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DUF637 domain-containing protein [Acinetobacter baumannii]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
TPS
pfam05860 TPS secretion domain; Filamentous hemagglutinin (FHA), the major 230-kDa adhesin of the ...
76-349
1.19e-35
TPS secretion domain; Filamentous hemagglutinin (FHA), the major 230-kDa adhesin of the whooping cough agent Bordetella pertussis, is one of the most efficiently secreted proteins in Gram-negative bacteria. FHA is secreted by means of the two-partner secretion (TPS) pathway. A TPS system is composed of two separate proteins, with TpsA the secreted protein and TpsB its associated specific outer-membrane transporter. All TPS-secreted proteins contain a distinctive N-proximal module essential for secretion, the TPS domain. The TPS domain folds into a beta-helix. This domain is found in a wide variety of secreted proteins from bacterial pathogens.
Pssm-ID: 461762 [Multi-domain]
Cd Length: 249
Bit Score: 136.68
E-value: 1.19e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 76 A D I VA D SAANAANRA V iaagk NSA G TT VP V VNI Q TP - KN G ISH N IYK QF D V LAE GAVL N NS R qgattktvgavaanpfla 154
Cdd:pfam05860 1 A Q I TP D GTLPTNGPT V ----- LQT G NG VP I VNI A TP n AG G NLF N SFS QF N V GPG GAVL F NS P ------------------ 57
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 155 t GE A RV ILN E V NSSAA S RFE G NL E VA G QM A DVII ANP S GI NIK G GG FIN ANKAIF TT GK P QLNADGSIKQFTVDQGRI TV 234
Cdd:pfam05860 58 - TD A QN ILN R V TGGNP S QIQ G YI E AN G TR A NLFL ANP N GI IFG G NA FIN IGGSFL TT TA P SIKFGDGTEFNPSSVPLG TV 136
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 235 S ANPNSK FG lggnn NDAN Y V DL Y ARA LELSAELR A KNDIQVI AG A N N V S - ADLQEVTAKTGTGT A PAL A V D VKA LG G MYA 313
Cdd:pfam05860 137 S VPGGGQ FG ----- SNGG Y I DL I ARA VDNNGQVP A GKTLALV AG N N D V D g GAPGGRVEIGSVTA A GTV A I D AAS LG S MYA 211
250 260 270
....*....|....*....|....*....|....*...
gi 446961779 314 N NI Y L M GT E KG L GV TN A - G T L Q A VN - N L VI TSAG K I EN 349
Cdd:pfam05860 212 G NI R L I GT D KG A GV RL A n G S L V A SG g D L NG TSAG D I QL 249
DUF637
pfam04830 Possible hemagglutinin (DUF637); This family represents a conserved region found in a ...
1470-1625
4.53e-27
Possible hemagglutinin (DUF637); This family represents a conserved region found in a bacterial protein which may be a hemagglutinin or hemolysin.
Pssm-ID: 428148
Cd Length: 166
Bit Score: 109.43
E-value: 4.53e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1470 AA VT SLA A QA SIG LINN G GD I GKTLK EM GS K DS I K N LA ASV VTAG L LS QVG -------------- TA L NLKPDSTLLSD R 1535
Cdd:pfam04830 2 AA MA SLA S QA AVS LINN K GD L GKTLK DL GS S DS V K S LA TAM VTAG A LS GID laslagvqdvnkna VP L LDNGTWSGVAQ R 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1536 LA N N F A S SV G S TL V Q TAINGG DLG DNL QV ALL AGLAGALQG E L A SQ IG TSLD kvdpn IFEYTIHK IAHA V VGCA T A A A TK 1615
Cdd:pfam04830 82 LA A N L A Q SV I S AG V N TAINGG SFK DNL TT ALL SAIVSQFNA E G A NL IG DNGE ----- QLGLPAKA IAHA A VGCA S A E A SG 156
170
....*....|
gi 446961779 1616 QS C EA GAIGA 1625
Cdd:pfam04830 157 GD C AG GAIGA 166
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
200-1109
1.21e-11
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 70.57
E-value: 1.21e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 200 GF I N A NKA I FTT G KPQL N AD GS IKQF T VDQGRITVSANPNSKF G L GG N N NDANYVDLYARALELSAELR A KNDIQVIAG A 279
Cdd:COG3210 796 ID I T A DGT I TAA G TTAI N VT GS GGTI T INTATTGLTGTGDTTS G A GG S N TTDTTTGTTSDGASGGGTAG A NSGSLAATA A 875
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 280 NNVSADLQEV T AKTGTGTAPALAVDVKALGGMYANNI ylmgtek GLG VT NA GT LQAVNNLVITS AG KIENNGTIKTTGSQ 359
Cdd:COG3210 876 SITVGSGGVA T STGTANAGTLTNLGTTTNAASGNGAV ------- LAT VT AT GT GGGGLTGGNAA AG GTGAGNGTTALSGT 948
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 360 NSVLN LS SQNNG D FTSSGAIQ S NGNIFISSDRNLALNGGKIDKLG T TLSSIFL S AKGDVSLQNGVN I QNA G V G GGIYSDS 439
Cdd:COG3210 949 QGNAG LS AASAS D GAGDTGAS S AAGSSAVGTSANSAGSTGGVIAA T GILVAGN S GTTASTTGGSGA I VAG G N G VTGTTGT 1028
