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Conserved domains on  [gi|446725932|ref|WP_000803245|]
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MULTISPECIES: gamma-glutamyl-gamma-aminobutyrate hydrolase family protein [Bacillus]

Protein Classification

gamma-glutamyl-gamma-aminobutyrate hydrolase family protein( domain architecture ID 11449689)

gamma-glutamyl-gamma-aminobutyrate hydrolase family protein may catalyze the hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma-aminobutyrate, an important step in putrescine degradation

CATH:  3.40.50.880
EC:  3.-.-.-
Gene Ontology:  GO:0016787|GO:0016811
MEROPS:  C26
PubMed:  11517925|15590624

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PuuD COG2071
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains ...
22-247 1.09e-100

Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains GATase1-like domain [Amino acid transport and metabolism];


:

Pssm-ID: 441674 [Multi-domain]  Cd Length: 231  Bit Score: 292.46  E-value: 1.09e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  22 LRGLPGQDMALFSYDYIRSLQRAGATVVLLPI-EGVDQIESTLNQLDGLLLAGGADINPIYYGDTPKSYIGTVEEERDNF 100
Cdd:COG2071    5 LRTAGGYPAHYLPEDYVRAVRAAGGLPVLLPPvGDEEDLDELLDRLDGLVLTGGADVDPALYGEEPHPELGPIDPERDAF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 101 ELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQDLeHEMGPEYFHVREQFRKWQGSHSVDLLEEGKIYEAIGQKSLMV 180
Cdd:COG2071   85 ELALIRAALERGKPVLGICRGMQLLNVALGGTLYQDL-PDQVPGALDHRQPAPRYAPRHTVEIEPGSRLARILGEEEIRV 163
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446725932 181 NSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRYVAAVQWHPEMMSEKDVLQQRLFNQFVNEISK 247
Cdd:COG2071  164 NSLHHQAVKRLGPGLRVSARAPDGVIEAIESPGAPFVLGVQWHPEWLAASDPLSRRLFEAFVEAARA 230
 
Name Accession Description Interval E-value
PuuD COG2071
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains ...
22-247 1.09e-100

Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains GATase1-like domain [Amino acid transport and metabolism];


Pssm-ID: 441674 [Multi-domain]  Cd Length: 231  Bit Score: 292.46  E-value: 1.09e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  22 LRGLPGQDMALFSYDYIRSLQRAGATVVLLPI-EGVDQIESTLNQLDGLLLAGGADINPIYYGDTPKSYIGTVEEERDNF 100
Cdd:COG2071    5 LRTAGGYPAHYLPEDYVRAVRAAGGLPVLLPPvGDEEDLDELLDRLDGLVLTGGADVDPALYGEEPHPELGPIDPERDAF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 101 ELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQDLeHEMGPEYFHVREQFRKWQGSHSVDLLEEGKIYEAIGQKSLMV 180
Cdd:COG2071   85 ELALIRAALERGKPVLGICRGMQLLNVALGGTLYQDL-PDQVPGALDHRQPAPRYAPRHTVEIEPGSRLARILGEEEIRV 163
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446725932 181 NSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRYVAAVQWHPEMMSEKDVLQQRLFNQFVNEISK 247
Cdd:COG2071  164 NSLHHQAVKRLGPGLRVSARAPDGVIEAIESPGAPFVLGVQWHPEWLAASDPLSRRLFEAFVEAARA 230
GATase1_2 cd01745
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
5-242 5.28e-73

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153216 [Multi-domain]  Cd Length: 189  Bit Score: 220.91  E-value: 5.28e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932   5 IGVTGYYvdhseigKEGLRGLPGQDMAlfSYDYIRSLQRAGATVVLLPI-EGVDQIESTLNQLDGLLLAGGADINPIYYG 83
Cdd:cd01745    1 IGITARL-------REEEGGYERRDYL--NQYYVDAVRKAGGLPVLLPPvDDEEDLEQYLELLDGLLLTGGGDVDPPLYG 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  84 DTPKSYIGTVEEERDNFELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQDlehemgpeyfhvreqfrkwqgshsvdl 163
Cdd:cd01745   72 EEPHPELGPIDPERDAFELALLRAALERGKPILGICRGMQLLNVALGGTLYQD--------------------------- 124
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446725932 164 leegkiyeaigqksLMVNSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRYVAAVQWHPEMMSEKDVLQQRLFNQFV 242
Cdd:cd01745  125 --------------IRVNSLHHQAIKRLADGLRVEARAPDGVIEAIESPDRPFVLGVQWHPEWLADTDPDSLKLFEAFV 189
Peptidase_C26 pfam07722
Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze ...
3-225 5.74e-73

Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C terminus.


Pssm-ID: 429620 [Multi-domain]  Cd Length: 219  Bit Score: 221.75  E-value: 5.74e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932    3 PLIGVTGYYvdhSEIGKEGLRGLPGQDMAlfsYDYIRSLQRAGATVVLLPIEG-VDQIESTLNQLDGLLLAGGADINPIY 81
Cdd:pfam07722   1 PVIGITANE---ESLGGHVFHGAGESYLA---AGYVEAVEGAGGLPVLLPILGdPEDAAAILDRLDGLLLTGGPNVDPHF 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932   82 YGDTPKSYIGTVEEERDNFELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQDLEHEMGPEYFHVREQFRKWQGSHSV 161
Cdd:pfam07722  75 YGEEPSESGGPYDPARDAYELALIRAALARGKPILGICRGFQLLNVALGGTLYQDIQEQPGFTDHREHCQVAPYAPSHAV 154
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446725932  162 DLLEEGKIYEAIGQKSLMVNSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRY-VAAVQWHPE 225
Cdd:pfam07722 155 NVEPGSLLASLLGSEEFRVNSLHHQAIDRLAPGLRVEAVAPDGTIEAIESPNAKGfALGVQWHPE 219
puuD PRK11366
gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional
2-242 4.54e-34

gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional


Pssm-ID: 183101 [Multi-domain]  Cd Length: 254  Bit Score: 123.09  E-value: 4.54e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932   2 KPLIGVTgyyvdhseIGKEGLRGLPGQDMalfSYDYIRSLQRAGATVVLLP--IEGVDQIESTLNQLDGLLLAGG-ADIN 78
Cdd:PRK11366   7 NPVIGVV--------MCRNRLKGHATQTL---QEKYLNAIIHAGGLPIALPhaLAEPSLLEQLLPKLDGIYLPGSpSNVQ 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  79 PIYYG---DTPKSYIGtveeeRDNFELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQDL-------EHEMGPEyFHV 148
Cdd:PRK11366  76 PHLYGengDEPDADPG-----RDLLSMALINAALERRIPIFAICRGLQELVVATGGSLHRKLceqpellEHREDPE-LPV 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 149 REQFRKwqgSHSVDLLEEGKIYEAI-GQKSLMVNSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRYVAAVQWHPEMM 227
Cdd:PRK11366 150 EQQYAP---SHEVQVEEGGLLSALLpECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWN 226
                        250
                 ....*....|....*
gi 446725932 228 SEKDVLQQRLFNQFV 242
Cdd:PRK11366 227 SSEYALSRILFEGFI 241
guaA_Nterm TIGR00888
GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; This protein of purine ...
68-248 4.13e-11

GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; This protein of purine de novo biosynthesis is well-conserved. However, it appears to split into two separate polypeptide chains in most of the Archaea. This N-terminal region would be the smaller subunit. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 129966 [Multi-domain]  Cd Length: 188  Bit Score: 60.41  E-value: 4.13e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932   68 GLLLAGGADInpIYYGDTPKsyigtveeerdnfelnLAKQALEKDIPILGICRGLQVLNVAAGGslyqDLEHEMGPEYfh 147
Cdd:TIGR00888  44 GIILSGGPSS--VYAENAPR----------------ADEKIFELGVPVLGICYGMQLMAKQLGG----EVGRAEKREY-- 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  148 vreqfrkwqGSHSVDLLEEGKIYEAIGQKSLMVNSfHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRyVAAVQWHPEMM 227
Cdd:TIGR00888 100 ---------GKAELEILDEDDLFRGLPDESTVWMS-HGDKVKELPEGFKVLATSDNCPVAAMAHEEKP-IYGVQFHPEVT 168
                         170       180
                  ....*....|....*....|..
gi 446725932  228 -SEKDvlqQRLFNQFVNEISKK 248
Cdd:TIGR00888 169 hTEYG---NELLENFVYDVCGC 187
 
Name Accession Description Interval E-value
PuuD COG2071
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains ...
22-247 1.09e-100

Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains GATase1-like domain [Amino acid transport and metabolism];


Pssm-ID: 441674 [Multi-domain]  Cd Length: 231  Bit Score: 292.46  E-value: 1.09e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  22 LRGLPGQDMALFSYDYIRSLQRAGATVVLLPI-EGVDQIESTLNQLDGLLLAGGADINPIYYGDTPKSYIGTVEEERDNF 100
Cdd:COG2071    5 LRTAGGYPAHYLPEDYVRAVRAAGGLPVLLPPvGDEEDLDELLDRLDGLVLTGGADVDPALYGEEPHPELGPIDPERDAF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 101 ELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQDLeHEMGPEYFHVREQFRKWQGSHSVDLLEEGKIYEAIGQKSLMV 180
Cdd:COG2071   85 ELALIRAALERGKPVLGICRGMQLLNVALGGTLYQDL-PDQVPGALDHRQPAPRYAPRHTVEIEPGSRLARILGEEEIRV 163
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446725932 181 NSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRYVAAVQWHPEMMSEKDVLQQRLFNQFVNEISK 247
Cdd:COG2071  164 NSLHHQAVKRLGPGLRVSARAPDGVIEAIESPGAPFVLGVQWHPEWLAASDPLSRRLFEAFVEAARA 230
GATase1_2 cd01745
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
5-242 5.28e-73

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153216 [Multi-domain]  Cd Length: 189  Bit Score: 220.91  E-value: 5.28e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932   5 IGVTGYYvdhseigKEGLRGLPGQDMAlfSYDYIRSLQRAGATVVLLPI-EGVDQIESTLNQLDGLLLAGGADINPIYYG 83
Cdd:cd01745    1 IGITARL-------REEEGGYERRDYL--NQYYVDAVRKAGGLPVLLPPvDDEEDLEQYLELLDGLLLTGGGDVDPPLYG 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  84 DTPKSYIGTVEEERDNFELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQDlehemgpeyfhvreqfrkwqgshsvdl 163
Cdd:cd01745   72 EEPHPELGPIDPERDAFELALLRAALERGKPILGICRGMQLLNVALGGTLYQD--------------------------- 124
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446725932 164 leegkiyeaigqksLMVNSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRYVAAVQWHPEMMSEKDVLQQRLFNQFV 242
Cdd:cd01745  125 --------------IRVNSLHHQAIKRLADGLRVEARAPDGVIEAIESPDRPFVLGVQWHPEWLADTDPDSLKLFEAFV 189
Peptidase_C26 pfam07722
Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze ...
3-225 5.74e-73

Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C terminus.


