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Conserved domains on  [gi|446930014|ref|WP_001007270|]
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MULTISPECIES: isochorismatase family protein [Bacillus]

Protein Classification

(2,3-dihydroxybenzoyl)adenylate synthase; cysteine hydrolase family protein( domain architecture ID 10215428)

(2,3-dihydroxybenzoyl)adenylate synthase catalyzes the activation of the carboxylate group of 2,3-dihydroxy-benzoate via a reversible ATP-dependent pyrophosphate exchange reactions to yield the acyladenylate intermediate (2,3-dihydroxybenzoyl)adenylate, such as in the biosynthesis of the siderophore enterobactin| cysteine hydrolase family protein related to isochorismatase and nicotinamidase; catalyzes the hydrolysis of a chemical bond using an active site cysteinyl residue

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
EntB1 COG1535
Isochorismate hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
12-212 2.80e-127

Isochorismate hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


:

Pssm-ID: 441144 [Multi-domain]  Cd Length: 204  Bit Score: 360.70  E-value: 2.80e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  12 PIESELPKNKVNWTPDPKRAVLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQPGGQTLEQRGLL 91
Cdd:COG1535    1 PTAADLPANKVSWTLDPARAALLIHDMQNYFLRPYDPDEPPIRELVANIARLRDACRAAGIPVVYTAQPGDQTPEDRGLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  92 QDFWGDGIPAGPDKKKIVDELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEP 171
Cdd:COG1535   81 NDFWGPGLTAGPEGQEIVDELAPAPGDTVLTKWRYSAFQRTDLEERLRELGRDQLIITGVYAHIGCLATAVDAFMRDIQP 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 446930014 172 FFVADAVADFSLEHHKQALEYASNRCAVTTSTNLLLKDLQS 212
Cdd:COG1535  161 FVVADAVADFSREEHRMALEYVAGRCGVVVTTDEVLEALRA 201
PP-binding pfam00550
Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached ...
224-283 6.62e-09

Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.


:

Pssm-ID: 425746 [Multi-domain]  Cd Length: 62  Bit Score: 51.41  E-value: 6.62e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446930014  224 QEVHELVAQLLREPVESIDIDEDLLNRGLDSVRIMSLVEKWRRE-GKEITFADLAERPTVA 283
Cdd:pfam00550   1 ERLRELLAEVLGVPAEEIDPDTDLFDLGLDSLLAVELIARLEEEfGVEIPPSDLFEHPTLA 61
 
Name Accession Description Interval E-value
EntB1 COG1535
Isochorismate hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
12-212 2.80e-127

Isochorismate hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441144 [Multi-domain]  Cd Length: 204  Bit Score: 360.70  E-value: 2.80e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  12 PIESELPKNKVNWTPDPKRAVLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQPGGQTLEQRGLL 91
Cdd:COG1535    1 PTAADLPANKVSWTLDPARAALLIHDMQNYFLRPYDPDEPPIRELVANIARLRDACRAAGIPVVYTAQPGDQTPEDRGLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  92 QDFWGDGIPAGPDKKKIVDELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEP 171
Cdd:COG1535   81 NDFWGPGLTAGPEGQEIVDELAPAPGDTVLTKWRYSAFQRTDLEERLRELGRDQLIITGVYAHIGCLATAVDAFMRDIQP 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 446930014 172 FFVADAVADFSLEHHKQALEYASNRCAVTTSTNLLLKDLQS 212
Cdd:COG1535  161 FVVADAVADFSREEHRMALEYVAGRCGVVVTTDEVLEALRA 201
isochorismatase cd01013
Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the ...
2-203 6.08e-122

Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems. Isochorismatase is part of the phenazine biosynthesis pathway. Phenazines are antimicrobial compounds that provide the competitive advantage for certain bacteria.


Pssm-ID: 238495  Cd Length: 203  Bit Score: 347.40  E-value: 6.08e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014   2 AIPSISVYKMPIESELPKNKVNWTPDPKRAVLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQPG 81
Cdd:cd01013    1 AIPKIASYPLPTAESFPANKVDWQIDPKRAVLLVHDMQRYFLDFYDESAEPVPQLIANIARLRDWCRQAGIPVVYTAQPG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  82 GQTLEQRGLLQDFWGDGIPAGPDKKKIVDELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTA 161
Cdd:cd01013   81 NQTPEQRALLNDFWGPGLTASPEETKIVTELAPQPDDTVLTKWRYSAFKRSPLLERLKESGRDQLIITGVYAHIGCLSTA 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 446930014 162 CEAFMDGIEPFFVADAVADFSLEHHKQALEYASNRCAVTTST 203
Cdd:cd01013  161 VDAFMRDIQPFVVADAIADFSLEEHRMALKYAATRCAMVVST 202
Isochorismatase pfam00857
Isochorismatase family; This family are hydrolase enzymes.
31-204 3.66e-47

Isochorismatase family; This family are hydrolase enzymes.