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 440 LNFNLGKDSNILSQGDISLLANNN I DIQ N GKGI T SNNDLNIQSKNNLNIANSSIESKA G NVNLIS LG NTASSLLGINNTK 519
Cdd:COG3210 1029 ASATGTGTAATAGGQNGVGVNASG I SGG N AAAL T ASGTAGTTGGTAASNGGGGTAQAS G AGTTHT LG GITNGGATGTSGG 1108
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 520 LYAGKDFNIKGAKNIKLNSSIVQENSNNINLYADNDIEIGND VS P V SLKTQGTINIAAKNNLILR T D T SLLTKKNIDVQT 599
Cdd:COG3210 1109 TTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVA VS A V AGGASSASAGDTTAVAAAT T T T TGSAINGGADSA 1188
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 600 DIGNLYAKS L NVSS S E G KVSILGNGNVNLE T QNDGWYTLK N RINAKNGIILGSKGEN A ITKINTVDLKS T DGNVLLL S G G 679
Cdd:COG3210 1189 ATEGTAGTD L KGGD S T G GSTTTIGTTNVTT T TTLTASDTG N TTATGGSSAGQTGSFV A AGSASGTGDAT T GATAGAV S N G 1268
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 680 DLTLDGN N GYT T GMKAA V AS G FIN A KDVTLWSK T GVLDISSGVINASN G GISIR A GNN A QVHDIDLNSTKNIEINSDKDL 759
Cdd:COG3210 1269 ATSTVAG N AGA T ATGST V DI G STS A TSAGGSLD T TGNTAGANGATVGT G IGGTT A TGT A VAAVNSGGVNAGGGTINTTAA 1348
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 760 ILERTNTRANQHI A LSSKGNIN A yq NYILDAK G VLSAISNGSIDGQGY G GAVIVEANQLSNNGIDFRAT G SELLQLDTKL 839
Cdd:COG3210 1349 NTGLNGGNGATDS A AGAGSGGA A -- GSLAATA G AGTVLTGAGNNTGAE G TNAGRDGGVTTSGTGVGNNG G VSGTTVAGTT 1426
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 840 KNINGNLSIQLNKDFVIKPTHGHDTITLVAENDIDVR S KQ GA IRIEGE N FAPNLNEA G FVGIISRK G GLSLEGTSVDIKG 919
Cdd:COG3210 1427 GSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNA S SL GA GGSTAG N AVGGAVIG G TTTGGNGA G VAGATASNGGTST 1506
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 920 TKINVQKDINIVST K GD L VIDGIADKVNG V SKKKDLINSQDDQEKKNFIANTIT GV ENFNSELS T NTGNINISSKKGVSI 999
Cdd:COG3210 1507 GAGGTAGGTTAEVA K AS L EGGEGTYGGSS V AEAGTGGGILGAVSGAGSEGGAAG GV TGSVGVGG T DGAGGDTGGADDTGA 1586
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1000 TGANIDAKQGIVNIQ A Q G VLNGKYRA T AKKE GT TAKELSASIIIDGNLDVYEKGNETDQNYSYREYVNP T NINGNK G VNI 1079
Cdd:COG3210 1587 QAPTAGNTATLTLSL A E G TNAEYGGT T NVTS GT AGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGT T LSGAVN G AGN 1666
890 900 910
....*....|....*....|....*....|
gi 446961779 1080 RAIGKTVNDN L VLQ G VGINS A Q G D V NIEAD 1109
Cdd:COG3210 1667 GWAVDLTDAT L AGL G GATTA A A G N V ATGDT 1696
ESPR
pfam13018 Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for ...
1-37
6.67e-10
Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for Extended Signal Peptide Region. It is present at the N-terminus of the signal peptides of proteins belonging to the Type V secretion systems, including the autotransporters (T5aSS), TpsA exoproteins of the two-partner system (T5bSS) and trimeric autotransporters (TAAs). So far, the ESPR is present only in Gram-negative bacterial proteins originating from the classes Beta- and Gamma-proteobacteria. ESPR severely impairs inner membrane translocation, suggesting that it adopts a particular conformation or it interacts with a cytoplasmic or inner membrane co-factor, prior to exportation. Deletion of ESPR causes mis-folding of the TAAs passenger domain in the periplasm, substantially impairing its translocation across the outer membrane.
Pssm-ID: 463773 [Multi-domain]
Cd Length: 50
Bit Score: 56.00
E-value: 6.67e-10
10 20 30
....*....|....*....|....*....|....*..
gi 446961779 1 MNK n L YR I I F N K AR NMFMA V A E NVR S QS K AAGQ SS S S 37
Cdd:pfam13018 1 MNK - I YR V I W N R AR GAWVV V S E LAK S KG K SSSS SS G S 36
HNHc
cd00085 HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic ...
1838-1889
2.02e-07
HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.
Pssm-ID: 238038 [Multi-domain]
Cd Length: 57
Bit Score: 49.39
E-value: 2.02e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 446961779 1838 R GKFIQEWYKRG Y ETPR GG WSEYDIH HI K P REF GG T N EFW NL TPVQ RK T H QQ 1889
Cdd:cd00085 4 R LVLLARDGLCP Y CGKP GG TEGLEVD HI I P LSD GG N N DLD NL VLLC RK C H RK 55
PT-VENN
pfam04829 Pre-toxin domain with VENN motif; This family represents a conserved region found in many ...
