEKGKPLRRSGAKPGDLLYVTGTL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 162 GDSAAGLAILQNRLQVaDAKDADYLIKRHLRPSPRILQGQALRD-LANSAIDLSDGLISDLGHIVKASDCGARIDLALLP 240
Cdd:cd02194  159 GDAAAGLALLLGGLKL-PEELYEELIERHLRPEPRLELGRALAEgLATAMIDISDGLLADLGHIAEASGVGAVIDLDKLP 237
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446664761 241 FSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDValgHLGVPFTCIGQMT 297
Cdd:cd02194  238 LSPALRAAELGEDALELALSGGEDYELLFTVPPENAEAAAA---KLGVPVTVIGRVT 291
AIRS pfam00586
AIR synthase related protein, N-terminal domain; This family includes Hydrogen expression ...
29-138 2.01e-17

AIR synthase related protein, N-terminal domain; This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.


Pssm-ID: 459859 [Multi-domain]  Cd Length: 104  Bit Score: 76.33  E-value: 2.01e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   29 DDCALlnipekqtlAISTD-----TLVAGNHFLpdidpadlAYKALAVNLSDLAAMGADPAWLTLALTLP--DVDEAWLE 101
Cdd:pfam00586   1 DDAAV---------AVTTDghgtpSLVDPYHFP--------GAKAVAGNLSDIAAMGARPLAFLDSLALPggPEVEWVLE 63
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 446664761  102 SFSDSLFDLLNYYDMQLIGGDTTRGP----LSMTLGIHGFV 138
Cdd:pfam00586  64 EIVEGIAEACREAGVPLVGGDTSFDPeggkPTISVTAVGIV 104
 
Name Accession Description Interval E-value
PRK05731 PRK05731
thiamine monophosphate kinase; Provisional
1-322 5.66e-173

thiamine monophosphate kinase; Provisional


Pssm-ID: 235583 [Multi-domain]  Cd Length: 318  Bit Score: 482.02  E-value: 5.66e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   1 MACGEFSLIARYFDRVRSSRLdveLGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPD-IDPADLAYKALAVNLSDLAAM 79
Cdd:PRK05731   1 MAMGEFDLIARLFARRPSSRE---LGIGDDAALLGPPPGQRLVVSTDMLVEGVHFRPDwSSPEDLGYKALAVNLSDLAAM 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  80 GADPAWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGP-LSMTLGIHGFVPMGRALTRSGAKPGDWIYV 157
Cdd:PRK05731  78 GARPAAFLLALALPkDLDEAWLEALADGLFELADRYGAELIGGDTTRGPdLSISVTAIGDVPGGRALRRSGAKPGDLVAV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 158 TGTPGDSAAGLAILQNRLQVADAkDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGARIDLA 237
Cdd:PRK05731 158 TGTLGDSAAGLALLLNGLRVPDA-DAAALISRHLRPQPRVGLGQALAGLASAAIDISDGLAADLGHIAEASGVGADIDLD 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 238 LLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTAdieGLCFIRDGEPVTFDWK 317
Cdd:PRK05731 237 ALPISPALREAAEGEDALRWALSGGEDYELLFTFPPENRGALLAAAGHLGVGVTIIGRVTE---GEGVVVDGEPVTLDLK 313

                 ....*
gi 446664761 318 GYDHF 322
Cdd:PRK05731 314 GYDHF 318
ThiL COG0611
Thiamine monophosphate kinase [Coenzyme transport and metabolism]; Thiamine monophosphate ...
3-322 8.74e-153

Thiamine monophosphate kinase [Coenzyme transport and metabolism]; Thiamine monophosphate kinase is part of the Pathway/BioSystem: Thiamine biosynthesis