Pssm-ID: 376404 [Multi-domain]  Cd Length: 173  Bit Score: 156.02  E-value: 3.66e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014   31 AVLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQPGGQTLeQRGLLQDFWGDGIPAGPDKKKIVD 110
Cdd:pfam00857   1 TALLVIDMQNDFVDSGGPKVEGIAAILENINRLLKAARKAGIPVIFTRQVPEPDD-ADFALKDRPSPAFPPGTTGAELVP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  111 ELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEPFFVADAVADFSLEHHKQAL 190
Cdd:pfam00857  80 ELAPLPGDLVVDKTRFSAFAGTDLDEILRELGIDTLVLAGVATDVCVLSTARDALDRGYEVVVVSDACASLSPEAHDAAL 159
                         170
                  ....*....|....
gi 446930014  191 EYASNRCAVTTSTN 204
Cdd:pfam00857 160 ERLAQRGAEVTTTE 173
PLN02621 PLN02621
nicotinamidase
26-190 2.35e-24

nicotinamidase


Pssm-ID: 178229  Cd Length: 197  Bit Score: 97.16  E-value: 2.35e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  26 PDPKRAVLLIHDMQEYFldaySDKESPkveLISNIKMIREKCKQLGIPVVYTaQPGGQTLEQRGLLQDFW-GDGIPAGPD 104
Cdd:PLN02621  16 PDPKQAALLVIDMQNYF----SSMAEP---ILPALLTTIDLCRRASIPVFFT-RHSHKSPSDYGMLGEWWdGDLILDGTT 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014 105 KKKIVDELT-PDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEPFFVADAVADFSL 183
Cdd:PLN02621  88 EAELMPEIGrVTGPDEVVEKSTYSAFYNTRLEERLRKIGVKEVIVTGVMTNLCCETTAREAFVRGFRVFFSTDATATANE 167

                 ....*..
gi 446930014 184 EHHKQAL 190
Cdd:PLN02621 168 ELHEATL 174
PP-binding pfam00550
Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached ...
224-283 6.62e-09

Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.


Pssm-ID: 425746 [Multi-domain]  Cd Length: 62  Bit Score: 51.41  E-value: 6.62e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446930014  224 QEVHELVAQLLREPVESIDIDEDLLNRGLDSVRIMSLVEKWRRE-GKEITFADLAERPTVA 283
Cdd:pfam00550   1 ERLRELLAEVLGVPAEEIDPDTDLFDLGLDSLLAVELIARLEEEfGVEIPPSDLFEHPTLA 61
 
Name Accession Description Interval E-value
EntB1 COG1535
Isochorismate hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
12-212 2.80e-127

Isochorismate hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441144 [Multi-domain]  Cd Length: 204  Bit Score: 360.70  E-value: 2.80e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  12 PIESELPKNKVNWTPDPKRAVLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQPGGQTLEQRGLL 91
Cdd:COG1535    1 PTAADLPANKVSWTLDPARAALLIHDMQNYFLRPYDPDEPPIRELVANIARLRDACRAAGIPVVYTAQPGDQTPEDRGLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  92 QDFWGDGIPAGPDKKKIVDELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEP 171
Cdd:COG1535   81 NDFWGPGLTAGPEGQEIVDELAPAPGDTVLTKWRYSAFQRTDLEERLRELGRDQLIITGVYAHIGCLATAVDAFMRDIQP 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 446930014 172 FFVADAVADFSLEHHKQALEYASNRCAVTTSTNLLLKDLQS 212
Cdd:COG1535  161 FVVADAVADFSREEHRMALEYVAGRCGVVVTTDEVLEALRA 201
isochorismatase cd01013
Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the ...
2-203 6.08e-122

Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems. Isochorismatase is part of the phenazine biosynthesis pathway. Phenazines are antimicrobial compounds that provide the competitive advantage for certain bacteria.