1644-1690
1.03e-04
Pre-toxin domain with VENN motif; This family represents a conserved region found in many bacterial porlymorphic toxins which is located before the C-terminal toxin modules.
Pssm-ID: 428147
Cd Length: 52
Bit Score: 41.56
E-value: 1.03e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 446961779 1644 D LT DA E RTKIKDT S K L I AG TTAAFA G Y --- D VN T A A NS A NI AVENN T L GK 1690
Cdd:pfam04829 3 E LT EE E KQTVSAL S T L A AG LAGGVV G G sta D AV T G A QA A KN AVENN F L SD 52
Name
Accession
Description
Interval
E-value
TPS
pfam05860 TPS secretion domain; Filamentous hemagglutinin (FHA), the major 230-kDa adhesin of the ...
76-349
1.19e-35
TPS secretion domain; Filamentous hemagglutinin (FHA), the major 230-kDa adhesin of the whooping cough agent Bordetella pertussis, is one of the most efficiently secreted proteins in Gram-negative bacteria. FHA is secreted by means of the two-partner secretion (TPS) pathway. A TPS system is composed of two separate proteins, with TpsA the secreted protein and TpsB its associated specific outer-membrane transporter. All TPS-secreted proteins contain a distinctive N-proximal module essential for secretion, the TPS domain. The TPS domain folds into a beta-helix. This domain is found in a wide variety of secreted proteins from bacterial pathogens.
Pssm-ID: 461762 [Multi-domain]
Cd Length: 249
Bit Score: 136.68
E-value: 1.19e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 76 A D I VA D SAANAANRA V iaagk NSA G TT VP V VNI Q TP - KN G ISH N IYK QF D V LAE GAVL N NS R qgattktvgavaanpfla 154
Cdd:pfam05860 1 A Q I TP D GTLPTNGPT V ----- LQT G NG VP I VNI A TP n AG G NLF N SFS QF N V GPG GAVL F NS P ------------------ 57
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 155 t GE A RV ILN E V NSSAA S RFE G NL E VA G QM A DVII ANP S GI NIK G GG FIN ANKAIF TT GK P QLNADGSIKQFTVDQGRI TV 234
Cdd:pfam05860 58 - TD A QN ILN R V TGGNP S QIQ G YI E AN G TR A NLFL ANP N GI IFG G NA FIN IGGSFL TT TA P SIKFGDGTEFNPSSVPLG TV 136
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 235 S ANPNSK FG lggnn NDAN Y V DL Y ARA LELSAELR A KNDIQVI AG A N N V S - ADLQEVTAKTGTGT A PAL A V D VKA LG G MYA 313
Cdd:pfam05860 137 S VPGGGQ FG ----- SNGG Y I DL I ARA VDNNGQVP A GKTLALV AG N N D V D g GAPGGRVEIGSVTA A GTV A I D AAS LG S MYA 211
250 260 270
....*....|....*....|....*....|....*...
gi 446961779 314 N NI Y L M GT E KG L GV TN A - G T L Q A VN - N L VI TSAG K I EN 349
Cdd:pfam05860 212 G NI R L I GT D KG A GV RL A n G S L V A SG g D L NG TSAG D I QL 249
DUF637
pfam04830 Possible hemagglutinin (DUF637); This family represents a conserved region found in a ...
1470-1625
4.53e-27
Possible hemagglutinin (DUF637); This family represents a conserved region found in a bacterial protein which may be a hemagglutinin or hemolysin.
Pssm-ID: 428148
Cd Length: 166
Bit Score: 109.43
E-value: 4.53e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1470 AA VT SLA A QA SIG LINN G GD I GKTLK EM GS K DS I K N LA ASV VTAG L LS QVG -------------- TA L NLKPDSTLLSD R 1535
Cdd:pfam04830 2 AA MA SLA S QA AVS LINN K GD L GKTLK DL GS S DS V K S LA TAM VTAG A LS GID laslagvqdvnkna VP L LDNGTWSGVAQ R 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1536 LA N N F A S SV G S TL V Q TAINGG DLG DNL QV ALL AGLAGALQG E L A SQ IG TSLD kvdpn IFEYTIHK IAHA V VGCA T A A A TK 1615
Cdd:pfam04830 82 LA A N L A Q SV I S AG V N TAINGG SFK DNL TT ALL SAIVSQFNA E G A NL IG DNGE ----- QLGLPAKA IAHA A VGCA S A E A SG 156
170
....*....|
gi 446961779 1616 QS C EA GAIGA 1625
Cdd:pfam04830 157 GD C AG GAIGA 166
Haemagg_act
smart00912 haemagglutination activity domain; This domain is suggested to be a carbohydrate- dependent ...
103-219
1.41e-18
haemagglutination activity domain; This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.