Pssm-ID: 429620 [Multi-domain]  Cd Length: 219  Bit Score: 221.75  E-value: 5.74e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932    3 PLIGVTGYYvdhSEIGKEGLRGLPGQDMAlfsYDYIRSLQRAGATVVLLPIEG-VDQIESTLNQLDGLLLAGGADINPIY 81
Cdd:pfam07722   1 PVIGITANE---ESLGGHVFHGAGESYLA---AGYVEAVEGAGGLPVLLPILGdPEDAAAILDRLDGLLLTGGPNVDPHF 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932   82 YGDTPKSYIGTVEEERDNFELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQDLEHEMGPEYFHVREQFRKWQGSHSV 161
Cdd:pfam07722  75 YGEEPSESGGPYDPARDAYELALIRAALARGKPILGICRGFQLLNVALGGTLYQDIQEQPGFTDHREHCQVAPYAPSHAV 154
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446725932  162 DLLEEGKIYEAIGQKSLMVNSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRY-VAAVQWHPE 225
Cdd:pfam07722 155 NVEPGSLLASLLGSEEFRVNSLHHQAIDRLAPGLRVEAVAPDGTIEAIESPNAKGfALGVQWHPE 219
puuD PRK11366
gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional
2-242 4.54e-34

gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional


Pssm-ID: 183101 [Multi-domain]  Cd Length: 254  Bit Score: 123.09  E-value: 4.54e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932   2 KPLIGVTgyyvdhseIGKEGLRGLPGQDMalfSYDYIRSLQRAGATVVLLP--IEGVDQIESTLNQLDGLLLAGG-ADIN 78
Cdd:PRK11366   7 NPVIGVV--------MCRNRLKGHATQTL---QEKYLNAIIHAGGLPIALPhaLAEPSLLEQLLPKLDGIYLPGSpSNVQ 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  79 PIYYG---DTPKSYIGtveeeRDNFELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQDL-------EHEMGPEyFHV 148
Cdd:PRK11366  76 PHLYGengDEPDADPG-----RDLLSMALINAALERRIPIFAICRGLQELVVATGGSLHRKLceqpellEHREDPE-LPV 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 149 REQFRKwqgSHSVDLLEEGKIYEAI-GQKSLMVNSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRYVAAVQWHPEMM 227
Cdd:PRK11366 150 EQQYAP---SHEVQVEEGGLLSALLpECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWN 226
                        250
                 ....*....|....*
gi 446725932 228 SEKDVLQQRLFNQFV 242
Cdd:PRK11366 227 SSEYALSRILFEGFI 241
GATase1_CPSase cd01744
Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; This ...
38-225 1.74e-14

Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; This group of sequences represents the small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. CPSase II catalyzes the production of carbomyl phosphate (CP) from bicarbonate, glutamine and two molecules of MgATP. The reaction is believed to proceed by a series of four biochemical reactions involving a minimum of three discrete highly reactive intermediates. The synthesis of CP is critical for the initiation of two separate biosynthetic pathways. In one CP is coupled to aspartate, its carbon and nitrogen nuclei ultimately incorporated into the aromatic moieties of pyrimidine nucleotides. In the second pathway CP is condensed with ornithine at the start of the urea cycle and is utilized for the detoxification of ammonia and biosynthesis of arginine. CPSases may be encoded by one or by several genes, depending on the species. The E.coli enzyme is a heterodimer consisting of two polypeptide chains referred to as the small and large subunit. Ammonia an intermediate during the biosynthesis of carbomyl phosphate produced by the hydrolysis of glutamine in the small subunit of the enzyme is delivered via a molecular tunnel between the remotely located carboxyphosphate active site in the large subunit. CPSase IIs belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. This group also contains the sequence from the mammalian urea cycle form which has lost the active site Cys, resulting in an ammonia-dependent form, CPSase I.


Pssm-ID: 153215 [Multi-domain]  Cd Length: 178  Bit Score: 69.45  E-value: 1.74e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  38 IRSLQRAGATVVLLP----IEGVDQIEStlnqlDGLLLAGGadinPiyyGDtPKSYIGTVEEerdnfelnlAKQALEKDI 113
Cdd:cd01744   13 LRELLKRGCEVTVVPyntdAEEILKLDP-----DGIFLSNG----P---GD-PALLDEAIKT---------VRKLLGKKI 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 114 PILGICRGLQVLNVAAGGSLYQdleheMgpEYFHvreqfrkwQGS-HSVDLLEEGKIYeaigqkslMVNSFHHQAV--KT 190
Cdd:cd01744   71 PIFGICLGHQLLALALGAKTYK-----M--KFGH--------RGSnHPVKDLITGRVY--------ITSQNHGYAVdpDS 127
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 446725932 191 LGKDFEASAWS-FDGVIEAIESKaHRYVAAVQWHPE 225
Cdd:cd01744  128 LPGGLEVTHVNlNDGTVEGIRHK-DLPVFSVQFHPE 162
GuaA1 COG0518
GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP ...
62-226 4.05e-14

GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP synthase, glutamine amidotransferase domain is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 440284 [Multi-domain]  Cd Length: 225  Bit Score: 69.20  E-value: 4.05e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  62 TLNQLDGLLLAGGadinpiyygdtPKSyigtVEEERDNF--ELNLAKQALEKDIPILGICRGLQVLNVAAGGSLYQdleH 139
Cdd:COG0518   45 DLEDPDGLILSGG-----------PMS----VYDEDPWLedEPALIREAFELGKPVLGICYGAQLLAHALGGKVEP---G 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 140 EmGPEYfhvreqfrkwqGSHSVDLLEEGKIYEAIGQKsLMVNSFHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRYvaA 219
Cdd:COG0518  107 P-GREI-----------GWAPVELTEADPLFAGLPDE-FTVWMSHGDTVTELPEGAEVLASSDNCPNQAFRYGRRVY--G 171