Pssm-ID: 238495  Cd Length: 203  Bit Score: 347.40  E-value: 6.08e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014   2 AIPSISVYKMPIESELPKNKVNWTPDPKRAVLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQPG 81
Cdd:cd01013    1 AIPKIASYPLPTAESFPANKVDWQIDPKRAVLLVHDMQRYFLDFYDESAEPVPQLIANIARLRDWCRQAGIPVVYTAQPG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  82 GQTLEQRGLLQDFWGDGIPAGPDKKKIVDELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTA 161
Cdd:cd01013   81 NQTPEQRALLNDFWGPGLTASPEETKIVTELAPQPDDTVLTKWRYSAFKRSPLLERLKESGRDQLIITGVYAHIGCLSTA 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 446930014 162 CEAFMDGIEPFFVADAVADFSLEHHKQALEYASNRCAVTTST 203
Cdd:cd01013  161 VDAFMRDIQPFVVADAIADFSLEEHRMALKYAATRCAMVVST 202
AcpA COG3433
Acyl carrier protein/domain [Lipid transport and metabolism, Secondary metabolites ...
3-296 7.82e-65

Acyl carrier protein/domain [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442659 [Multi-domain]  Cd Length: 295  Bit Score: 205.37  E-value: 7.82e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014   3 IPSISVYKMPIESELPKNKVNWTPDPKRAVLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQPGG 82
Cdd:COG3433    1 IAIATPPPAPPTPDEPPPVIPPAIVQARALLLIVDLQGYFGGFGGEGGLLGAGLLLRIRLLAAAARAPFIPVPYPAQPGR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  83 QTLEQRGLLQDFWGDGIPAGPDKKKIVDELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTAC 162
Cdd:COG3433   81 QADDLRLLLRRGLGPGGGLERLVQQVVIRAERGEEEELLLVLRAAAVVRVAVLAALRGAGVGLLLIVGAVAALDGLAAAA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014 163 EAFMDGIEPFFVADAVADFSLEHHKQALEYASNRCAVTTSTNLLLKDLQSVKGDESEGITIQEVHELVAQLLREPVESID 242
Cdd:COG3433  161 ALAALDKVPPDVVAASAVVALDALLLLALKVVARAAPALAAAEALLAAASPAPALETALTEEELRADVAELLGVDPEEID 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446930014 243 IDEDLLNRGLDSVRIMSLVEKWRREGKEITFADLAERPTVAGWYSLLSSQTAQV 296
Cdd:COG3433  241 PDDNLFDLGLDSIRLMQLVERWRKAGLDVSFADLAEHPTLAAWWALLAAAQAAA 294
cysteine_hydrolases cd00431
Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine ...
32-192 8.69e-50

Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.


Pssm-ID: 238245 [Multi-domain]  Cd Length: 161  Bit Score: 162.44  E-value: 8.69e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  32 VLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQPGGQTLEQRGLLqdFWGDGIPAGPDKKKIVDE 111
Cdd:cd00431    1 ALLVVDMQNDFVPGGGLLLPGADELVPNINRLLAAARAAGIPVIFTRDWHPPDDPEFAEL--LWPPHCVKGTEGAELVPE 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014 112 LTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEPFFVADAVADFSLEHHKQALE 191
Cdd:cd00431   79 LAPLPDDLVIEKTRYSAFYGTDLDELLRERGIDTLVVCGIATDICVLATARDALDLGYRVIVVEDACATRDEEDHEAALE 158

                 .
gi 446930014 192 Y 192
Cdd:cd00431  159 R 159
Isochorismatase pfam00857
Isochorismatase family; This family are hydrolase enzymes.
31-204 3.66e-47

Isochorismatase family; This family are hydrolase enzymes.