Pssm-ID: 214908 [Multi-domain]
Cd Length: 119
Bit Score: 83.10
E-value: 1.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 103 V PVVNI Q TP kng I SHN I Y KQ F D V LAE G -- AV LNN SRQ g ATTKT VGA VAANP F LAT G E A R VILN E V NSSAA S RFE G N LEVA 180
Cdd:smart00912 4 L PVVNI V TP --- N SHN Q Y SS F N V GTR G vn QI LNN AIN - WQSFS VGA GETVN F NQP G S A S VILN R V TGGNP S QIN G A LEVA 79
90 100 110 120
....*....|....*....|....*....|....*....|
gi 446961779 181 G QM A D V IIA N PS G INIK G G G F I - N ANKAIFT T GK P QLNAD 219
Cdd:smart00912 80 G KA A G V VFL N NP G GIVF G C G A I v N VGGVTVA T TL P IIDDG 119
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
200-1109
1.21e-11
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 70.57
E-value: 1.21e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 200 GF I N A NKA I FTT G KPQL N AD GS IKQF T VDQGRITVSANPNSKF G L GG N N NDANYVDLYARALELSAELR A KNDIQVIAG A 279
Cdd:COG3210 796 ID I T A DGT I TAA G TTAI N VT GS GGTI T INTATTGLTGTGDTTS G A GG S N TTDTTTGTTSDGASGGGTAG A NSGSLAATA A 875
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 280 NNVSADLQEV T AKTGTGTAPALAVDVKALGGMYANNI ylmgtek GLG VT NA GT LQAVNNLVITS AG KIENNGTIKTTGSQ 359
Cdd:COG3210 876 SITVGSGGVA T STGTANAGTLTNLGTTTNAASGNGAV ------- LAT VT AT GT GGGGLTGGNAA AG GTGAGNGTTALSGT 948
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 360 NSVLN LS SQNNG D FTSSGAIQ S NGNIFISSDRNLALNGGKIDKLG T TLSSIFL S AKGDVSLQNGVN I QNA G V G GGIYSDS 439
Cdd:COG3210 949 QGNAG LS AASAS D GAGDTGAS S AAGSSAVGTSANSAGSTGGVIAA T GILVAGN S GTTASTTGGSGA I VAG G N G VTGTTGT 1028
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 440 LNFNLGKDSNILSQGDISLLANNN I DIQ N GKGI T SNNDLNIQSKNNLNIANSSIESKA G NVNLIS LG NTASSLLGINNTK 519
Cdd:COG3210 1029 ASATGTGTAATAGGQNGVGVNASG I SGG N AAAL T ASGTAGTTGGTAASNGGGGTAQAS G AGTTHT LG GITNGGATGTSGG 1108
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 520 LYAGKDFNIKGAKNIKLNSSIVQENSNNINLYADNDIEIGND VS P V SLKTQGTINIAAKNNLILR T D T SLLTKKNIDVQT 599
Cdd:COG3210 1109 TTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVA VS A V AGGASSASAGDTTAVAAAT T T T TGSAINGGADSA 1188
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 600 DIGNLYAKS L NVSS S E G KVSILGNGNVNLE T QNDGWYTLK N RINAKNGIILGSKGEN A ITKINTVDLKS T DGNVLLL S G G 679
Cdd:COG3210 1189 ATEGTAGTD L KGGD S T G GSTTTIGTTNVTT T TTLTASDTG N TTATGGSSAGQTGSFV A AGSASGTGDAT T GATAGAV S N G 1268
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 680 DLTLDGN N GYT T GMKAA V AS G FIN A KDVTLWSK T GVLDISSGVINASN G GISIR A GNN A QVHDIDLNSTKNIEINSDKDL 759
Cdd:COG3210 1269 ATSTVAG N AGA T ATGST V DI G STS A TSAGGSLD T TGNTAGANGATVGT G IGGTT A TGT A VAAVNSGGVNAGGGTINTTAA 1348
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 760 ILERTNTRANQHI A LSSKGNIN A yq NYILDAK G VLSAISNGSIDGQGY G GAVIVEANQLSNNGIDFRAT G SELLQLDTKL 839
Cdd:COG3210 1349 NTGLNGGNGATDS A AGAGSGGA A -- GSLAATA G AGTVLTGAGNNTGAE G TNAGRDGGVTTSGTGVGNNG G VSGTTVAGTT 1426
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 840 KNINGNLSIQLNKDFVIKPTHGHDTITLVAENDIDVR S KQ GA IRIEGE N FAPNLNEA G FVGIISRK G GLSLEGTSVDIKG 919
Cdd:COG3210 1427 GSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNA S SL GA GGSTAG N AVGGAVIG G TTTGGNGA G VAGATASNGGTST 1506
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 920 TKINVQKDINIVST K GD L VIDGIADKVNG V SKKKDLINSQDDQEKKNFIANTIT GV ENFNSELS T NTGNINISSKKGVSI 999
Cdd:COG3210 1507 GAGGTAGGTTAEVA K AS L EGGEGTYGGSS V AEAGTGGGILGAVSGAGSEGGAAG GV TGSVGVGG T DGAGGDTGGADDTGA 1586
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1000 TGANIDAKQGIVNIQ A Q G VLNGKYRA T AKKE GT TAKELSASIIIDGNLDVYEKGNETDQNYSYREYVNP T NINGNK G VNI 1079
Cdd:COG3210 1587 QAPTAGNTATLTLSL A E G TNAEYGGT T NVTS GT AGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGT T LSGAVN G AGN 1666
890 900 910
....*....|....*....|....*....|
gi 446961779 1080 RAIGKTVNDN L VLQ G VGINS A Q G D V NIEAD 1109
Cdd:COG3210 1667 GWAVDLTDAT L AGL G GATTA A A G N V ATGDT 1696
adhes_NPXG
TIGR01901 filamentous hemagglutinin family N-terminal domain; This model represents a conserved domain ...
