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Conserved domains on  [gi|446805001|ref|WP_000882257|]
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MULTISPECIES: fimbrial chaperone [Salmonella]

Protein Classification

fimbria/pilus periplasmic chaperone( domain architecture ID 11484525)

fimbria/pilus periplasmic chaperone, similar to Haemophilus sp. GhfB protein which is thought to confer upon the strain the ability to survive in the genital tract

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-246 5.64e-162

fimbrial chaperone;


:

Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 448.01  E-value: 5.64e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   1 MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  81 PPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEnSAAQNTLQLAFRTRIKLFYRPQGLGDLAGEAP 160
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDAEK-VANQSLLQLAFRTRIKLFYRPDGLKGNPSEAP 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 161 AKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTAT-TISSGKINYSFINDFGGI 239
Cdd:PRK09926 160 LALKWSWAGSEGKASLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSgKASSGKVHFYAINDFGGA 239


                 ....*..
gi 446805001 240 INATASL 246
Cdd:PRK09926 240 IEGNASL 246
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-246 5.64e-162

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 448.01  E-value: 5.64e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   1 MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  81 PPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEnSAAQNTLQLAFRTRIKLFYRPQGLGDLAGEAP 160
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDAEK-VANQSLLQLAFRTRIKLFYRPDGLKGNPSEAP 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 161 AKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTAT-TISSGKINYSFINDFGGI 239
Cdd:PRK09926 160 LALKWSWAGSEGKASLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSgKASSGKVHFYAINDFGGA 239


                 ....*..
gi 446805001 240 INATASL 246
Cdd:PRK09926 240 IEGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-246 3.92e-85

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 253.37  E-value: 3.92e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   8 AFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRID 87
Cdd:COG3121    6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  88 PKKGQTIKIMYTGSQtLPSDRESVFWFNVLEVPPKANKNENsaaQNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKLTWRM 167
Cdd:COG3121   86 PGKSQTVRIIRTGPP-LPQDRESLFRLNVDEIPPKDASEEG---KNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 168 KHEQgksvVTVNNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTISSG-KINYSFINDFGGIINATASL 246
Cdd:COG3121  162 VGNG----LTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGgKVTWATINDYGGAVPLEATL 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 27-153 2.50e-56

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 175.85  E-value: 2.50e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   27 IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKImYTGSQTLPS 106
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI-YTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 446805001  107 DRESVFWFNVLEVPPKANKNENsaaQNTLQLAFRTRIKLFYRPQGLG 153
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGG---QNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-246 5.64e-162

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 448.01  E-value: 5.64e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   1 MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  81 PPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEnSAAQNTLQLAFRTRIKLFYRPQGLGDLAGEAP 160
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDAEK-VANQSLLQLAFRTRIKLFYRPDGLKGNPSEAP 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 161 AKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTAT-TISSGKINYSFINDFGGI 239
Cdd:PRK09926 160 LALKWSWAGSEGKASLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSgKASSGKVHFYAINDFGGA 239


                 ....*..
gi 446805001 240 INATASL 246
Cdd:PRK09926 240 IEGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-246 3.92e-85

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 253.37  E-value: 3.92e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   8 AFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRID 87
Cdd:COG3121    6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  88 PKKGQTIKIMYTGSQtLPSDRESVFWFNVLEVPPKANKNENsaaQNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKLTWRM 167
Cdd:COG3121   86 PGKSQTVRIIRTGPP-LPQDRESLFRLNVDEIPPKDASEEG---KNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 168 KHEQgksvVTVNNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTISSG-KINYSFINDFGGIINATASL 246
Cdd:COG3121  162 VGNG----LTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGgKVTWATINDYGGAVPLEATL 237
PRK15249 PRK15249
fimbrial chaperone;
11-240 1.00e-61

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 194.25  E-value: 1.00e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  11 VITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEP-GAIKVPFNATPPVSRIDPK 89
Cdd:PRK15249  14 IVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPeNSSAMPFIATPPVFRIQPK 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  90 KGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSaaQNTLQLAFRTRIKLFYRPQGLGDlAGEAPAKLTWRMKH 169
Cdd:PRK15249  94 AGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSG--QNKMLVMLRSRIKLFYRPDGLGK-PDNLAKKLQIKTVN 170