Pssm-ID: 440376 [Multi-domain]  Cd Length: 321  Bit Score: 431.11  E-value: 8.74e-153
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   3 CGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQtLAISTDTLVAGNHFLPD-IDPADLAYKALAVNLSDLAAMGA 81
Cdd:COG0611    1 MGEFGLIERLFKRLALRGPDVLLGIGDDAAVLDPPGGR-LVVTTDMLVEGVHFPLDwMSPEDLGWKAVAVNLSDLAAMGA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  82 DPAWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGP-LSMTLGIHGFVPMGRALTRSGAKPGDWIYVTG 159
Cdd:COG0611   80 RPLAALLSLALPpDTDVEWLEEFARGLAEAADRYGVDLVGGDTTRSPeLTISVTAIGEVPGGRPLLRSGARPGDLVYVTG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 160 TPGDSAAGLAILQNRLQVADAkDADYLIKRHLRPSPRILQGQALR--DLANSAIDLSDGLISDLGHIVKASDCGARIDLA 237
Cdd:COG0611  160 TLGDAAAGLALLLRGLRVPLE-AREYLLERHLRPEPRLALGRALAeaGLATAMIDISDGLAADLGHIAEASGVGAEIDLD 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 238 LLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALghLGVPFTCIGQMTADIEGLCFIRDGEPVTFDWK 317
Cdd:COG0611  239 ALPLSPALREAALGLDPLELALTGGEDYELLFTVPPEALEALEAAA--LGVPLTVIGRVTEGEGVTLDDADGRPIPLEAR 316

                 ....*
gi 446664761 318 GYDHF 322
Cdd:COG0611  317 GWDHF 321
thiL TIGR01379
thiamine-phosphate kinase; This model describes thiamine-monophosphate kinase, an enzyme that ...
4-322 4.09e-149

thiamine-phosphate kinase; This model describes thiamine-monophosphate kinase, an enzyme that converts thiamine monophosphate into thiamine pyrophosphate (TPP, coenzyme B1), an enzyme cofactor. Thiamine monophosphate may be derived from de novo synthesis or from unphosphorylated thiamine, known as vitamin B1. Proteins scoring between the trusted and noise cutoff for this model include short forms from the Thermoplasmas (which lack the N-terminal region) and a highly derived form from Campylobacter jejuni. Eukaryotes lack this enzyme, and add pyrophosphate from ATP to unphosphorylated thiamine in a single step. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]


Pssm-ID: 273589 [Multi-domain]  Cd Length: 317  Bit Score: 421.74  E-value: 4.09e-149
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761    4 GEFSLIARYFDRvRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADP 83
Cdd:TIGR01379   1 GEFELIDRILRR-LVQDPDVALGIGDDAALVSAPEGRDLVLTTDTLVEGVHFPPDTTPEDLGWKAVAVNLSDLAAMGATP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   84 AWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGP-LSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTP 161
Cdd:TIGR01379  80 KWFLLSLGLPsDLDEAWLEAFYDGLFEAAKQYGVPLVGGDTVSSPeLVVTVTAIGEAPKGRALLRSGAKPGDLVFVTGTL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  162 GDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGARIDLALLPF 241
Cdd:TIGR01379 160 GDSAAGLALLLKGKKEPDEEDDEALLQRHLRPEPRVEEGLALAGYANAAIDVSDGLAADLGHIAEASGVGIVIDLDRLPL 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  242 SDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHlgvPFTCIGQMTADIEGLCFIRDGEPVTFDWKGYDH 321
Cdd:TIGR01379 240 SSELAAWAEGKNPLEWALSGGEDYELVFTVPPERREALLDAAKG---PLTRIGRVTEGEGVVLLADGKTVELLDRLGWQH 316

                  .
gi 446664761  322 F 322
Cdd:TIGR01379 317 F 317
ThiL cd02194
ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage ...
4-297 5.00e-133

ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine. Thiamine salvage occurs in two steps, with thiamine kinase catalyzing the formation of thiamine phosphate, and ThiL catalyzing the conversion of this intermediate to thiamine pyrophosphate. The N-terminal domain of ThiL binds ATP and is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, FGAM synthase and selenophosphate synthetase (SelD).