117-215
6.26e-10
filamentous hemagglutinin family N-terminal domain; This model represents a conserved domain found near the N-terminus of a number of large, repetitive bacterial proteins, including many proteins of over 2500 amino acids. Members generally have a signal sequence, then an intervening region, then the region described by this model. Following this region, proteins typically have regions rich in repeats but may show no homology between the repeats of one member and the repeats of another. A number of the members of this family have been designated adhesins, filamentous haemagglutinins, heme/hemopexin-binding protein, etc.
Pssm-ID: 273865
Cd Length: 79
Bit Score: 57.29
E-value: 6.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 117 H N IYK QF D V LAE G A V LN N S rqgattktvgavaanpfla TGE A RV ILN E V NSSA AS RFE G N L E V A G Q m A D V IIA NP S GI NI 196
Cdd:TIGR01901 1 F N NWQ QF N V GQG G T V TF N Q ------------------- PPA A SN ILN R V TGGS AS QIQ G L L Q V N G K - A N V FLI NP N GI IF 60
90
....*....|....*....
gi 446961779 197 K GG GF IN ANKAIFT T GKPQ 215
Cdd:TIGR01901 61 G GG AQ IN VGGLVAS T TAIS 79
ESPR
pfam13018 Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for ...
1-37
6.67e-10
Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for Extended Signal Peptide Region. It is present at the N-terminus of the signal peptides of proteins belonging to the Type V secretion systems, including the autotransporters (T5aSS), TpsA exoproteins of the two-partner system (T5bSS) and trimeric autotransporters (TAAs). So far, the ESPR is present only in Gram-negative bacterial proteins originating from the classes Beta- and Gamma-proteobacteria. ESPR severely impairs inner membrane translocation, suggesting that it adopts a particular conformation or it interacts with a cytoplasmic or inner membrane co-factor, prior to exportation. Deletion of ESPR causes mis-folding of the TAAs passenger domain in the periplasm, substantially impairing its translocation across the outer membrane.
Pssm-ID: 463773 [Multi-domain]
Cd Length: 50
Bit Score: 56.00
E-value: 6.67e-10
10 20 30
....*....|....*....|....*....|....*..
gi 446961779 1 MNK n L YR I I F N K AR NMFMA V A E NVR S QS K AAGQ SS S S 37
Cdd:pfam13018 1 MNK - I YR V I W N R AR GAWVV V S E LAK S KG K SSSS SS G S 36
HNHc
cd00085 HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic ...
1838-1889
2.02e-07
HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.
Pssm-ID: 238038 [Multi-domain]
Cd Length: 57
Bit Score: 49.39
E-value: 2.02e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 446961779 1838 R GKFIQEWYKRG Y ETPR GG WSEYDIH HI K P REF GG T N EFW NL TPVQ RK T H QQ 1889
Cdd:cd00085 4 R LVLLARDGLCP Y CGKP GG TEGLEVD HI I P LSD GG N N DLD NL VLLC RK C H RK 55
PT-VENN
pfam04829 Pre-toxin domain with VENN motif; This family represents a conserved region found in many ...
1644-1690
1.03e-04
Pre-toxin domain with VENN motif; This family represents a conserved region found in many bacterial porlymorphic toxins which is located before the C-terminal toxin modules.
Pssm-ID: 428147
Cd Length: 52
Bit Score: 41.56
E-value: 1.03e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 446961779 1644 D LT DA E RTKIKDT S K L I AG TTAAFA G Y --- D VN T A A NS A NI AVENN T L GK 1690
Cdd:pfam04829 3 E LT EE E KQTVSAL S T L A AG LAGGVV G G sta D AV T G A QA A KN AVENN F L SD 52
AidA
COG3468 Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
75-433
1.14e-04
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain]
Cd Length: 846
Bit Score: 47.25
E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 75 YADIVADSAANAANRAVIAA G KNSA G TTVPVVNIQTPKN G ISHNIYKQFDVLAE G AVLNNSRQ G ATTKTV GA V AA NPFLA 154
Cdd:COG3468 83 GTGGNSTGGGGGNSGTGGTG G GGGG G GSGNGGGGGGGGG G GGTGGGGGGGTGSA G GGGGGGGG G TGVGGT GA A AA GGGTG 162
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 155 T G EARVILNEVNSSAASRFE G NLEV AG QMADVIIANPS G INIK GG GFINANKAIFTT G KPQLNADGSIKQF T VDQGRITV 234
Cdd:COG3468 163 S G GGGSGGGGGAGGGGGGGA G GSGG AG STGSGAGGGGG G SGGG GG AAGTGGGGGGGG G AGGATGGAGSGGN T GGGVGGGG 242
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 235 SANPNSKF G LGGNNND A NYVDLYARALEL S AELRAKNDIQVIA G ANNVSADLQEVTAK --- T G T G TAPALAVDVKALGGM 311
Cdd:COG3468 243 GSAGGTGG G GLTGGGA A GTGGGGGGTGTG S GGGGGGGANGGGS G GGGGASGTGGGGTA stg G G G G GGGGNGGGGGGGSNA 322
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 312 YANNIYLM G TEK G L G VTNAGTLQ A VNNLVI T S A GKIENN G TIKTT G SQNSVLNLSSQNN G DFTSSGAIQSN G NIFISSDR 391
Cdd:COG3468 323 GGGSGGGG G GGG G G G GGGTTLNG A GSAGGG T G A ALAGTG G SGSGG G GGGGSGGGGGAGG G GANTGSDGVGT G LTTGGTGN 402
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 446961779 392 N LALNG G KIDKL G T TL SSIF L SAK G DVSLQ NG VNIQ N AGV G G 433
Cdd:COG3468 403 N GGGGV G GGGGG G L TL TGGT L TVN G NYTGN NG TLVL N TVL G D 444
HNHc
smart00507 HNH nucleases;
1858-1888
1.87e-04
HNH nucleases;
Pssm-ID: 214702 [Multi-domain]
Cd Length: 52
Bit Score: 40.90
E-value: 1.87e-04
10 20 30
....*....|....*....|....*....|.