                 ....*..
gi 446725932 220 VQWHPEM 226
Cdd:COG0518  172 VQFHPEV 178
GATase pfam00117
Glutamine amidotransferase class-I;
33-243 8.84e-14

Glutamine amidotransferase class-I;


Pssm-ID: 395067 [Multi-domain]  Cd Length: 188  Bit Score: 67.65  E-value: 8.84e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932   33 FSYDYIRSLQRAGATVVLLPIEGVDQIESTLNqLDGLLLAGGadinPiyyGDtPKSYIGTVEeerdnfelnLAKQALEKD 112
Cdd:pfam00117   9 FTYNLARALRELGVEVTVVPNDTPAEEILEEN-PDGIILSGG----P---GS-PGAAGGAIE---------AIREARELK 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  113 IPILGICRGLQVLNVAAGGSLYqdlehEMGPEYFHvreqfrkwQGSHSVDLLEEGKIYeaiGQKSLMVNSFHHQ-AV--K 189
Cdd:pfam00117  71 IPILGICLGHQLLALAFGGKVV-----KAKKFGHH--------GKNSPVGDDGCGLFY---GLPNVFIVRRYHSyAVdpD 134
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 446725932  190 TLGKDFEASAWS-FDGVIEAIESKaHRYVAAVQWHPE-MMSEKDvlQQRLFNQFVN 243
Cdd:pfam00117 135 TLPDGLEVTATSeNDGTIMGIRHK-KLPIFGVQFHPEsILTPHG--PEILFNFFIK 187
PRK13566 PRK13566
anthranilate synthase component I;
106-225 3.48e-12

anthranilate synthase component I;


Pssm-ID: 237429 [Multi-domain]  Cd Length: 720  Bit Score: 65.71  E-value: 3.48e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 106 KQALEKDIPILGICRGLQVLNVAAGGSLYQdLEHEM-G-PEYFHVREQFRKWQGshsvdLLEEGKI--YEAIgqkslmvn 181
Cdd:PRK13566 592 DAALARNLPIFGVCLGLQAIVEAFGGELGQ-LAYPMhGkPSRIRVRGPGRLFSG-----LPEEFTVgrYHSL-------- 657
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 446725932 182 sfhHQAVKTLGKDFEASAWSFDGVIEAIESKAHRyVAAVQWHPE 225
Cdd:PRK13566 658 ---FADPETLPDELLVTAETEDGVIMAIEHKTLP-VAAVQFHPE 697
GATase1_1 cd01741
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
41-225 1.02e-11

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153212 [Multi-domain]  Cd Length: 188  Bit Score: 61.88  E-value: 1.02e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  41 LQRAGATVVllPIEGVD----QIESTLNQLDGLLLAGGADinpiyygdtpksyigTVEEERDNF---ELNLAKQALEKDI 113
Cdd:cd01741   20 LREAGAETI--EIDVVDvyagELLPDLDDYDGLVILGGPM---------------SVDEDDYPWlkkLKELIRQALAAGK 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 114 PILGICRGLQVLNVAAGGSLYQdleHEMGPEyfhvreqfrkwQGSHSVDLLEEGK--IYEAIGQKSLMVNSFHHQAVKTL 191
Cdd:cd01741   83 PVLGICLGHQLLARALGGKVGR---NPKGWE-----------IGWFPVTLTEAGKadPLFAGLPDEFPVFHWHGDTVVEL 148
                        170       180       190
                 ....*....|....*....|....*....|....
gi 446725932 192 GKDFEASAWSFDGVIEAIESKAHRYvaAVQWHPE 225
Cdd:cd01741  149 PPGAVLLASSEACPNQAFRYGDRAL--GLQFHPE 180
guaA_Nterm TIGR00888
GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; This protein of purine ...
68-248 4.13e-11

GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; This protein of purine de novo biosynthesis is well-conserved. However, it appears to split into two separate polypeptide chains in most of the Archaea. This N-terminal region would be the smaller subunit. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 129966 [Multi-domain]  Cd Length: 188  Bit Score: 60.41  E-value: 4.13e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932   68 GLLLAGGADInpIYYGDTPKsyigtveeerdnfelnLAKQALEKDIPILGICRGLQVLNVAAGGslyqDLEHEMGPEYfh 147
Cdd:TIGR00888  44 GIILSGGPSS--VYAENAPR----------------ADEKIFELGVPVLGICYGMQLMAKQLGG----EVGRAEKREY-- 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  148 vreqfrkwqGSHSVDLLEEGKIYEAIGQKSLMVNSfHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRyVAAVQWHPEMM 227
Cdd:TIGR00888 100 ---------GKAELEILDEDDLFRGLPDESTVWMS-HGDKVKELPEGFKVLATSDNCPVAAMAHEEKP-IYGVQFHPEVT 168
                         170       180
                  ....*....|....*....|..
gi 446725932  228 -SEKDvlqQRLFNQFVNEISKK 248
Cdd:TIGR00888 169 hTEYG---NELLENFVYDVCGC 187
GATase1_GMP_Synthase cd01742
Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase; Type 1 glutamine ...
60-225 8.98e-11

Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase; Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase. GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. Glutamine amidotransferase (GATase) activity catalyse the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. GMP synthetase catalyses the amination of the nucleotide precursor xanthosine 5'-monophosphate to form GMP. GMP synthetase belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.