Pssm-ID: 376404 [Multi-domain]  Cd Length: 173  Bit Score: 156.02  E-value: 3.66e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014   31 AVLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQPGGQTLeQRGLLQDFWGDGIPAGPDKKKIVD 110
Cdd:pfam00857   1 TALLVIDMQNDFVDSGGPKVEGIAAILENINRLLKAARKAGIPVIFTRQVPEPDD-ADFALKDRPSPAFPPGTTGAELVP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  111 ELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEPFFVADAVADFSLEHHKQAL 190
Cdd:pfam00857  80 ELAPLPGDLVVDKTRFSAFAGTDLDEILRELGIDTLVLAGVATDVCVLSTARDALDRGYEVVVVSDACASLSPEAHDAAL 159
                         170
                  ....*....|....
gi 446930014  191 EYASNRCAVTTSTN 204
Cdd:pfam00857 160 ERLAQRGAEVTTTE 173
PncA COG1335
Nicotinamidase-related amidase [Coenzyme transport and metabolism, General function prediction ...
31-201 5.67e-38

Nicotinamidase-related amidase [Coenzyme transport and metabolism, General function prediction only]; Nicotinamidase-related amidase is part of the Pathway/BioSystem: Pyrimidine degradation


Pssm-ID: 440946 [Multi-domain]  Cd Length: 169  Bit Score: 131.95  E-value: 5.67e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  31 AVLLIhDMQEYFLDAYSDKESPKVELISNIKMIREKCKQLGIPVVYTAQ---PGGQtleqRGLLQDFWGDGIPAGPDKKK 107
Cdd:COG1335    1 ALLVI-DVQNDFVPPGALAVPGADAVVANIARLLAAARAAGVPVIHTRDwhpPDGS----EFAEFDLWPPHCVPGTPGAE 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014 108 IVDELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEPFFVADAVADFSLEHHK 187
Cdd:COG1335   76 LVPELAPLPGDPVVDKTRYSAFYGTDLDELLRERGIDTLVVAGLATDVCVLSTARDALDLGYEVTVVEDACASRDPEAHE 155
                        170
                 ....*....|....
gi 446930014 188 QALEYASNRCAVTT 201
Cdd:COG1335  156 AALARLRAAGATVV 169
PLN02621 PLN02621
nicotinamidase
26-190 2.35e-24

nicotinamidase


Pssm-ID: 178229  Cd Length: 197  Bit Score: 97.16  E-value: 2.35e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  26 PDPKRAVLLIHDMQEYFldaySDKESPkveLISNIKMIREKCKQLGIPVVYTaQPGGQTLEQRGLLQDFW-GDGIPAGPD 104
Cdd:PLN02621  16 PDPKQAALLVIDMQNYF----SSMAEP---ILPALLTTIDLCRRASIPVFFT-RHSHKSPSDYGMLGEWWdGDLILDGTT 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014 105 KKKIVDELT-PDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEPFFVADAVADFSL 183
Cdd:PLN02621  88 EAELMPEIGrVTGPDEVVEKSTYSAFYNTRLEERLRKIGVKEVIVTGVMTNLCCETTAREAFVRGFRVFFSTDATATANE 167

                 ....*..
gi 446930014 184 EHHKQAL 190
Cdd:PLN02621 168 ELHEATL 174
YcaC_related cd01012
YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown ...
32-207 3.44e-15

YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.


Pssm-ID: 238494 [Multi-domain]  Cd Length: 157  Bit Score: 71.47  E-value: 3.44e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  32 VLLIHDMQEYFLDAYSDKEspkvELISNIKMIREKCKQLGIPVVYTAQ---PGGQTLEQrgllqdfwgdgipagpdkkki 108
Cdd:cd01012    1 ALLLVDVQEKLAPAIKSFD----ELINNTVKLAKAAKLLDVPVILTEQypkGLGPTVPE--------------------- 55
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014 109 VDELTPDEDDIflTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIgCLL-TACEAFMDGIEPFFVADAVADFSLEHHK 187
Cdd:cd01012   56 LREVFPDAPVI--EKTSFSCWEDEAFRKALKATGRKQVVLAGLETHV-CVLqTALDLLEEGYEVFVVADACGSRSKEDHE 132
                        170       180
                 ....*....|....*....|.
gi 446930014 188 QALE-YASNRCAVTTSTNLLL 207
Cdd:cd01012  133 LALArMRQAGAVLTTSESVLF 153
nicotinamidase_related cd01014
Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share ...
32-186 1.52e-14

Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.


Pssm-ID: 238496 [Multi-domain]  Cd Length: 155  Bit Score: 69.54  E-value: 1.52e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  32 VLLIHDMQEYFLDAySDKESPKVELISNIKMIREKCKQLGIPVVYTAQPGGQtleqrgllqdfwGDGIPAGPDKKKIVDE 111
Cdd:cd01014    1 ALLVIDVQNGYFDG-GLPPLNNEAALENIAALIAAARAAGIPVIHVRHIDDE------------GGSFAPGSEGWEIHPE 67
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446930014 112 LTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEPFFVADAVADFSLEHH 186
Cdd:cd01014   68 LAPLEGETVIEKTVPNAFYGTDLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACATFDLPDH 142
CSHase cd01015
N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, ...
33-203 9.10e-14

N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.