gi 446961779 1858 SEYDIH HI K P REF GG TNEFW NL TPVQR K T H Q 1888
Cdd:smart00507 22 EGLEVD HI I P LSD GG NDDLD NL VLLCP K C H I 52
Name
Accession
Description
Interval
E-value
TPS
pfam05860 TPS secretion domain; Filamentous hemagglutinin (FHA), the major 230-kDa adhesin of the ...
76-349
1.19e-35
TPS secretion domain; Filamentous hemagglutinin (FHA), the major 230-kDa adhesin of the whooping cough agent Bordetella pertussis, is one of the most efficiently secreted proteins in Gram-negative bacteria. FHA is secreted by means of the two-partner secretion (TPS) pathway. A TPS system is composed of two separate proteins, with TpsA the secreted protein and TpsB its associated specific outer-membrane transporter. All TPS-secreted proteins contain a distinctive N-proximal module essential for secretion, the TPS domain. The TPS domain folds into a beta-helix. This domain is found in a wide variety of secreted proteins from bacterial pathogens.
Pssm-ID: 461762 [Multi-domain]
Cd Length: 249
Bit Score: 136.68
E-value: 1.19e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 76 A D I VA D SAANAANRA V iaagk NSA G TT VP V VNI Q TP - KN G ISH N IYK QF D V LAE GAVL N NS R qgattktvgavaanpfla 154
Cdd:pfam05860 1 A Q I TP D GTLPTNGPT V ----- LQT G NG VP I VNI A TP n AG G NLF N SFS QF N V GPG GAVL F NS P ------------------ 57
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 155 t GE A RV ILN E V NSSAA S RFE G NL E VA G QM A DVII ANP S GI NIK G GG FIN ANKAIF TT GK P QLNADGSIKQFTVDQGRI TV 234
Cdd:pfam05860 58 - TD A QN ILN R V TGGNP S QIQ G YI E AN G TR A NLFL ANP N GI IFG G NA FIN IGGSFL TT TA P SIKFGDGTEFNPSSVPLG TV 136
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 235 S ANPNSK FG lggnn NDAN Y V DL Y ARA LELSAELR A KNDIQVI AG A N N V S - ADLQEVTAKTGTGT A PAL A V D VKA LG G MYA 313
Cdd:pfam05860 137 S VPGGGQ FG ----- SNGG Y I DL I ARA VDNNGQVP A GKTLALV AG N N D V D g GAPGGRVEIGSVTA A GTV A I D AAS LG S MYA 211
250 260 270
....*....|....*....|....*....|....*...
gi 446961779 314 N NI Y L M GT E KG L GV TN A - G T L Q A VN - N L VI TSAG K I EN 349
Cdd:pfam05860 212 G NI R L I GT D KG A GV RL A n G S L V A SG g D L NG TSAG D I QL 249
DUF637
pfam04830 Possible hemagglutinin (DUF637); This family represents a conserved region found in a ...
1470-1625
4.53e-27
Possible hemagglutinin (DUF637); This family represents a conserved region found in a bacterial protein which may be a hemagglutinin or hemolysin.
Pssm-ID: 428148
Cd Length: 166
Bit Score: 109.43
E-value: 4.53e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1470 AA VT SLA A QA SIG LINN G GD I GKTLK EM GS K DS I K N LA ASV VTAG L LS QVG -------------- TA L NLKPDSTLLSD R 1535
Cdd:pfam04830 2 AA MA SLA S QA AVS LINN K GD L GKTLK DL GS S DS V K S LA TAM VTAG A LS GID laslagvqdvnkna VP L LDNGTWSGVAQ R 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1536 LA N N F A S SV G S TL V Q TAINGG DLG DNL QV ALL AGLAGALQG E L A SQ IG TSLD kvdpn IFEYTIHK IAHA V VGCA T A A A TK 1615
Cdd:pfam04830 82 LA A N L A Q SV I S AG V N TAINGG SFK DNL TT ALL SAIVSQFNA E G A NL IG DNGE ----- QLGLPAKA IAHA A VGCA S A E A SG 156
170
....*....|
gi 446961779 1616 QS C EA GAIGA 1625
Cdd:pfam04830 157 GD C AG GAIGA 166
Haemagg_act
smart00912 haemagglutination activity domain; This domain is suggested to be a carbohydrate- dependent ...
