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Conserved domains on  [gi|446902904|ref|WP_000980160|]
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MULTISPECIES: YsaB family lipoprotein [Enterobacteriaceae]

Protein Classification

YsaB family lipoprotein( domain architecture ID 10623709)

YsaB family lipoprotein similar to Escherichia coli uncharacterized lipoprotein YsaB

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YsaB pfam13983
YsaB-like lipoprotein; This family of proteins is functionally uncharacterized. These proteins ...
 25-99 8.81e-42

YsaB-like lipoprotein; This family of proteins is functionally uncharacterized. These proteins are related to E.coli YsaB. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. These proteins are lipoproteins.


:

Pssm-ID: 404804  Cd Length: 75  Bit Score: 131.63  E-value: 8.81e-42
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446902904  25 QKAQRVKVDPLRSLNMEALCKDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR 99
Cdd:pfam13983  1 QKAQRAHTAPVRQLDMEQLCKDQAAMRYNTRTQQLDVSQFEQFQGSYEVSGTTRREEHFTCSFDDAGQFLHLSMR 75
 
Name Accession Description Interval E-value
YsaB pfam13983
YsaB-like lipoprotein; This family of proteins is functionally uncharacterized. These proteins ...
 25-99 8.81e-42

YsaB-like lipoprotein; This family of proteins is functionally uncharacterized. These proteins are related to E.coli YsaB. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. These proteins are lipoproteins.


Pssm-ID: 404804  Cd Length: 75  Bit Score: 131.63  E-value: 8.81e-42
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446902904  25 QKAQRVKVDPLRSLNMEALCKDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR 99
Cdd:pfam13983  1 QKAQRAHTAPVRQLDMEQLCKDQAAMRYNTRTQQLDVSQFEQFQGSYEVSGTTRREEHFTCSFDDAGQFLHLSMR 75
 
Name Accession Description Interval E-value
YsaB pfam13983
YsaB-like lipoprotein; This family of proteins is functionally uncharacterized. These proteins ...
 25-99 8.81e-42

YsaB-like lipoprotein; This family of proteins is functionally uncharacterized. These proteins are related to E.coli YsaB. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. These proteins are lipoproteins.


Pssm-ID: 404804  Cd Length: 75  Bit Score: 131.63  E-value: 8.81e-42
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446902904  25 QKAQRVKVDPLRSLNMEALCKDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR 99
Cdd:pfam13983  1 QKAQRAHTAPVRQLDMEQLCKDQAAMRYNTRTQQLDVSQFEQFQGSYEVSGTTRREEHFTCSFDDAGQFLHLSMR 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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