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Conserved domains on  [gi|446781954|ref|WP_000859210|]
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MULTISPECIES: DUF3796 domain-containing protein [Bacillus]

Protein Classification

DUF3796 domain-containing protein( domain architecture ID 10577293)

DUF3796 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3796 pfam12676
Protein of unknown function (DUF3796); This family of proteins is functionally uncharacterized. ...
 40-107 1.37e-18

Protein of unknown function (DUF3796); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.


:

Pssm-ID: 403772  Cd Length: 112  Bit Score: 74.75  E-value: 1.37e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446781954   40 RTVQHDELFEQIVNKSCRNAFIVTLLTTAIIIFIEMLFPNSTLQEIDIALIFGTLILTFGFSMFFYDK 107
Cdd:pfam12676  45 NTVKADERFEQDVKRAAAFAFLVAILEMAIAVLISMIAGNPELSCVLVAILYAGLILTYGIKLFILEL 112
 
Name Accession Description Interval E-value
DUF3796 pfam12676
Protein of unknown function (DUF3796); This family of proteins is functionally uncharacterized. ...
 40-107 1.37e-18

Protein of unknown function (DUF3796); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.


Pssm-ID: 403772  Cd Length: 112  Bit Score: 74.75  E-value: 1.37e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446781954   40 RTVQHDELFEQIVNKSCRNAFIVTLLTTAIIIFIEMLFPNSTLQEIDIALIFGTLILTFGFSMFFYDK 107
Cdd:pfam12676  45 NTVKADERFEQDVKRAAAFAFLVAILEMAIAVLISMIAGNPELSCVLVAILYAGLILTYGIKLFILEL 112
PRK13024 PRK13024
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
 46-104 1.07e-03

bifunctional preprotein translocase subunit SecD/SecF; Reviewed


Pssm-ID: 237276 [Multi-domain]  Cd Length: 755  Bit Score: 37.13  E-value: 1.07e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446781954  46 ELFEQIVNKSCRNAF---IVTLLTTAIIIFIEMLFPNSTLQEIDIALIFGTLILTFGfSMFF 104
Cdd:PRK13024 664 KDLREIVNKSINQTLsrtINTSLTTLLVLLALLIFGGSSLRNFSLALLVGLIVGTYS-SIFI 724
 
Name Accession Description Interval E-value
DUF3796 pfam12676
Protein of unknown function (DUF3796); This family of proteins is functionally uncharacterized. ...
 40-107 1.37e-18

Protein of unknown function (DUF3796); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.


Pssm-ID: 403772  Cd Length: 112  Bit Score: 74.75  E-value: 1.37e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446781954   40 RTVQHDELFEQIVNKSCRNAFIVTLLTTAIIIFIEMLFPNSTLQEIDIALIFGTLILTFGFSMFFYDK 107
Cdd:pfam12676  45 NTVKADERFEQDVKRAAAFAFLVAILEMAIAVLISMIAGNPELSCVLVAILYAGLILTYGIKLFILEL 112
PRK13024 PRK13024
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
 46-104 1.07e-03

bifunctional preprotein translocase subunit SecD/SecF; Reviewed


Pssm-ID: 237276 [Multi-domain]  Cd Length: 755  Bit Score: 37.13  E-value: 1.07e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446781954  46 ELFEQIVNKSCRNAF---IVTLLTTAIIIFIEMLFPNSTLQEIDIALIFGTLILTFGfSMFF 104
Cdd:PRK13024 664 KDLREIVNKSINQTLsrtINTSLTTLLVLLALLIFGGSSLRNFSLALLVGLIVGTYS-SIFI 724
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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