103-219
1.41e-18
haemagglutination activity domain; This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.
Pssm-ID: 214908 [Multi-domain]
Cd Length: 119
Bit Score: 83.10
E-value: 1.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 103 V PVVNI Q TP kng I SHN I Y KQ F D V LAE G -- AV LNN SRQ g ATTKT VGA VAANP F LAT G E A R VILN E V NSSAA S RFE G N LEVA 180
Cdd:smart00912 4 L PVVNI V TP --- N SHN Q Y SS F N V GTR G vn QI LNN AIN - WQSFS VGA GETVN F NQP G S A S VILN R V TGGNP S QIN G A LEVA 79
90 100 110 120
....*....|....*....|....*....|....*....|
gi 446961779 181 G QM A D V IIA N PS G INIK G G G F I - N ANKAIFT T GK P QLNAD 219
Cdd:smart00912 80 G KA A G V VFL N NP G GIVF G C G A I v N VGGVTVA T TL P IIDDG 119
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
200-1109
1.21e-11
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 70.57
E-value: 1.21e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 200 GF I N A NKA I FTT G KPQL N AD GS IKQF T VDQGRITVSANPNSKF G L GG N N NDANYVDLYARALELSAELR A KNDIQVIAG A 279
Cdd:COG3210 796 ID I T A DGT I TAA G TTAI N VT GS GGTI T INTATTGLTGTGDTTS G A GG S N TTDTTTGTTSDGASGGGTAG A NSGSLAATA A 875
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 280 NNVSADLQEV T AKTGTGTAPALAVDVKALGGMYANNI ylmgtek GLG VT NA GT LQAVNNLVITS AG KIENNGTIKTTGSQ 359
Cdd:COG3210 876 SITVGSGGVA T STGTANAGTLTNLGTTTNAASGNGAV ------- LAT VT AT GT GGGGLTGGNAA AG GTGAGNGTTALSGT 948
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 360 NSVLN LS SQNNG D FTSSGAIQ S NGNIFISSDRNLALNGGKIDKLG T TLSSIFL S AKGDVSLQNGVN I QNA G V G GGIYSDS 439
Cdd:COG3210 949 QGNAG LS AASAS D GAGDTGAS S AAGSSAVGTSANSAGSTGGVIAA T GILVAGN S GTTASTTGGSGA I VAG G N G VTGTTGT 1028
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 440 LNFNLGKDSNILSQGDISLLANNN I DIQ N GKGI T SNNDLNIQSKNNLNIANSSIESKA G NVNLIS LG NTASSLLGINNTK 519
Cdd:COG3210 1029 ASATGTGTAATAGGQNGVGVNASG I SGG N AAAL T ASGTAGTTGGTAASNGGGGTAQAS G AGTTHT LG GITNGGATGTSGG 1108
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 520 LYAGKDFNIKGAKNIKLNSSIVQENSNNINLYADNDIEIGND VS P V SLKTQGTINIAAKNNLILR T D T SLLTKKNIDVQT 599
Cdd:COG3210 1109 TTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVA VS A V AGGASSASAGDTTAVAAAT T T T TGSAINGGADSA 1188
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 600 DIGNLYAKS L NVSS S E G KVSILGNGNVNLE T QNDGWYTLK N RINAKNGIILGSKGEN A ITKINTVDLKS T DGNVLLL S G G 679
Cdd:COG3210 1189 ATEGTAGTD L KGGD S T G GSTTTIGTTNVTT T TTLTASDTG N TTATGGSSAGQTGSFV A AGSASGTGDAT T GATAGAV S N G 1268
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 680 DLTLDGN N GYT T GMKAA V AS G FIN A KDVTLWSK T GVLDISSGVINASN G GISIR A GNN A QVHDIDLNSTKNIEINSDKDL 759
Cdd:COG3210 1269 ATSTVAG N AGA T ATGST V DI G STS A TSAGGSLD T TGNTAGANGATVGT G IGGTT A TGT A VAAVNSGGVNAGGGTINTTAA 1348
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 760 ILERTNTRANQHI A LSSKGNIN A yq NYILDAK G VLSAISNGSIDGQGY G GAVIVEANQLSNNGIDFRAT G SELLQLDTKL 839
Cdd:COG3210 1349 NTGLNGGNGATDS A AGAGSGGA A -- GSLAATA G AGTVLTGAGNNTGAE G TNAGRDGGVTTSGTGVGNNG G VSGTTVAGTT 1426
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 840 KNINGNLSIQLNKDFVIKPTHGHDTITLVAENDIDVR S KQ GA IRIEGE N FAPNLNEA G FVGIISRK G GLSLEGTSVDIKG 919
Cdd:COG3210 1427 GSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNA S SL GA GGSTAG N AVGGAVIG G TTTGGNGA G VAGATASNGGTST 1506
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 920 TKINVQKDINIVST K GD L VIDGIADKVNG V SKKKDLINSQDDQEKKNFIANTIT GV ENFNSELS T NTGNINISSKKGVSI 999
Cdd:COG3210 1507 GAGGTAGGTTAEVA K AS L EGGEGTYGGSS V AEAGTGGGILGAVSGAGSEGGAAG GV TGSVGVGG T DGAGGDTGGADDTGA 1586
