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Conserved domains on  [gi|446758093|ref|WP_000835349|]
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MULTISPECIES: EexN family lipoprotein [Enterobacterales]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Eex_IncN NF033894
EexN family lipoprotein; Members of this family are lipoproteins, typically associated with ...
 4-64 7.73e-19

EexN family lipoprotein; Members of this family are lipoproteins, typically associated with mobile elements such as phage, and related to the entry exclusion protein Eex of IncN-type plasmids. Members of this family tend to be small (shorter than 90 amino acids) with three invariant Cys residues, one of which belongs to the lipoprotein signal peptide. This family shares some similarities with TIGR04359, which includes the entry exclusion lipoprotein TrbK of IncPalpha-type plasmids.


:

Pssm-ID: 468229  Cd Length: 65  Bit Score: 72.34  E-value: 7.73e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446758093  4 IATAGLVIISVFSLSGCIEETKSVDWWLAHPKETYKKFEECQKSG---SDSDNCKNVKRAHLSF 64
Cdd:NF033894  2 IILTLLLLCTGLLLAGCSEKTYSVDWYKAHPDELKEVLAKCKKNPgelADSPNCRNAREADFKL 65
 
Name Accession Description Interval E-value
Eex_IncN NF033894
EexN family lipoprotein; Members of this family are lipoproteins, typically associated with ...
 4-64 7.73e-19

EexN family lipoprotein; Members of this family are lipoproteins, typically associated with mobile elements such as phage, and related to the entry exclusion protein Eex of IncN-type plasmids. Members of this family tend to be small (shorter than 90 amino acids) with three invariant Cys residues, one of which belongs to the lipoprotein signal peptide. This family shares some similarities with TIGR04359, which includes the entry exclusion lipoprotein TrbK of IncPalpha-type plasmids.


Pssm-ID: 468229  Cd Length: 65  Bit Score: 72.34  E-value: 7.73e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446758093  4 IATAGLVIISVFSLSGCIEETKSVDWWLAHPKETYKKFEECQKSG---SDSDNCKNVKRAHLSF 64
Cdd:NF033894  2 IILTLLLLCTGLLLAGCSEKTYSVDWYKAHPDELKEVLAKCKKNPgelADSPNCRNAREADFKL 65
 
Name Accession Description Interval E-value
Eex_IncN NF033894
EexN family lipoprotein; Members of this family are lipoproteins, typically associated with ...
 4-64 7.73e-19

EexN family lipoprotein; Members of this family are lipoproteins, typically associated with mobile elements such as phage, and related to the entry exclusion protein Eex of IncN-type plasmids. Members of this family tend to be small (shorter than 90 amino acids) with three invariant Cys residues, one of which belongs to the lipoprotein signal peptide. This family shares some similarities with TIGR04359, which includes the entry exclusion lipoprotein TrbK of IncPalpha-type plasmids.


Pssm-ID: 468229  Cd Length: 65  Bit Score: 72.34  E-value: 7.73e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446758093  4 IATAGLVIISVFSLSGCIEETKSVDWWLAHPKETYKKFEECQKSG---SDSDNCKNVKRAHLSF 64
Cdd:NF033894  2 IILTLLLLCTGLLLAGCSEKTYSVDWYKAHPDELKEVLAKCKKNPgelADSPNCRNAREADFKL 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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