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446805001 170 E-QGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTL--KTATTISSGKINYSFINDFGGII 240
Cdd:PRK15249 171 KgSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLpgKRSLKSFSGTVTVTLVNDQGARI 244
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 27-153 2.50e-56

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 175.85  E-value: 2.50e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   27 IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKImYTGSQTLPS 106
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI-YTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 446805001  107 DRESVFWFNVLEVPPKANKNENsaaQNTLQLAFRTRIKLFYRPQGLG 153
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGG---QNGLQLALRSRIKLFYRPAGLA 123
lfpB PRK15290
fimbrial chaperone;
1-239 2.33e-45

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 152.07  E-value: 2.33e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   1 MLCHLRTAFTVITLTGTLLSnvAWADIVISGTRIVYRGAQKDVNVRLENKGSR-PLLVQTWLDTGNDNTEPgaiKVPFNA 79
Cdd:PRK15290  15 VSCKLFTAIILSVFLGQPAL--TYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDPFNKEDKS---KAPFTV 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  80 TPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKAnKNENSaaqNTLQLAFRTRIKLFYRPQGLGDLAGEA 159
Cdd:PRK15290  90 IPPVSRLEPSQEKVLRIIHTKGVSLPDDRESVFWLNIKNIPPSA-SNKAT---NSLEIAVKTRIKLFWRPASIRLIPEDA 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 160 PAKLTWrmkHEQGKSVVtVNNPTPYFVSFNSIelestgkkyIVDGQ-----MAAPLteTSFTLKTATTISSGKINYSFIN 234
Cdd:PRK15290 166 APKVKW---RREGRNLI-AENPNPIHISVMDV---------IVDGHdvplnMIRPF--ETLTLPLPANSAGGQMTWRFIN 230


                 ....*
gi 446805001 235 DFGGI 239
Cdd:PRK15290 231 DYGAV 235
PRK15208 PRK15208
molecular chaperone LpfB;
6-237 2.58e-40

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 138.50  E-value: 2.58e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   6 RTAFTVITLTgtLLSNVAWADIV-ISGTRIVYRGAQKDVNVRLENKG-SRPLLVQTWLDTGNdntepGAIKVPFNATPPV 83
Cdd:PRK15208   3 LISFTALALA--LIAQNSFAGGVaLSSTRVIYDGSKKEASLTVNNKSkTEEFLIQSWIDDAN-----GNKKTPFIITPPL 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  84 SRIDPKKGQTIKIMYTgSQTLPSDRESVFWFNVLEVPPKANKNENsaaQNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKL 163
Cdd:PRK15208  76 FKLDPTKNNVLRIVNI-TNTLPQDRESVYWINVKAIPAKSEDAEN---KNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKL 151

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446805001 164 TWRMKHEQgksvVTVNNPTPYFVSFNSI-----ELESTGkkyivdgqMAAPLTETSFTLKtATTISSGKINYSFINDFG 237
Cdd:PRK15208 152 RFTRAGNQ----IKVENPSAFNLTFNQFyangrDIEKAG--------MVPAKGSLNIELP-AGTGKVSEVKYNIINDFG 217
PRK15295 PRK15295
fimbrial assembly chaperone;
5-237 2.75e-40

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 138.54  E-value: 2.75e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   5 LRTAFTVITLTgtLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTepgAIKVPFNATPPVS 84
Cdd:PRK15295   1 KHIKKSVLVVL--LTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQV---TNKQAFIITPPLF 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  85 RIDPKKGQTIKIMYTGsQTLPSDRESVFWFNVLEVPpkanKNENSAAQNTLQLAFRTRIKLFYRPQGLGDLAGEAPA-KL 163
Cdd:PRK15295  76 RLDAGQKNSIRVIRSG-APLPADRESMYWLNIKGIP----SIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSqQL 150