Pssm-ID: 100030 [Multi-domain]  Cd Length: 291  Bit Score: 379.98  E-value: 5.00e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   4 GEFSLIARYFDRVRSSRlDVELGIGDDCALLNIPEKQtLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADP 83
Cdd:cd02194    1 GEFELIDRLFKRLGAGP-GVLLGIGDDAAVLKPPGGR-LVVTTDTLVEGVHFPPDTTPEDIGWKALAVNLSDLAAMGARP 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  84 AWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRG-PLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTP 161
Cdd:cd02194   79 LGFLLSLGLPpDTDEEWLEEFYRGLAEAADRYGVPLVGGDTTSGsELVISVTALGEVEKGKPLRRSGAKPGDLLYVTGTL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 162 GDSAAGLAILQNRLQVaDAKDADYLIKRHLRPSPRILQGQALRD-LANSAIDLSDGLISDLGHIVKASDCGARIDLALLP 240
Cdd:cd02194  159 GDAAAGLALLLGGLKL-PEELYEELIERHLRPEPRLELGRALAEgLATAMIDISDGLLADLGHIAEASGVGAVIDLDKLP 237
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446664761 241 FSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDValgHLGVPFTCIGQMT 297
Cdd:cd02194  238 LSPALRAAELGEDALELALSGGEDYELLFTVPPENAEAAAA---KLGVPVTVIGRVT 291
HypE COG0309
Carbamoyl dehydratase HypE (hydrogenase maturation factor) [Posttranslational modification, ...
7-244 2.84e-21

Carbamoyl dehydratase HypE (hydrogenase maturation factor) [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440078 [Multi-domain]  Cd Length: 328  Bit Score: 92.44  E-value: 2.84e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   7 SLIARYFdrvrSSRLDVE-LGIGDDCALLNIPEKqTLAISTDTLVAGNHFLPDIDPADLAYkalAVNLSDLAAMGADPAW 85
Cdd:COG0309   12 ELIEELF----LPALGNEvLVGGEDAAVLDLGGG-RLAFTTDSFVVSPIFFPGGDIGKLAV---HGTVNDLAVSGAKPLY 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  86 LTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTR-------GPLSMTLGIhGFVPMGRALTRSGAKPGDWIYV 157
Cdd:COG0309   84 LSVSLILEeGFPLEDLERIVESMAEAAREAGVSIVTGDTKVverggvdGPFINTTGI-GVVPKGRLISPSGARPGDKIIV 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 158 TGTPGDSaaGLAILQNRLQ-------VADAKDADYLIkrhlrpsprilqgQALRDLANSAID-LSD----GLISDLGHIV 225
Cdd:COG0309  163 TGGIGDH--GTAILAAREGlelegelLSDAAPLNDLV-------------SVLLEAAPGGVHaMRDptrgGLAGALNEIA 227
                        250
                 ....*....|....*....
gi 446664761 226 KASDCGARIDLALLPFSDA 244
Cdd:COG0309  228 EASGVGIEIDEDAIPVRPE 246
PurM-like cd00396
AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen ...
42-295 1.11e-20

AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.


