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Conserved domains on  [gi|446714757|ref|WP_000792088|]
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MULTISPECIES: lipoprotein [Enterobacterales]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MalE super family cl43634
Maltose-binding periplasmic protein MalE [Carbohydrate transport and metabolism];
1-90 4.66e-03

Maltose-binding periplasmic protein MalE [Carbohydrate transport and metabolism];


The actual alignment was detected with superfamily member COG2182:

Pssm-ID: 441785 [Multi-domain]  Cd Length: 410  Bit Score: 38.01  E-value: 4.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446714757   1 MKNKRFVSLVSALVASASLVGCAGNAGQSPNSAQHSDTHGLY-WHANAKDSVAKNAYSlagfdvSFNEET-----VQPgG 74
Cdd:COG2182    1 MKRRLLAALALALALALALAACGSGSSSSGSSSAAGAGGTLTvWVDDDEAEALEEAAA------AFEEEPgikvkVVE-V 73

                         90
                 ....*....|....*.
gi 446714757  75 DADNFLSKLLISGSMG 90
Cdd:COG2182   74 PWDDLREKLTTAAPAG 89
 
Name Accession Description Interval E-value
MalE COG2182
Maltose-binding periplasmic protein MalE [Carbohydrate transport and metabolism];
1-90 4.66e-03

Maltose-binding periplasmic protein MalE [Carbohydrate transport and metabolism];


Pssm-ID: 441785 [Multi-domain]  Cd Length: 410  Bit Score: 38.01  E-value: 4.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446714757   1 MKNKRFVSLVSALVASASLVGCAGNAGQSPNSAQHSDTHGLY-WHANAKDSVAKNAYSlagfdvSFNEET-----VQPgG 74
Cdd:COG2182    1 MKRRLLAALALALALALALAACGSGSSSSGSSSAAGAGGTLTvWVDDDEAEALEEAAA------AFEEEPgikvkVVE-V 73

                         90
                 ....*....|....*.
gi 446714757  75 DADNFLSKLLISGSMG 90
Cdd:COG2182   74 PWDDLREKLTTAAPAG 89
 
Name Accession Description Interval E-value
MalE COG2182
Maltose-binding periplasmic protein MalE [Carbohydrate transport and metabolism];
1-90 4.66e-03

Maltose-binding periplasmic protein MalE [Carbohydrate transport and metabolism];


Pssm-ID: 441785 [Multi-domain]  Cd Length: 410  Bit Score: 38.01  E-value: 4.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446714757   1 MKNKRFVSLVSALVASASLVGCAGNAGQSPNSAQHSDTHGLY-WHANAKDSVAKNAYSlagfdvSFNEET-----VQPgG 74
Cdd:COG2182    1 MKRRLLAALALALALALALAACGSGSSSSGSSSAAGAGGTLTvWVDDDEAEALEEAAA------AFEEEPgikvkVVE-V 73

                         90
                 ....*....|....*.
gi 446714757  75 DADNFLSKLLISGSMG 90
Cdd:COG2182   74 PWDDLREKLTTAAPAG 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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