Pssm-ID: 153213 [Multi-domain]  Cd Length: 181  Bit Score: 59.09  E-value: 8.98e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  60 ESTLNQLDGLLLAGGAdiNPIYYGDTPKSyigtveeERDNFELNlakqalekdIPILGICRGLQVLNVAAGGSlyqdLEH 139
Cdd:cd01742   36 EIKLKNPKGIILSGGP--SSVYEEDAPRV-------DPEIFELG---------VPVLGICYGMQLIAKALGGK----VER 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 140 EMGPEYfhvreqfrkwqGSHSVDLLEEGKIYEAIGQKSLMVNSfHHQAVKTLGKDFEASAWSFDGVIEAIESKAHRyVAA 219
Cdd:cd01742   94 GDKREY-----------GKAEIEIDDSSPLFEGLPDEQTVWMS-HGDEVVKLPEGFKVIASSDNCPVAAIANEEKK-IYG 160

                 ....*.
gi 446725932 220 VQWHPE 225
Cdd:cd01742  161 VQFHPE 166
PabA COG0512
Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) [Amino acid ...
107-225 1.47e-10

Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) [Amino acid transport and metabolism, Coenzyme transport and metabolism]; Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 440278 [Multi-domain]  Cd Length: 189  Bit Score: 58.51  E-value: 1.47e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 107 QALEKDIPILGICRGLQVLNVAAGGSLYQdlehemGPEYFHvreqfrkwqG-SHSVDLLEEGkIYEAIGQK-------SL 178
Cdd:COG0512   66 RAFAGKIPILGVCLGHQAIGEAFGGKVVR------APEPMH---------GkTSPITHDGSG-LFAGLPNPftatryhSL 129
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 446725932 179 MVNSfhhqavKTLGKDFEASAWSFDGVIEAIESKAHRyVAAVQWHPE 225
Cdd:COG0512  130 VVDR------ETLPDELEVTAWTEDGEIMGIRHRELP-IEGVQFHPE 169
PRK00758 PRK00758
GMP synthase subunit A; Validated
39-225 1.89e-10

GMP synthase subunit A; Validated


Pssm-ID: 179112 [Multi-domain]  Cd Length: 184  Bit Score: 58.32  E-value: 1.89e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  39 RSLQRAGATVVLLPIE-GVDQIEStlnQLDGLLLAGGADINPIyygdtpksyiGtveeerdnfelNLAKQALEKDIPILG 117
Cdd:PRK00758  17 RTLRYLGVDAKIIPNTtPVEEIKA---FEDGLILSGGPDIERA----------G-----------NCPEYLKELDVPILG 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 118 ICRGLQVLNVAAGGSLyQDLEHemgPEYFHVReqfrkwqgshsVDLLEEGKIYEAIGQKsLMVNSFHHQAVKTLGKDFEA 197
Cdd:PRK00758  73 ICLGHQLIAKAFGGEV-GRGEY---GEYALVE-----------VEILDEDDILKGLPPE-IRVWASHADEVKELPDGFEI 136
                        170       180
                 ....*....|....*....|....*...
gi 446725932 198 SAWSFDGVIEAIESKaHRYVAAVQWHPE 225
Cdd:PRK00758 137 LARSDICEVEAMKHK-EKPIYGVQFHPE 163
GATase1_Anthranilate_Synthase cd01743
Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Type 1 ...
107-225 2.06e-10

Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase (ASase). This group contains proteins similar to para-aminobenzoate (PABA) synthase and ASase. These enzymes catalyze similar reactions and produce similar products, PABA and ortho-aminobenzoate (anthranilate). Each enzyme is composed of non-identical subunits: a glutamine amidotransferase subunit (component II) and a subunit that produces an aminobenzoate products (component I). ASase catalyses the synthesis of anthranilate from chorismate and glutamine and is a tetrameric protein comprising two copies each of components I and II. Component II of ASase belongs to the family of triad GTases which hydrolyze glutamine and transfer nascent ammonia between the active sites. In some bacteria, such as Escherichia coli, component II can be much larger than in other organisms, due to the presence of phosphoribosyl-anthranilate transferase (PRTase) activity. PRTase catalyses the second step in tryptophan biosynthesis and results in the addition of 5-phosphoribosyl-1-pyrophosphate to anthranilate to create N-5'-phosphoribosyl-anthranilate. In E.coli, the first step in the conversion of chorismate to PABA involves two proteins: PabA and PabB which co-operate to transfer the amide nitrogen of glutamine to chorismate forming 4-amino-4 deoxychorismate (ADC). PabA acts as a glutamine amidotransferase, supplying an amino group to PabB, which carries out the amination reaction. A third protein PabC then mediates elimination of pyruvate and aromatization to give PABA. Several organisms have bipartite proteins containing fused domains homologous to PabA and PabB commonly called PABA synthases. These hybrid PABA synthases may produce ADC and not PABA.


Pssm-ID: 153214 [Multi-domain]  Cd Length: 184  Bit Score: 58.31  E-value: 2.06e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 107 QALEKDIPILGICRGLQVLNVAAGGSLYQdlehemGPEYFHvreqfrkwqGSHSVDLLEEGKIYEAIGQK-------SLM 179
Cdd:cd01743   66 RALAGKVPILGVCLGHQAIAEAFGGKVVR------APEPMH---------GKTSEIHHDGSGLFKGLPQPftvgryhSLV 130
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 446725932 180 VNSfhhqavKTLGKDFEASAWSFDGVIEAIEskaHRY--VAAVQWHPE 225
Cdd:cd01743  131 VDP------DPLPDLLEVTASTEDGVIMALR---HRDlpIYGVQFHPE 169
GATase1 cd01653
Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase ...
35-131 4.78e-10

Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153210 [Multi-domain]  Cd Length: 115  Bit Score: 55.68  E-value: 4.78e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  35 YDYIRSLQRAGATVVLLPI-EGVDQIESTLNQLDGLLLAGGADinpiyygdtpksyiGTVEEERDNFELNLAKQALEKDI 113
Cdd:cd01653   15 ASPLDALREAGAEVDVVSPdGGPVESDVDLDDYDGLILPGGPG--------------TPDDLARDEALLALLREAAAAGK 80
                         90
                 ....*....|....*...
gi 446725932 114 PILGICRGLQVLNVAAGG 131
Cdd:cd01653   81 PILGICLGAQLLVLGVQF 98
GAT_1 cd03128
Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase ...
35-125 5.77e-09

Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase (CPSase), cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad of typical GATase1 domains, by having a Ser in place of the reactive Cys at the nucleophile elbow. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Peptidase E has a circular permutation in the common core of a typical GTAse1 domain.