Pssm-ID: 100027 [Multi-domain]  Cd Length: 222  Bit Score: 88.61  E-value: 1.11e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  42 LAISTDTLVAGnhflPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLP-DVDEAWLESFSDSLFDLLNYYDMQLIG 120
Cdd:cd00396    2 LAMSTDGINPP----LAINPWAGGRLAVGGAVNDIAAMGARPIALLASLSLSnGLEVDILEDVVDGVAEACNQLGVPIVG 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 121 GDTTRGP------LSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTpgDSAAGLailqnrlqvadakdadylikrhlrps 194
Cdd:cd00396   78 GHTSVSPgtmghkLSLAVFAIGVVEKDRVIDSSGARPGDVLILTGV--DAVLEL-------------------------- 129
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 195 prilqgQALRDLaNSAIDLSD-GLISDLGHIVKASDCGARIDLALLPfSDALSRHVEPEQALrWALSGGEDYELCFTVPE 273
Cdd:cd00396  130 ------VAAGDV-HAMHDITDgGLLGTLPELAQASGVGAEIDLEAIP-LDEVVRWLCVEHIE-EALLFNSSGGLLIAVPA 200
                        250       260
                 ....*....|....*....|..
gi 446664761 274 LNRGALDVALGHLGVPFTCIGQ 295
Cdd:cd00396  201 EEADAVLLLLNGNGIDAAVIGR 222
SelD cd02195
Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate ...
20-241 2.44e-19

Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes. The N-terminal domain of SelD is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, and FGAM synthase and is thought to bind ATP.


Pssm-ID: 100031 [Multi-domain]  Cd Length: 287  Bit Score: 86.04  E-value: 2.44e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  20 RLDVELGIGDDCALLNIPEKQTLAISTDtlvagnHFLPDI-DPADLAyKALAVN-LSDLAAMGADP----AWLTLALTLP 93
Cdd:cd02195   33 NLLVGLGTGDDAAVYRLPGGLALVQTTD------FFPPIVdDPYLFG-RIAAANaLSDIYAMGAKPlsalAIVTLPRKLP 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  94 DVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGP-LSMTLGIHGFVPMGRALTRSGAKPGDWIYVT---GTpgdsaaGLA 169
Cdd:cd02195  106 ALQEEVLREILAGGKDKLREAGAVLVGGHTIEGPePKYGLSVTGLVHPNKILRNSGAKPGDVLILTkplGT------GIL 179
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446664761 170 ILQNRLQVADAKDADYLIKrHLRPSPRILQGQALRDLANSAIDLSD-GLisdLGH---IVKASDCGARIDLALLPF 241
Cdd:cd02195  180 FAAEMAGLARGEDIDAALE-SMARLNRAAAELLRKYGAHACTDVTGfGL---LGHlleMARASGVSAEIDLDKLPL 251
PurM-like1 cd06061
AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM ...
26-294 2.53e-19

AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.


Pssm-ID: 100037 [Multi-domain]  Cd Length: 298  Bit Score: 86.50  E-value: 2.53e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  26 GIGDDCALLNIPEKqTLAISTD-TLVAGNhflpdidpaDLAYKALAVNLSDLAAMGADPAWLTLALTLPD-VDEAWLESF 103
Cdd:cd06061   30 GGGEDAAVVDFGGK-VLVVSTDpITGAGK---------DAGWLAVHIAANDIATSGARPRWLLVTLLLPPgTDEEELKAI 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 104 SDSLFDLLNYYDMQLIGGDTTRGP------LSMTLgiHGFVPMGRALTRSGAKPGDWIYVTGTPGDSAAGLAILQNRLQV 177
Cdd:cd06061  100 MREINEAAKELGVSIVGGHTEVTPgvtrpiISVTA--IGKGEKDKLVTPSGAKPGDDIVMTKGAGIEGTAILANDFEEEL 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 178 ADAKDADYLIKRHLRPSPRILQGQAL---RDLANSAIDLSD-GLISDLGHIVKASDCGARIDLALLPFSDALSR-----H 248
Cdd:cd06061  178 KKRLSEEELREAAKLFYKISVVKEALiaaEAGVTAMHDATEgGILGALWEVAEASGVGLRIEKDKIPIRQETKEicealG 257
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 446664761 249 VEPeqalrWAL-SGGedyELCFTVPELNRGALDVALGHLGVPFTCIG 294
Cdd:cd06061  258 IDP-----LRLiSSG---TLLITVPPEKGDELVDALEEAGIPASVIG 296
AIRS pfam00586
AIR synthase related protein, N-terminal domain; This family includes Hydrogen expression ...
29-138 2.01e-17

AIR synthase related protein, N-terminal domain; This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.


