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Conserved domains on  [gi|446670453|ref|WP_000747799|]
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DUF1433 domain-containing protein [Staphylococcus aureus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1433 super family cl06332
Protein of unknown function (DUF1433); This family contains a number of hypothetical bacterial ...
 32-122 1.97e-15

Protein of unknown function (DUF1433); This family contains a number of hypothetical bacterial proteins of unknown function approximately 100 residues in length.


The actual alignment was detected with superfamily member pfam07252:

Pssm-ID: 284628  Cd Length: 88  Bit Score: 66.73  E-value: 1.97e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446670453   32 YIETQEKRIDLYFKHNLNNYKNMKVTDFHKTPMGGYFIVGYINDDKKYKFQASIDSGSNNQYQKDIGYhEDKLGKLFKek 111
Cdd:pfam07252   1 YYKEQQERITKYLKYNTKGIKSVTFTNLKTSPMGIPVIEGYINNNKDLDFVAYISPEENFQFGGALSK-SGELDKLLK-- 77

                          90
                  ....*....|.
gi 446670453  112 dPKYKlSVDEI 122
Cdd:pfam07252  78 -SPEK-SVSEI 86
 
Name Accession Description Interval E-value
DUF1433 pfam07252
Protein of unknown function (DUF1433); This family contains a number of hypothetical bacterial ...
 32-122 1.97e-15

Protein of unknown function (DUF1433); This family contains a number of hypothetical bacterial proteins of unknown function approximately 100 residues in length.


Pssm-ID: 284628  Cd Length: 88  Bit Score: 66.73  E-value: 1.97e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446670453   32 YIETQEKRIDLYFKHNLNNYKNMKVTDFHKTPMGGYFIVGYINDDKKYKFQASIDSGSNNQYQKDIGYhEDKLGKLFKek 111
Cdd:pfam07252   1 YYKEQQERITKYLKYNTKGIKSVTFTNLKTSPMGIPVIEGYINNNKDLDFVAYISPEENFQFGGALSK-SGELDKLLK-- 77

                          90
                  ....*....|.
gi 446670453  112 dPKYKlSVDEI 122
Cdd:pfam07252  78 -SPEK-SVSEI 86
 
Name Accession Description Interval E-value
DUF1433 pfam07252
Protein of unknown function (DUF1433); This family contains a number of hypothetical bacterial ...
 32-122 1.97e-15

Protein of unknown function (DUF1433); This family contains a number of hypothetical bacterial proteins of unknown function approximately 100 residues in length.


Pssm-ID: 284628  Cd Length: 88  Bit Score: 66.73  E-value: 1.97e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446670453   32 YIETQEKRIDLYFKHNLNNYKNMKVTDFHKTPMGGYFIVGYINDDKKYKFQASIDSGSNNQYQKDIGYhEDKLGKLFKek 111
Cdd:pfam07252   1 YYKEQQERITKYLKYNTKGIKSVTFTNLKTSPMGIPVIEGYINNNKDLDFVAYISPEENFQFGGALSK-SGELDKLLK-- 77

                          90
                  ....*....|.
gi 446670453  112 dPKYKlSVDEI 122
Cdd:pfam07252  78 -SPEK-SVSEI 86
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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