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446805001 164 TWrmkhEQGKSVVTVNNPTPYFVSFNSIELEStgkKYIVDGQMAAPLTETSFTLKTaTTISSGKINYSFINDFG 237
Cdd:PRK15295 151 KW----QTAGDVITVNNPTPYYMNFASVTLNS---HEVKSATFVPPKSSASFKLGS-TAAPHGTVTWRLISDYG 216
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 14-247 6.08e-40

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 137.88  E-value: 6.08e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  14 LTGTLLSNV---AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPKK 90
Cdd:PRK15253  19 LSAVLLSAIilpAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVAAES 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  91 GQTIKIMYTGSqTLPSDRESVFWFNVLEVPPkaNKNENsAAQNTLQLAFRTRIKLFYRPQGLGdlageAPAKLTW-RMKH 169
Cdd:PRK15253  99 GQQIKIKKMPN-SLPDNKESLFYLNVLDIPP--NSQEN-AGKNVLKFAMQNRIKLIWRPSRIA-----AVTKDSFqRIGL 169

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446805001 170 EQGKSVVTVNNPTPYFVSFNSIElesTGKKYIVDGQ-MAAPLTETSFTLKTATTissGKINYSFINDFGGIINATASLQ 247
Cdd:PRK15253 170 FRSNKTVIMKNDTANWITVTDVK---AGNTKINDQTiMLPPLSTQNINMKYAST---SQYEVTIIDDNGNYISSKINVK 242
PRK15218 PRK15218
fimbrial assembly chaperone;
23-243 2.20e-39

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 135.88  E-value: 2.20e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  23 AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQ 102
Cdd:PRK15218  16 AWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVAANSGQQLKIKKLANN 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 103 tLPSDRESVFWFNVLEVPPKANKNENsaaQNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKLtwRMKHEQGkSVVTVNNpt 182
Cdd:PRK15218  96 -LPGDRESLFYLNVLDIPPNSDENKD---KNIIKFALQNRIKLIYRPPGVQKVDKATFSRL--QLLRAPG-SISVKNN-- 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446805001 183 pyfvSFNSIELESTGKKYIVDGQ--MAAPLTETSFTlktaTTISSGKINYSFINDFGGIINAT 243
Cdd:PRK15218 167 ----SANWITIPEIKAKSKVNKEtlLLAPWSSQSIT----TTVVVNSYTVTLIDDSGNYLNET 221
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 25-238 2.32e-38

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 133.37  E-value: 2.32e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  25 ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGaiKVPFNATPPVSRIDPKKGQTIKIMYTGSQtL 104
Cdd:PRK15299  22 AGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGASG--DAPFMVTPPLFRLNGGQKNVLRIIRTGGN-L 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 105 PSDRESVFWFNVLEVPPKANKNENsaaqNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKLTWRmkhEQGKSvVTVNNPTPY 184
Cdd:PRK15299  99 PEDRESLYWLDIKSIPSSNPDNKH----NTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWS---RQGRT-LTVKNPTPY 170

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446805001 185 FVSFNSIeleSTGKKYIVDGQMAAPLTETSFTLKTAttiSSGKINYSFINDFGG 238
Cdd:PRK15299 171 YMNFATL---SVGSQKVKAPRYVAPFGNAQYTLPAA---ASGPIAWSIINDFGG 218
PRK15246 PRK15246
fimbrial assembly chaperone;
17-247 4.12e-36

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 127.77  E-value: 4.12e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  17 TLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKI 96
Cdd:PRK15246   2 TGWYGPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  97 MYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQntLQLAFRTRIKLFYRPQGLGDLAGEAPAKLTWrMKHEQGksvV 176
Cdd:PRK15246  82 LLSSRQQLATDRESLFWLNIYQIPPVTQDIKNHPRK--LVLPLRLRLKILIRPTGLKAPTEAEEKKLRF-IAKENT---I 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446805001 177 TVNNPTPYFVSFNsieLESTGKKYIVDgQMAAPLTETSFTLKTATTISSgKINYSFINDFGGIINATASLQ 247
Cdd:PRK15246 156 RIVNPTSWYMSLT---LTMDNKKSIGD-IMVAPKTALDVPLTRSPTPGA-SINYAVINDSGNWRQYTAILE 221
PRK15195 PRK15195
molecular chaperone FimC;
1-243 3.11e-34