Pssm-ID: 459859 [Multi-domain]  Cd Length: 104  Bit Score: 76.33  E-value: 2.01e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   29 DDCALlnipekqtlAISTD-----TLVAGNHFLpdidpadlAYKALAVNLSDLAAMGADPAWLTLALTLP--DVDEAWLE 101
Cdd:pfam00586   1 DDAAV---------AVTTDghgtpSLVDPYHFP--------GAKAVAGNLSDIAAMGARPLAFLDSLALPggPEVEWVLE 63
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 446664761  102 SFSDSLFDLLNYYDMQLIGGDTTRGP----LSMTLGIHGFV 138
Cdd:pfam00586  64 EIVEGIAEACREAGVPLVGGDTSFDPeggkPTISVTAVGIV 104
HypE cd02197
HypE (Hydrogenase expression/formation protein). HypE is involved in Ni-Fe hydrogenase ...
7-244 1.85e-12

HypE (Hydrogenase expression/formation protein). HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the ATP-binding domains of the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP.


Pssm-ID: 100033 [Multi-domain]  Cd Length: 293  Bit Score: 66.70  E-value: 1.85e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   7 SLIARYFDrvrssrlDVELGIGDDCALLNIPEKqTLAISTDTLVAGNHFLP--DIDpadlaykALAVN--LSDLAAMGAD 82
Cdd:cd02197   12 ELFLKAFD-------NPILEVLEDAAALLVGGG-RLAFTTDSFVVSPLFFPggDIG-------KLAVCgtVNDLAMMGAK 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  83 PAWLTLALTLP---DVDEawLESFSDSLFDLLNYYDMQLIGGDTT---RGPLS----MTLGIhGFVPMGRALTRSGAKPG 152
Cdd:cd02197   77 PLYLSLGFILEegfPLED--LERIVKSMAEAAREAGVKIVTGDTKvvpKGKADgifiNTTGI-GVIPRGVIISPSNIRPG 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 153 DWIYVTGTPGDSaaGLAILQNRLQVA-------DAKDADYLIKRHLRPSPRIlqgQALRDLANSaidlsdGLISDLGHIV 225
Cdd:cd02197  154 DKIIVSGTIGDH--GAAILAAREGLGfetdiesDCAPLNGLVEALLEAGPGI---HAMRDPTRG------GLAAVLNEIA 222
                        250
                 ....*....|....*....
gi 446664761 226 KASDCGARIDLALLPFSDA 244
Cdd:cd02197  223 RASGVGIEIEEEAIPVREE 241
PurL1 COG0046
Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and ...
29-312 5.03e-11

Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism]; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439816 [Multi-domain]  Cd Length: 747  Bit Score: 63.53  E-value: 5.03e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  29 DDCALLNIPEKQT-LAISTDtlvaGNHFLPDIDPADLAYKALAVNLSDLAAMGADPawltLALTL---------PDVDEA 98
Cdd:COG0046  443 ADAAVVRVDGTYKgLAMSTG----ENPRYALLDPYAGARMAVAEAARNLAAVGAEP----LAITDclnwgnpekPEEMAQ 514
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  99 wlesFSDS---LFDLLNYYDMQLIGG------DTTRG----PLSMTLGIHGFVP-MGRALTRSGAKPGDWIYVTGTPGDS 164
Cdd:COG0046  515 ----LVEAvkgLADACRALGIPVPSGnvslynETKDGkvaiPPTPVIGAVGLVDdVRKTVTPDLKKEGDLLYLIGETKNE 590
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 165 AAGLAILQNRLQVADAK---DADYLIKRHlrpspRILQGQALRDLANSAIDLSDG-LISDLGHIVKASDCGARIDLALLP 240
Cdd:COG0046  591 LGGSEYAQVLGQLGGEPpdvDLEAEKALF-----EAVQELIREGLILAAHDVSDGgLAVALAEMAFAGGLGADIDLDALG 665
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 241 --------FSDALSRHVepeqalrwalsggedyelcFTVPELNRGALDVALGHLGVPFTCIGQMTADiEGLCFIRDGEPV 312
Cdd:COG0046  666 dlrpdaalFSESQGRAV-------------------VQVAPEDAEAVEALLAEAGLPAHVIGTVTGD-DRLVIRRGGETL 725
PurM-like3 cd02192
AIR synthase (PurM) related protein, subgroup 3 of unknown function. The family of PurM ...
9-240 1.31e-10