Pssm-ID: 153222 [Multi-domain]  Cd Length: 92  Bit Score: 52.20  E-value: 5.77e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  35 YDYIRSLQRAGATVVLLPI-EGVDQIESTLNQLDGLLLAGGADinpiyygdtpksyiGTVEEERDNFELNLAKQALEKDI 113
Cdd:cd03128   15 ASPLDALREAGAEVDVVSPdGGPVESDVDLDDYDGLILPGGPG--------------TPDDLAWDEALLALLREAAAAGK 80
                         90
                 ....*....|..
gi 446725932 114 PILGICRGLQVL 125
Cdd:cd03128   81 PVLGICLGAQLL 92
PRK12564 PRK12564
carbamoyl-phosphate synthase small subunit;
35-225 8.28e-09

carbamoyl-phosphate synthase small subunit;


Pssm-ID: 237139 [Multi-domain]  Cd Length: 360  Bit Score: 55.08  E-value: 8.28e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  35 YDY------IRSLQRAGATVVLLP----IEGVDQIEStlnqlDGLLLAGGadinPiyyGDtPKSYIGTVEeerdnfelnL 104
Cdd:PRK12564 183 IDFgvkrniLRELAERGCRVTVVPatttAEEILALNP-----DGVFLSNG----P---GD-PAALDYAIE---------M 240
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 105 AKQALEKDIPILGICRGLQVLNVAAGGSLYQdLEHEmgpeyfHvReqfrkwqGS-HSVDLLEEGKIYeaI-GQkslmvNs 182
Cdd:PRK12564 241 IRELLEKKIPIFGICLGHQLLALALGAKTYK-MKFG------H-R-------GAnHPVKDLETGKVE--ItSQ-----N- 297
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 446725932 183 fHHQAV--KTLGKDFEASAWS-FDGVIEAIEskaHRYVAA--VQWHPE 225
Cdd:PRK12564 298 -HGFAVdeDSLPANLEVTHVNlNDGTVEGLR---HKDLPAfsVQYHPE 341
PRK14607 PRK14607
bifunctional anthranilate synthase component II/anthranilate phosphoribosyltransferase;
107-243 9.87e-09

bifunctional anthranilate synthase component II/anthranilate phosphoribosyltransferase;


Pssm-ID: 237764 [Multi-domain]  Cd Length: 534  Bit Score: 55.11  E-value: 9.87e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 107 QALEKDIPILGICRGLQVLNVAAGGSLYQdlehemGPEYFHVREQFRKWQGShsvdlleegKIYEAIGQKSLMVNsFHHQ 186
Cdd:PRK14607  68 RHFSGKVPILGVCLGHQAIGYAFGGKIVH------AKRILHGKTSPIDHNGK---------GLFRGIPNPTVATR-YHSL 131
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446725932 187 AVK--TLGKDFEASAWSFDGVIEAIESKAHrYVAAVQWHPEMMSEKDvlQQRLFNQFVN 243
Cdd:PRK14607 132 VVEeaSLPECLEVTAKSDDGEIMGIRHKEH-PIFGVQFHPESILTEE--GKRILKNFLN 187
GATase1_CTP_Synthase cd01746
Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase; ...
57-225 3.38e-08

Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase; Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase (CTP). CTP is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. CTPs produce CTP from UTP and glutamine and regulate intracellular CTP levels through interactions with four ribonucleotide triphosphates. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. CTP is derived form UTP in three separate steps involving two active sites. In one active site, the UTP O4 oxygen is activated by Mg-ATP-dependent phosphorylation, followed by displacement of the resulting 4-phosphate moiety by ammonia. At a separate site, ammonia is generated via rate limiting glutamine hydrolysis (glutaminase) activity. A gated channel that spans between the glutamine hydrolysis and amidoligase active sites provides a path for ammonia diffusion. CTPs belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.


Pssm-ID: 153217 [Multi-domain]  Cd Length: 235  Bit Score: 52.56  E-value: 3.38e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  57 DQIESTLNQLDGLLLAGGADInpiyygdtpksyigtveeeRdNFE--LNLAKQALEKDIPILGICRGLQVL------NVA 128
Cdd:cd01746   47 ENAEEALKGADGILVPGGFGI-------------------R-GVEgkILAIKYARENNIPFLGICLGMQLAviefarNVL 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 129 aggslyqDLEH----EMGPEYFHV-----REQFRKWQ-------GSHSVDLlEEGKIYEAIGQKSLMVNSFHH------Q 186
Cdd:cd01746  107 -------GLPDanstEFDPDTPHPvvdlmPEQKGVKDlggtmrlGAYPVIL-KPGTLAHKYYGKDEVEERHRHryevnpE 178
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 446725932 187 AVKTL-GKDFEASAWSFDGV-IEAIESKAHRYVAAVQWHPE 225
Cdd:cd01746  179 YVDELeEAGLRFSGTDPDGGlVEIVELPDHPFFVGTQFHPE 219
CarA COG0505
Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism, Nucleotide ...
35-225 6.59e-08

Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism, Nucleotide transport and metabolism]; Carbamoylphosphate synthase small subunit is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 440271 [Multi-domain]  Cd Length: 361  Bit Score: 52.33  E-value: 6.59e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  35 YDY------IRSLQRAGATVVLLPIE-GVDQIEStLNQlDGLLLAGGadinPiyyGDtPKSYIGTVEeerdnfelnLAKQ 107
Cdd:COG0505  182 LDFgvkrniLRELAERGCRVTVVPATtSAEEILA-LNP-DGVFLSNG----P---GD-PAALDYAIE---------TIRE 242
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 108 ALEKDIPILGICRGLQVLNVAAGGSLYQdLEHEmgpeyfHvReqfrkwqGS-HSVDLLEEGKIYeaI-GQkslmvNsfHH 185
Cdd:COG0505  243 LLGKGIPIFGICLGHQLLALALGAKTYK-LKFG------H-R-------GAnHPVKDLETGRVE--ItSQ-----N--HG 298
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 446725932 186 QAV--KTL-GKDFEASAWS-FDGVIEAIESKAHRyVAAVQWHPE 225
Cdd:COG0505  299 FAVdeDSLpATDLEVTHVNlNDGTVEGLRHKDLP-AFSVQYHPE 341
PRK12838 PRK12838
carbamoyl phosphate synthase small subunit; Reviewed
38-225 1.51e-07

carbamoyl phosphate synthase small subunit; Reviewed


Pssm-ID: 183784 [Multi-domain]  Cd Length: 354  Bit Score: 51.43  E-value: 1.51e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  38 IRSLQRAGATVVLLP----IEGVDQIEStlnqlDGLLLAGGadinPiyyGDtPKSYIGTVEEERDNFElnlakqalekDI 113
Cdd:PRK12838 182 LRSLSKRGCKVTVLPydtsLEEIKNLNP-----DGIVLSNG----P---GD-PKELQPYLPEIKKLIS----------SY 238
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 114 PILGICRGLQVLNVAAGGSLYQdleheMGPEYfhvreqfrkwQGS-HSVDLLEEGKIYeaigqkslMVNSFHHQAVKTLG 192
Cdd:PRK12838 239 PILGICLGHQLIALALGADTEK-----LPFGH----------RGAnHPVIDLTTGRVW--------MTSQNHGYVVDEDS 295
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 446725932 193 -KDFEASAWSF---DGVIEAIESKaHRYVAAVQWHPE 225
Cdd:PRK12838 296 lDGTPLSVRFFnvnDGSIEGLRHK-KKPVLSVQFHPE 331
guaA PRK00074
GMP synthase; Reviewed
109-245 3.07e-07

GMP synthase; Reviewed


Pssm-ID: 234614 [Multi-domain]  Cd Length: 511  Bit Score: 50.82  E-value: 3.07e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 109 LEKDIPILGICRGLQVLNVAAGGSlyqdLEHEMGPEYfhvreqfrkwqGSHSVDLLEEGKIYEAIGQKSLMVNSfHHQAV 188
Cdd:PRK00074  72 FELGVPVLGICYGMQLMAHQLGGK----VERAGKREY-----------GRAELEVDNDSPLFKGLPEEQDVWMS-HGDKV 135
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446725932 189 KTLGKDFEASAWSFDGVIEAIESKAHRYvAAVQWHPEMM-SEKDvlqQRLFNQFVNEI 245
Cdd:PRK00074 136 TELPEGFKVIASTENCPIAAIANEERKF-YGVQFHPEVThTPQG---KKLLENFVFDI 189
PLN02347 PLN02347
GMP synthetase
110-239 8.55e-07

GMP synthetase


Pssm-ID: 215197 [Multi-domain]  Cd Length: 536  Bit Score: 49.30  E-value: 8.55e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 110 EKDIPILGICRGLQVLNVAAGGSLYQDLEHEMGpeyfhvREQFRKWQGSHSVDLLEEGkiyeaigqKSLMVNSFHHQAVK 189
Cdd:PLN02347  84 ERGVPVLGICYGMQLIVQKLGGEVKPGEKQEYG------RMEIRVVCGSQLFGDLPSG--------ETQTVWMSHGDEAV 149
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446725932 190 TLGKDFEASAWSFDGVIEAIESKAHRyVAAVQWHPEMM-SEK--DVLQQRLFN 239
Cdd:PLN02347 150 KLPEGFEVVAKSVQGAVVAIENRERR-IYGLQYHPEVThSPKgmETLRHFLFD 201
trpG CHL00101
anthranilate synthase component 2
113-243 6.09e-06

anthranilate synthase component 2


Pssm-ID: 214365 [Multi-domain]  Cd Length: 190  Bit Score: 45.49  E-value: 6.09e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 113 IPILGICRGLQVLNVAAGGSLYQ--DLEHEMGPEYFHVREQFrkWQGSHSVdlleegkiYEAIGQKSLMVNSfhhqavKT 190
Cdd:CHL00101  73 IPILGVCLGHQSIGYLFGGKIIKapKPMHGKTSKIYHNHDDL--FQGLPNP--------FTATRYHSLIIDP------LN 136
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446725932 191 LGKDFEASAWSFDGVIEAIESKAHRYVAAVQWHPEMMSEkdVLQQRLFNQFVN 243
Cdd:CHL00101 137 LPSPLEITAWTEDGLIMACRHKKYKMLRGIQFHPESLLT--THGQQILRNFLS 187
PurL2 COG0047
Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain ...
35-125 7.62e-06

Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439817 [Multi-domain]  Cd Length: 236  Bit Score: 45.82  E-value: 7.62e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  35 YDYIRSLQRAGATVVLLPIEgvdQIESTLNQLDGLLLAGGADinpiyYGDTP-------KSYIgtveeeRDNFelnlaKQ 107
Cdd:COG0047   15 RDMAAAFERAGAEAEDVWHS---DLRTDLDDFDGLVLPGGFS-----YGDYLragaiaaFSPI------MDAV-----RE 75
                         90
                 ....*....|....*...
gi 446725932 108 ALEKDIPILGICRGLQVL 125
Cdd:COG0047   76 FARRGGLVLGICNGFQIL 93
PRK07649 PRK07649
aminodeoxychorismate/anthranilate synthase component II;
113-250 1.47e-05

aminodeoxychorismate/anthranilate synthase component II;


Pssm-ID: 181066 [Multi-domain]  Cd Length: 195  Bit Score: 44.41  E-value: 1.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 113 IPILGICRGLQVLNVAAGGslyqdlehemgpeyfHVREQFRKWQGSHSvDLLEEGK-IYEAIgQKSLMVNSFHHQAVK-- 189
Cdd:PRK07649  73 IPIFGVCLGHQSIAQVFGG---------------EVVRAERLMHGKTS-LMHHDGKtIFSDI-PNPFTATRYHSLIVKke 135
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446725932 190 TLGKDFEASAWSFDGVIEAIESKAHRyVAAVQWHPE--MMSEKdvlqQRLFNQFVNEISKKVV 250
Cdd:PRK07649 136 TLPDCLEVTSWTEEGEIMAIRHKTLP-IEGVQFHPEsiMTSHG----KELLQNFIRKYSPSVT 193
PLN02335 PLN02335
anthranilate synthase
109-225 6.93e-05

anthranilate synthase


Pssm-ID: 177969 [Multi-domain]  Cd Length: 222  Bit Score: 42.86  E-value: 6.93e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932 109 LEKDIPILGICRGLQVLNVAAGGSLYQD---LEHEMGPEYFHVREqfrkwqgshsvdlLEEGKI------YEAIGQKSLM 179
Cdd:PLN02335  88 LGPLVPLFGVCMGLQCIGEAFGGKIVRSpfgVMHGKSSPVHYDEK-------------GEEGLFsglpnpFTAGRYHSLV 154
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 446725932 180 V--NSFHHQAVktlgkdfEASAWSFDGVIEAIESKAHRYVAAVQWHPE 225
Cdd:PLN02335 155 IekDTFPSDEL-------EVTAWTEDGLIMAARHRKYKHIQGVQFHPE 195
carA CHL00197
carbamoyl-phosphate synthase arginine-specific small subunit; Provisional
35-135 1.04e-04

carbamoyl-phosphate synthase arginine-specific small subunit; Provisional


Pssm-ID: 214392 [Multi-domain]  Cd Length: 382  Bit Score: 42.86  E-value: 1.04e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  35 YDYIRSLQRAGATVVLLPIEG-VDQIESTlnQLDGLLLAGG-ADINPIYYGdtpksyIGTVeeerdnfelnlaKQALEKD 112
Cdd:CHL00197 204 YNILRRLKSFGCSITVVPATSpYQDILSY--QPDGILLSNGpGDPSAIHYG------IKTV------------KKLLKYN 263
                         90       100
                 ....*....|....*....|...
gi 446725932 113 IPILGICRGLQVLNVAAGGSLYQ 135
Cdd:CHL00197 264 IPIFGICMGHQILSLALEAKTFK 286
YajL COG0693
Protein/nucleotide deglycase, PfpI/YajL/DJ-1 family (repair of methylglyoxal-glycated proteins ...
41-130 4.90e-04

Protein/nucleotide deglycase, PfpI/YajL/DJ-1 family (repair of methylglyoxal-glycated proteins and nucleic acids) [Defense mechanisms];


Pssm-ID: 440457 [Multi-domain]  Cd Length: 170  Bit Score: 39.70  E-value: 4.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  41 LQRAGATVVLLPIEGVDQIEST---------------LNQLDGLLLAGGaDINPIYYGDTPKSyigtveeerdnfeLNLA 105
Cdd:COG0693   25 LREAGAEVDVASPEGGPPVTSKhgitvtadktlddvdPDDYDALVLPGG-HGAPDDLREDPDV-------------VALV 90
                         90       100
                 ....*....|....*....|....*
gi 446725932 106 KQALEKDIPILGICRGLQVLnVAAG 130
Cdd:COG0693   91 REFYEAGKPVAAICHGPAVL-AAAG 114
GATase1_FGAR_AT cd01740
Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ...
35-155 6.02e-04

Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase; Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT). FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. FGAR-AT is a glutamine amidotransferase. Glutamine amidotransferase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. FGAR-AT belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site


Pssm-ID: 153211 [Multi-domain]  Cd Length: 238  Bit Score: 39.91  E-value: 6.02e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446725932  35 YDYIRSLQRAGATVVLLPIEGVDQIESTLNQLDGLLLAGGadinpIYYGDTPKSYIG-----TVEEErdnfelnlAKQAL 109
Cdd:cd01740   13 RDMAYAFELAGFEAEDVWHNDLLAGRKDLDDYDGVVLPGG-----FSYGDYLRAGAIaaaspLLMEE--------VKEFA 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 446725932 110 EKDIPILGICRGLQVLNVAagGSLYQDLEHEMGPEYFHvREQFRKW 155
Cdd:cd01740   80 ERGGLVLGICNGFQILVEL--GLLPGALIRNKGLKFIC-RWQNRFV 122
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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