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 122.66  E-value: 3.11e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   1 MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRP-LLVQTWLDTGNDNTEPgaikvPFNA 79
Cdd:PRK15195   1 MMTKIKLGMIIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNErYLVNSWIENSSGVKEK-----SFIV 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  80 TPPVSRIDPKKGQTIKIMYTGsQTLPSDRESVFWFNVLEVPpKANKNeNSAAQNTLQLAFRTRIKLFYRPQGLGDLAGEA 159
Cdd:PRK15195  76 TPPLFVSEPKSENTLRIIYAG-PPLAADRESLFWMNVKAIP-SVDKN-ALEGRNVLQLAILSRIKLFVRPINLQELPEEA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 160 PAKLtwrmKHEQGKSVVTVNNPTPYFVSFnsIELESTGKKyiVDGQMAAPLTETSFTLKTATtisSGKINYSFINDFGGI 239
Cdd:PRK15195 153 PDTL----KFSRSGNHLKVHNPSPYYVTL--VNLQVGSQK--LGNAMIAPKVNSQIPLPSGV---QGKLKFQTVNDYGAV 221


                 ....
gi 446805001 240 INAT 243
Cdd:PRK15195 222 TPAR 225
PRK15211 PRK15211
fimbrial chaperone;
5-238 7.81e-33

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 119.16  E-value: 7.81e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   5 LRTAFTVITLTgtLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDtgndNTEPGAIKVPFNATPPVS 84
Cdd:PRK15211   4 MKWGLVSLLSL--AVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWID----NTTQGSSTVYMVPAPPFF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  85 RIDPKKGQTIKIMYTGSqTLPSDRESVFWFNVLEVPPKANKNENsaaqNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKLT 164
Cdd:PRK15211  78 KVRPKEKQIIRIMKTDS-ALPKDRESLFWLNVQEIPPKPKASEG----NVLAVALNTQVKLIYRPKALKEGRENAEKNLQ 152

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446805001 165 wrMKHEQGKSVvtVNNPTPYFVSFNSIELESTGKKYIVDGQ----MAAPLTETSFtlktATTISSGKINYSFINDFGG 238
Cdd:PRK15211 153 --IIHRGGETY--LKNPTPYYFAVTGVKLNGQPVKLSDRVMneiaQLAPFSEVSL----GKLSLNGTVTVQAVNDWGG 222
PRK15285 PRK15285
fimbrial chaperone StfD;
23-238 9.38e-30

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 111.80  E-value: 9.38e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  23 AWADIVISGTRIVYRGAQKDVNVRLENKGSR-PLLVQTWLDTgndntEPGA-IKVPFNATPPVSRIDPKKGQTIKIM-YT 99
Cdd:PRK15285  23 AQAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVED-----EKGVkITSPLIVVPPVQRIEPSAIGQVKIQgMP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 100 GSQTLPSDRESVFWFNVLEVPPKANKnensaaQNTLQLAFRTRIKLFYRPQGLGDLAGEAPakltWRMK---HEQGKSvV 176
Cdd:PRK15285  98 ALASLPQDRETLFYYNVREIPPQSDK------PNTLQIALQTRIKVFYRPQALSKIDMQHP----WQYKitlQRQGNG-Y 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446805001 177 TVNNPTPYFVSFNSIELEstgkkyiVDGQMAAPLTETSFTLKTATTI--SSGKINYS----FINDFGG 238
Cdd:PRK15285 167 QVSNPTGYYVVLSNASNR-------MDGTPARGFSPLVIAPKSNVTLggDASELGHSpvltYVNDYGA 227
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 12-238 4.18e-29