AIR synthase (PurM) related protein, subgroup 3 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.


Pssm-ID: 100028 [Multi-domain]  Cd Length: 283  Bit Score: 61.07  E-value: 1.31e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   9 IARYFDRVRSSRLDVELGIGDDCALLNIPekqtlaiSTDTLVAGNHFLPDI---DPADLAYKALAVNLSDLAAMGADPAW 85
Cdd:cd02192   16 VVAILPDAPFDSLGVAADLGDDAAAIPDG-------DGYLLLAADGIWPSLveaDPWWAGYCSVLVNVSDIAAMGGRPLA 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  86 LTLALTLPDVDEAwlESFSDSLFDLLNYYDMQLIGG----DTTRGPLSMT-LGIHGfvpmGRALTRSGAKPGDWIYVT-- 158
Cdd:cd02192   89 MVDALWSPSAEAA--AQVLEGMRDAAEKFGVPIVGGhthpDSPYNALSVAiLGRAR----KDLLISFGAKPGDRLILAid 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 159 --GTPG-------DSAAGlailqnrlqvadaKDADYLiKRHLrpspRILQGQALRDLANSAIDLSD-GLISDLGHIVKAS 228
Cdd:cd02192  163 ldGRVHpspppnwDATTM-------------KSPALL-RRQI----ALLPELAERGLVHAAKDISNpGIIGTLGMLLEAS 224
                        250
                 ....*....|..
gi 446664761 229 DCGARIDLALLP 240
Cdd:cd02192  225 GVGAEIDLDAIP 236
AIRS_C pfam02769
AIR synthase related protein, C-terminal domain; This family includes Hydrogen expression ...
150-299 7.47e-10

AIR synthase related protein, C-terminal domain; This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The function of the C-terminal domain of AIR synthase is unclear, but the cleft formed between N and C domains is postulated as a sulphate binding site.


Pssm-ID: 460684 [Multi-domain]  Cd Length: 152  Bit Score: 56.59  E-value: 7.47e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  150 KPGDWIYVTGTPGDSAAGLAiLQNRLQVADAKDADYLIKRHLRPSP--RILQGQALRDLANSAIDLSD-GLISDLGHIVK 226
Cdd:pfam02769   1 KPGDVLILLGSSGLHGAGLS-LSRKGLEDSGLAAVQLGDPLLEPTLiyVKLLLAALGGLVKAMHDITGgGLAGALAEMAP 79
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446664761  227 ASDCGARIDLALLPFSDALSRHVEPeqalrwALSGGEDYELCFTVPELNRGALDVALGHlGVPFTCIGQMTAD 299
Cdd:pfam02769  80 ASGVGAEIDLDKVPIFEELMLPLEM------LLSENQGRGLVVVAPEEAEAVLAILEKE-GLEAAVIGEVTAG 145
PurL_repeat2 cd02204
PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat. ...
30-295 7.77e-09

PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat. FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.