Pssm-ID: 238497 [Multi-domain]  Cd Length: 179  Bit Score: 68.20  E-value: 9.10e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  33 LLIHDMQEyfldAYSDKESPKVE----LISNIKMIREKCKQLGIPVVYTA---QPGGQtleQRGLlqdfWGDGIPAGPDK 105
Cdd:cd01015    2 LLVIDLVE----GYTQPGSYLAPgiaaALENVQRLLAAARAAGVPVIHTTvvyDPDGA---DGGL----WARKVPAMSDL 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014 106 KK------IVDELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHiGCL-LTACEAFMDGIEPFFVADAV 178
Cdd:cd01015   71 VEgsplaaICDELAPQEDEMVLVKKYASAFFGTSLAATLTARGVDTLIVAGCSTS-GCIrATAVDAMQHGFRPIVVRECV 149
                        170       180
                 ....*....|....*....|....*
gi 446930014 179 ADFSLEHHKQALEYASNRCAVTTST 203
Cdd:cd01015  150 GDRAPAPHEANLFDIDNKYGDVVST 174
PP-binding pfam00550
Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached ...
224-283 6.62e-09

Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.


Pssm-ID: 425746 [Multi-domain]  Cd Length: 62  Bit Score: 51.41  E-value: 6.62e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446930014  224 QEVHELVAQLLREPVESIDIDEDLLNRGLDSVRIMSLVEKWRRE-GKEITFADLAERPTVA 283
Cdd:pfam00550   1 ERLRELLAEVLGVPAEEIDPDTDLFDLGLDSLLAVELIARLEEEfGVEIPPSDLFEHPTLA 61
PRK11440 PRK11440
putative hydrolase; Provisional
27-210 4.06e-08

putative hydrolase; Provisional


Pssm-ID: 183137  Cd Length: 188  Bit Score: 52.42  E-value: 4.06e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  27 DPKRAVLLIHDMQEYFLdAYSDKESPKVELISNIKMIREKCKQLGIPVVYT----AQPGGQTLEQ-------RGLLQDFW 95
Cdd:PRK11440   5 NAKTTALVVIDLQEGIL-PFAGGPHTADEVVARAARLAAKFRASGSPVVLVrvgwSADYAEALKQpvdapspAKVLPENW 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  96 GDgIPAgpdkkkivdELTPDEDDIFLTKWRYSAFKKTNLLEILNEQGRNQLIICGIYAHIGCLLTACEAFMDGIEPFFVA 175
Cdd:PRK11440  84 WQ-HPA---------ALGKTDSDIEVTKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAE 153
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 446930014 176 DAVADFSLEHHKQALEYASNRCAVTTSTNLLLKDL 210
Cdd:PRK11440 154 DACSAASAEQHQNSMNHIFPRIARVRSVEEILNAL 188
PTZ00331 PTZ00331
alpha/beta hydrolase; Provisional
31-179 4.59e-03

alpha/beta hydrolase; Provisional


Pssm-ID: 240363  Cd Length: 212  Bit Score: 37.74  E-value: 4.59e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  31 AVLLIHDMQEYFLDAYSDKESPKVELISNIKMIREKCK-QLgipVVYT------------AQPGGQTLEQRGLLQDFWGD 97
Cdd:PTZ00331  13 DALIIVDVQNDFCKGGSLAVPDAEEVIPVINQVRQSHHfDL---VVATqdwhppnhisfaSNHGKPKILPDGTTQGLWPP 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446930014  98 GIPAGPDKKKIVDELTPDEDDIFLTKWR------YSAF-----KKTNLLEILNEQGRNQLIICGIyAHIGCLL-TACEAF 165
Cdd:PTZ00331  90 HCVQGTKGAQLHKDLVVERIDIIIRKGTnrdvdsYSAFdndkgSKTGLAQILKAHGVRRVFICGL-AFDFCVLfTALDAV 168
                        170
                 ....*....|....
gi 446930014 166 MDGIEPFFVADAVA 179
Cdd:PTZ00331 169 KLGFKVVVLEDATR 182
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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