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 110.25  E-value: 4.18e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  12 ITLTGTLLSNVAwadIVISGTRIVYRGAQKDVNVRLEN-KGSRPLLVQTWLDtgnDNTEPGAIKVpFNATPPVSRIDPKK 90
Cdd:PRK15274  16 VLLAAPLVSHSA---IVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLE---DDKFAKDTRY-FTALPPLQRIEPKS 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  91 GQTIKIM-YTGSQTLPSDRESVFWFNVLEVPPKANKnensaaQNTLQLAFRTRIKLFYRPQGlgdLAGEAPAKLTWRMKH 169
Cdd:PRK15274  89 DGQVKVQpLPAAASLPQDRESLFYFNVREIPPKSDK------PNTLQLALQTRIKFFYRPVA---VARQVDKTHPWQTKL 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446805001 170 E---QGKSVVtVNNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTISSGKINYsfINDFGG 238
Cdd:PRK15274 160 TltyQGDGVI-FDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGY--VDDYGG 228
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 27-242 6.05e-29

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 109.08  E-value: 6.05e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  27 IVISGTRIVYRGAQKDVNVRLENKG-SRPLLVQTWLDTGNdntepGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSqTLP 105
Cdd:PRK15188  29 IALGATRVIYPQGSKQTSLPIINSSaSNVFLIQSWVANAD-----GSRSTDFIITPPLFVIQPKKENILRIMYVGP-SLP 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 106 SDRESVFWFNVLEVPpkaNKNENSAAQNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKLtwRMKHEQGKsvVTVNNPTPYF 185
Cdd:PRK15188 103 TDRESVFYLNSKAIP---SVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTL--RCRNERGQ--LTITNPSPYY 175

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446805001 186 VSFnsIELESTGKKyivdgqmaapLTETSFTLKTATTI--SSGKINYSFINDFGGIINA 242
Cdd:PRK15188 176 VSM--VELYSAGKK----------LPNTMVPPKGAITLpaTPGQVSLRTVNDFGATTPA 222
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 20-239 9.33e-28

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 106.01  E-value: 9.33e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  20 SNVAWADIVISGTRIVYRGAQKDVNVRLENKG-SRPLLVQTWLdTGNDNTEPGAIKvpfnATPPVSRIDPKKGQTIKIMY 98
Cdd:PRK15254  11 SQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWV-TDADGVRTDALM----ALPPLQRIDAGQKSQVRITQ 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  99 TGSQT--LPSDRESVFWFNVLEVPPKANKNensaaqNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKltwRMKHEQGKSVV 176
Cdd:PRK15254  86 VRGLTdkLPQDRETLFWFNVRGVPPKPEDD------NVLQLAMQSQLKLFYRPKAIIRSSSDQPER---KLTAERNAGHL 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446805001 177 TVNNPTPYFVSFNSIELESTGK-KYIVDGQMAAPLteTSFTLKTATTISSGKINYSFINDFGGI 239
Cdd:PRK15254 157 TLRNPTPYYITVAWLGADRSHRlSGFREGVMVPPL--GSLPLKAVLPAETRTLWVGYIDDYGGL 218
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
22-242 1.72e-22

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 92.07  E-value: 1.72e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  22 VAWAD--IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGN--DNTEPGAIKVPFNATPPVSRIDPKKGQTIKIM 97
Cdd:PRK15192  17 ISWAQagVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGrwPGTKNEGNITPFVVTPPLFMLSARQENSMRVV 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  98 YTGSqTLPSDRESVFWFNVLEVP---PKANKnensaaqntLQLAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGks 174
Cdd:PRK15192  97 YTGA-PLPADRESLFTLSIAAIPsgkPEANR---------VQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGA-- 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446805001 175 vvTVNNPTPYFVSFnsIELESTGKKYIVDGQMAAPLTETSFTLKTATTISsgkINYSFINDFGGIINA 242
Cdd:PRK15192 165 --TVRNPTPYYVTL--FLLRANERAQDNAGVVAPFATRQTDWCRHTVRCT---VRWQSINDYGRVMTA 225
PRK11385 PRK11385
fimbrial chaperone;
6-239 4.45e-21