Pssm-ID: 100035 [Multi-domain]  Cd Length: 264  Bit Score: 55.62  E-value: 7.77e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  30 DCALLNIPE--KQTLAISTDtlvaGNHFLPDIDPADLAYKALAVNLSDLAAMGADPawltLALTL--------PDVDEAW 99
Cdd:cd02204    1 DAAVLRIPGetDKGLAMSTG----ENPRYSLLDPYAGAALAVAEAVRNLVAVGADP----LAITDclnfgnpeKPEGEMG 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 100 leSFSDS---LFDLLNYYDMQLIGG------DTTRGPLSMTLGIHGFVPMG---RALTRSGAKPGDWIYVTGTP----GD 163
Cdd:cd02204   73 --QLVEAvlgLGDACRALGTPVIGGkdslynETEGVAIPPTLVIGAVGVVDdvrKIVTLDFKKEGDLLYLIGETkdelGG 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 164 SAAGLAILQNRLQVADAKDADYLIKRHlrpspRILQGQALRDLANSAIDLSD-GLISDLGHIVKASDCGARIDLALLP-- 240
Cdd:cd02204  151 SEYALAYHGLGGGAPPLVDLEREKALF-----DAVQELIKEGLVLSAHDVSDgGLAVALAEMAFAGGLGAEVDLSKDDae 225
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446664761 241 ----FSDALSRHVepeqalrwalsggedyelcFTVPELNrgALDVALGHLGVPFTCIGQ 295
Cdd:cd02204  226 dellFSESLGRVL-------------------VEVKPEN--EEVFEAEEAGVPATVIGT 263
SelD COG0709
Selenophosphate synthase [Amino acid transport and metabolism];
20-298 4.87e-08

Selenophosphate synthase [Amino acid transport and metabolism];


Pssm-ID: 440473 [Multi-domain]  Cd Length: 346  Bit Score: 53.54  E-value: 4.87e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  20 RLDVELGIGDDCALLNIPEKQTLAISTDtlvagnHFLPDI-DPADLAYKAlAVN-LSDLAAMGADP--AWLTLALTLPDV 95
Cdd:COG0709   39 NLLVGLETSDDAAVYRLGDDQALVQTTD------FFTPIVdDPYDFGRIA-AANaLSDVYAMGGRPltALAIVGFPIDKL 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  96 DEAWLESFSDSLFDLLNYYDMQLIGGDTTRGP-----LSMTlgihGFVPMGRALTRSGAKPGDWIYVT---GTpgdsaaG 167
Cdd:COG0709  112 PEEVLAEILAGGADKCREAGAPLAGGHSIDDPepkygLAVT----GLVHPDKVLRNAGARPGDVLILTkplGT------G 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 168 L---AILQNRLQVADAKDADYLIKRHLRPSPRILQGQAlrdlANSAIDLSD-GLisdLGH---IVKASDCGARIDLALLP 240
Cdd:COG0709  182 IlttAIKAGLADGEDIAAAIASMTTLNKAAAELARLYG----VHACTDVTGfGL---LGHlleMARGSGVSAEIDLDAVP 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 241 F--------------------SDALSRHVEPEQAL---RWAL------SGGedyeLCFTVPELNRGALDVALGHLGVPFT 291
Cdd:COG0709  255 LlpgalelaeqgivpggtyrnRASYGAKVEFAEGLdeaQRDLlfdpqtSGG----LLIAVPPEAAEELLAALRAAGYAAA 330

                 ....*..
gi 446664761 292 CIGQMTA 298
Cdd:COG0709  331 IIGEVTA 337
COG2144 COG2144
Selenophosphate synthetase-related protein [General function prediction only];
9-240 6.64e-08

Selenophosphate synthetase-related protein [General function prediction only];


