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Conserved domains on  [gi|446693979|ref|WP_000771325|]
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DUF2502 domain-containing protein [Escherichia fergusonii]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2502 super family cl11294
Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The ...
 25-94 1.93e-12

Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The function is not known.


The actual alignment was detected with superfamily member pfam10697:

Pssm-ID: 431443  Cd Length: 90  Bit Score: 57.70  E-value: 1.93e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446693979  25 EITLVPAVKLQIGDRDNRGYYWDGGYWRDHGWWNKH------------YEWRGNRWHRHAPPPPRHH-----KPNKHHND 87
Cdd:pfam10697  1 SIDLLPSISLQIGDQDDRGNYWDGYDWRDRQWWHNHrgahigernergYYWDGNRWQRHDNGYRKAYerggrEPWRDRDK 80


                 ....*..
gi 446693979  88 HRGDHGP 94
Cdd:pfam10697 81 HGGRGRP 87
 
Name Accession Description Interval E-value
DUF2502 pfam10697
Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The ...
 25-94 1.93e-12

Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The function is not known.


Pssm-ID: 431443  Cd Length: 90  Bit Score: 57.70  E-value: 1.93e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446693979  25 EITLVPAVKLQIGDRDNRGYYWDGGYWRDHGWWNKH------------YEWRGNRWHRHAPPPPRHH-----KPNKHHND 87
Cdd:pfam10697  1 SIDLLPSISLQIGDQDDRGNYWDGYDWRDRQWWHNHrgahigernergYYWDGNRWQRHDNGYRKAYerggrEPWRDRDK 80


                 ....*..
gi 446693979  88 HRGDHGP 94
Cdd:pfam10697 81 HGGRGRP 87
 
Name Accession Description Interval E-value
DUF2502 pfam10697
Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The ...
 25-94 1.93e-12

Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The function is not known.


Pssm-ID: 431443  Cd Length: 90  Bit Score: 57.70  E-value: 1.93e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446693979  25 EITLVPAVKLQIGDRDNRGYYWDGGYWRDHGWWNKH------------YEWRGNRWHRHAPPPPRHH-----KPNKHHND 87
Cdd:pfam10697  1 SIDLLPSISLQIGDQDDRGNYWDGYDWRDRQWWHNHrgahigernergYYWDGNRWQRHDNGYRKAYerggrEPWRDRDK 80


                 ....*..
gi 446693979  88 HRGDHGP 94
Cdd:pfam10697 81 HGGRGRP 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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