autotransporter outer membrane beta-barrel domain-containing protein [Escherichia coli]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| autotrans_barl super family | cl36898 | outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ... |
5-62 | 2.76e-08 | ||
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis] The actual alignment was detected with superfamily member TIGR01414: Pssm-ID: 273608 [Multi-domain] Cd Length: 431 Bit Score: 47.76 E-value: 2.76e-08
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| Name | Accession | Description | Interval | E-value | ||
| autotrans_barl | TIGR01414 | outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ... |
5-62 | 2.76e-08 | ||
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis] Pssm-ID: 273608 [Multi-domain] Cd Length: 431 Bit Score: 47.76 E-value: 2.76e-08
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| AidA | COG3468 | Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
4-62 | 1.17e-04 | ||
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport]; Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 37.62 E-value: 1.17e-04
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| Name | Accession | Description | Interval | E-value | ||
| autotrans_barl | TIGR01414 | outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ... |
5-62 | 2.76e-08 | ||
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis] Pssm-ID: 273608 [Multi-domain] Cd Length: 431 Bit Score: 47.76 E-value: 2.76e-08
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| AidA | COG3468 | Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
4-62 | 1.17e-04 | ||
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport]; Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 37.62 E-value: 1.17e-04
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