Pssm-ID: 441747 [Multi-domain]  Cd Length: 323  Bit Score: 53.24  E-value: 6.64e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761   9 IARYFDRVRSsrLDVELGIGDDCALLNIPEKqtlaistDTLVAGNHFLPDI---DPADLAYKALAVNLSDLAAMGADPAW 85
Cdd:COG2144   26 VVRALGLASS--GGTAAAFGDDAAAIPDGDG-------YLLLAAEGIWPKFveaDPWFAGYCSVLVNVSDIAAMGGRPLA 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  86 LTLALTLPDVDEAwlESFSDSLFDLLNYYDMQLIGG----DTTRGPLSMTlgIHGFVPmgRALTRSGAKPGDWIYV---- 157
Cdd:COG2144   97 VVDALWSSDEEAA--APVLAGMRAASRKFGVPIVGGhthpDTPYNALAVA--ILGRAK--KLLTSFTARPGDRLIAaidl 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 158 TGTPG------DSAAGlailqnrlqvadaKDADYLiKRHLRPSPRIlqgqALRDLANSAIDLSD-GLISDLGHIVKASDC 230
Cdd:COG2144  171 DGRYHppfpywDATTG-------------KPPERL-RAQLELLPEL----AEAGLVTAAKDISNpGIIGTLGMLLECSGV 232
                        250
                 ....*....|
gi 446664761 231 GARIDLALLP 240
Cdd:COG2144  233 GATIDLDAIP 242
PRK14105 PRK14105
selenide, water dikinase SelD;
22-247 6.79e-07

selenide, water dikinase SelD;


Pssm-ID: 237611 [Multi-domain]  Cd Length: 345  Bit Score: 50.16  E-value: 6.79e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  22 DVELGIGDDCALLnipEKQTLAISTDTLVagnhFLPDIDPADLAYKALAVN-LSDLAAMGADPAWLTLA-------LTLP 93
Cdd:PRK14105  41 HTKVGLGDDAAVI---IKNGLAIVKTVDV----FTPIVDDPYIQGKIAACNsTSDVYAMGLSEIIGVLVilgippeLPIE 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761  94 DVDEAwLESFSDSLFDLlnyyDMQLIGGDTTRGPLSMTLG-IHGFVPMGRALTRSGAKPGDWIYVTGTPGDSAAgLAILQ 172
Cdd:PRK14105 114 VAKEM-LQGFQDFCREN----DTTIIGGHTILNPWPLIGGaVTGVGKEEDILTKAGAKEGDVLILTKPLGTQSA-MALSR 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 173 -----NRLQVADAKDADYLIKR--HLRPSPRILQGQALRDLANSAIDLSDGLISD------LGH---IVKASDCGARID- 235
Cdd:PRK14105 188 vpeefEDLIDITKEEKEYIINKaiELMTTSNRYALLALREAEEEVGEKIANAMTDvtgfgiLGHsqeMAEQSNVEIEISt 267
                        250
                 ....*....|..
gi 446664761 236 LALLPFSDALSR 247
Cdd:PRK14105 268 LPVIKGTPELSS 279
PRK01213 PRK01213
phosphoribosylformylglycinamidine synthase subunit PurL;
142-300 4.39e-04

phosphoribosylformylglycinamidine synthase subunit PurL;


Pssm-ID: 234921 [Multi-domain]  Cd Length: 724  Bit Score: 42.01  E-value: 4.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 142 RALTRSGAKPGDWIYVTGTPGDSAAG---LAILQNRLQvADAKDADY-LIKRHLRpsprILQGQALRDLANSAIDLSDG- 216
Cdd:PRK01213 551 KRTTSGFKKEGDLIYLLGETKDELGGseyLKVIHGHVG-GRPPKVDLeAEKRLQE----LVREAIREGLVTSAHDVSEGg 625
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446664761 217 LISDLGHIVKASDCGARIDL-------ALLpFSDALSRHVepeqalrwalsggedyelcFTVPELNRGALDVALGHLGVP 289
Cdd:PRK01213 626 LAVALAEMAIAGGLGAEVDLsdglrpdALL-FSESQGRYV-------------------VSVPPENEEAFEALAEAAGVP 685
                        170
                 ....*....|.
gi 446664761 290 FTCIGQMTADI 300
Cdd:PRK01213 686 ATRIGVVGGDA 696
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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