glycoside hydrolase family 99-like domain-containing protein is typically found within O-antigen biosynthesis clusters and bears resemblance to the GH71/GH99 family of alpha-1,2-mannosidases
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this ...
1-336
5.04e-178
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.
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Pssm-ID: 211420 [Multi-domain] Cd Length: 347 Bit Score: 496.67 E-value: 5.04e-178
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this ...
1-336
5.04e-178
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.
Pssm-ID: 211420 [Multi-domain] Cd Length: 347 Bit Score: 496.67 E-value: 5.04e-178
Glycosyltransferase WbsX; Members of this family are found in within O-antigen biosynthesis ...
4-332
1.96e-167
Glycosyltransferase WbsX; Members of this family are found in within O-antigen biosynthesis clusters in Gram negative bacteria, where they are predicted to function as glycosyltransferases.
Pssm-ID: 464132 [Multi-domain] Cd Length: 311 Bit Score: 468.52 E-value: 1.96e-167
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this ...
1-336
5.04e-178
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.
Pssm-ID: 211420 [Multi-domain] Cd Length: 347 Bit Score: 496.67 E-value: 5.04e-178
Glycosyltransferase WbsX; Members of this family are found in within O-antigen biosynthesis ...
4-332
1.96e-167
Glycosyltransferase WbsX; Members of this family are found in within O-antigen biosynthesis clusters in Gram negative bacteria, where they are predicted to function as glycosyltransferases.
Pssm-ID: 464132 [Multi-domain] Cd Length: 311 Bit Score: 468.52 E-value: 1.96e-167
Glycoside hydrolase families 71, 99, and related domains; This superfamily of glycoside ...
38-326
1.30e-20
Glycoside hydrolase families 71, 99, and related domains; This superfamily of glycoside hydrolases contains families GH71 and GH99 (following the CAZY nomenclature), as well as other members with undefined function and specificity.
Pssm-ID: 211414 Cd Length: 284 Bit Score: 89.86 E-value: 1.30e-20
Uncharacterized glycoside hydrolase family 99-like domain; This family of putative glycoside ...
286-335
1.04e-04
Uncharacterized glycoside hydrolase family 99-like domain; This family of putative glycoside hydrolases resembles glycosyl hydrolase families 71 and 99 (following the CAZY nomenclature) and may share a similar catalytic site and mechanism.
Pssm-ID: 211419 Cd Length: 313 Bit Score: 43.55 E-value: 1.04e-04
Uncharacterized glycoside hydrolase family 99-like domain; This family of putative glycoside ...
302-334
1.87e-04
Uncharacterized glycoside hydrolase family 99-like domain; This family of putative glycoside hydrolases resembles glycosyl hydrolase families 71 and 99 (following the CAZY nomenclature) and may share a similar catalytic site and mechanism.
Pssm-ID: 211416 Cd Length: 376 Bit Score: 42.71 E-value: 1.87e-04
Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
References:
Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
of the residues that compose this conserved feature have been mapped to the query sequence.
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Functional characterization of the conserved domain architecture found on the query.
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if a domain or superfamily has been annotated with functional sites (conserved features),
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click on the bars or triangles to view your query sequence embedded in a multiple sequence alignment of the proteins used to develop the corresponding domain model.
The table lists conserved domains identified on the query sequence. Click on the plus sign (+) on the left to display full descriptions, alignments, and scores.
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(labeled illustration) Standard Display shows only the best scoring domain model from each source, in each hit category listed below for each region on the query sequence.
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specific hits meet or exceed a domain-specific e-value threshold
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