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 88.27  E-value: 4.45e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   6 RTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLD--TGNDNTEPGAIKVPFNATPPV 83
Cdd:PRK11385   7 RLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrpTRWAGGEASTVPAPLLAAPPL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  84 SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEnsaaqnTLQLAFRTRIKLFYRPQGLGDLAGEAPAKL 163
Cdd:PRK11385  87 ILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQ------SVKVAMRSVFKLFWRPEGLPGDPLEAYQQL 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446805001 164 TWrMKHEQGksvVTVNNPTPYFVsfNSIELESTGKKyIVDGQMAAPLTETSFTLKTAttISSGKINYSFINDFGGI 239
Cdd:PRK11385 161 RW-TRNSQG---VQLTNPTPYYI--NLIQVSVNGKA-LSNAGVVPPKSQRQTSWCQA--IAPCHVAWRAINDYGGL 227
PRK15224 PRK15224
pili assembly chaperone PapD;
18-238 4.70e-19

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 82.87  E-value: 4.70e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  18 LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTepgaiKVPFNATPPVSRIDPKKGQTIKIM 97
Cdd:PRK15224  21 LNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS-----PAPFLVMPPLFRLEANQQSQLRIV 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  98 YTGSQtLPSDRESVFWFNVLEVPPKANKNENSAAQNT--LQLAFRTRIKLFYRPQGLGDLAGEAPAKLTWRmkhEQGKSv 175
Cdd:PRK15224  96 RTGGD-MPTDRETLQWVCIKAVPPENEPSDTQAKGATldLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWV---ETGNK- 170

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446805001 176 VTVNNPTPYFVSFNSIeleSTGKKYIVDGQMAAPLTETSFTLKTATtisSGKINYSFINDFGG 238
Cdd:PRK15224 171 LKVENPTPFYMNLASV---TVGGKPITGLEYIPPFADKTLNMPGSA---HGDIEWRVITDFGG 227
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 178-240 1.02e-15

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 69.21  E-value: 1.02e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446805001  178 VNNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTiSSGKINYSFINDFGGII 240
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTFAGLPAPA-AGGTVSYTYINDYGGIV 62
PRK15233 PRK15233
fimbrial chaperone SefB;
32-192 1.53e-11

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 62.43  E-value: 1.53e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  32 TRIVYRGAQKDVNVRLENKGSRPLLVQTwlDTGNDNTEPgaiKVPFNATPPVSRIDPKKGQTIKIMYTgSQTLPSDRESV 111
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKEYPILVQT--QVYNDDKSS---KAPFIVTPPILKVESNARTRLKVIPT-SNLFNKNEESL 120

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001 112 FWFNVLEVPP----KANKNENSAAQNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKLtwrmKHEQGKSVVTVNNPTPYFVS 187
Cdd:PRK15233 121 YWLCVKGVPPlndnESNNKNNITTNLNVNVVTNSCIKLIYRPKTIDLTTMEIADKL----KLERKGNSIVIKNPTSSYVN 196


                 ....*
gi 446805001 188 FNSIE 192
Cdd:PRK15233 197 IANIK 201
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 8-205 2.21e-05

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 44.26  E-value: 2.21e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001   8 AFTVITLTGTLL--SNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRP-LLVQTWLDTGNDNTepgaikVPFNATPPVS 84
Cdd:PRK09918   5 LFFLFTALVLLSssSAVHAAGMVPETSVVIVEESDGEGSINVKNTDSNPiLLYTTLVDLPEDKS------KLLLVTPPVA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446805001  85 RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNvlEVPPKANKNensaaqNTLQLAFRTRIKLFYRPQGLGDLagEAPAK-L 163
Cdd:PRK09918  79 RVEPGQSQQVRFILKSGSPLNTEHLLRVSFE--GVPPKPGGK------NKVVMPIRQDLPVLIQPAALPVV--RDPWKlL 148

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 446805001 164 TWRMKHEQgksvVTVNNPTPYFVSF-NSIELESTG------KKYIVDGQ 205
Cdd:PRK09918 149 VWSISGNN----LVVSNPSPYVVRLgQQVILLPSGkvvalpKPYILPGE 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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