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1000 TGANIDAKQGIVNIQ A Q G VLNGKYRA T AKKE GT TAKELSASIIIDGNLDVYEKGNETDQNYSYREYVNP T NINGNK G VNI 1079
Cdd:COG3210 1587 QAPTAGNTATLTLSL A E G TNAEYGGT T NVTS GT AGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGT T LSGAVN G AGN 1666
890 900 910
....*....|....*....|....*....|
gi 446961779 1080 RAIGKTVNDN L VLQ G VGINS A Q G D V NIEAD 1109
Cdd:COG3210 1667 GWAVDLTDAT L AGL G GATTA A A G N V ATGDT 1696
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
75-1224
2.67e-11
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 69.41
E-value: 2.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 75 Y A DIVADS A ANAANR A VIAAGK N SAGTTVPVVNIQTPKNGISHNIYKQFDVL A EGAVLNNSRQ G ATTKTVG A VAANPF L A 154
Cdd:COG3210 556 T A ASGSNT A NTLGVL A ATGGTS N ATTAGNSTSATGGTGTNSGGTVLSIGTGS A GATGTITLGA G TSGAGAN A TGGGAG L T 635
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 155 TGEARVI L NEVN S SAASRFEG N LEVAGQMADVIIANPSGINIKGG G FINANKAIFTTGKPQLNADGSIKQF T VDQ G R ITV 234
Cdd:COG3210 636 GSAVGAA L SGTG S GTTGTASA N GSNTTGVNTAGGTGGGTTGTVTS G ATGGTTGTTLNAATGGTLNNAGNTL T IST G S ITV 715
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 235 S anpnskf G LG G NNND AN YVDLYARA L ELS A E L RAKNDIQVIA G AN - NV S AD L QEV T AKT GT GTAP A L A VDVKAL G GMYA 313
Cdd:COG3210 716 T ------- G QI G ALAN AN GDTVTFGN L GTG A T L TLNAGVTITS G NA g TL S IG L TAN T TAS GT TLTL A N A NGNTSA G ATLD 788
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 314 N N iylm G T E KGLGV T NA GT LQ A VNNLV I TSA G kie NN GTI KTTGSQNSVLNLSSQNN G DFT S SGAIQSN G NIFISSDRNL 393
Cdd:COG3210 789 N A ---- G A E ISIDI T AD GT IT A AGTTA I NVT G --- SG GTI TINTATTGLTGTGDTTS G AGG S NTTDTTT G TTSDGASGGG 861
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 394 ALNGGKIDKLG T TL S SIFL S AKGDV S LQNGVNIQNAGV G GGIYSD S L N FNLGKDSNILSQ G DIS L LAN N NIDIQN G K G IT 473
Cdd:COG3210 862 TAGANSGSLAA T AA S ITVG S GGVAT S TGTANAGTLTNL G TTTNAA S G N GAVLATVTATGT G GGG L TGG N AAAGGT G A G NG 941
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 474 SNNDLNI Q SKNN L NI A NS S IESKAGNVNLISLGNTASSLLGINNTKLYAGKDFN I KG A K N IKLNS S IVQENSNNINLYAD 553
Cdd:COG3210 942 TTALSGT Q GNAG L SA A SA S DGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATG I LV A G N SGTTA S TTGGSGAIVAGGNG 1021
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 554 NDIEI G NDVSPVSLKTQGTINIAAKNNLILRTDTSLLTKKNIDVQTDIGNLY A K S LNVSSSE ----- G KVSI LG NGNVNL 628
Cdd:COG3210 1022 VTGTT G TASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGT A A S NGGGGTA qasga G TTHT LG GITNGG 1101
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 629 E T QND G WY T LKNRINAKNGIILGSKGENAI T KINTVDLKSTDGNVL L LSGGDLTLDGNNGYTTGMK A AV A SGFINAKDVT 708
Cdd:COG3210 1102 A T GTS G GT T TSTGGVTASKVGGTTTVGATG T STASTEAAGAGTLTG L VAVSAVAGGASSASAGDTT A VA A ATTTTTGSAI 1181
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 709 LWSKTGVLDISSGVINASN G GISIRAGNNAQVHDIDLNS T KNIEINSDKDLILERTNTRANQHI A LS S KGNINAYQNYIL 788
Cdd:COG3210 1182 NGGADSAATEGTAGTDLKG G DSTGGSTTTIGTTNVTTTT T LTASDTGNTTATGGSSAGQTGSFV A AG S ASGTGDATTGAT 1261
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 789 DAKGVLS A I S NGSIDGQGYGGAVI V EANQL S NNGIDFRATGSELLQLDTKLKNIN G NLSIQLNKDF V IKPTH G HDTITLV 868
Cdd:COG3210 1262 AGAVSNG A T S TVAGNAGATATGST V DIGST S ATSAGGSLDTTGNTAGANGATVGT G IGGTTATGTA V AAVNS G GVNAGGG 1341
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 869 AE N DIDVRSKQGAIRIEGENF A PNLNEAGFVGIISRK G GLSLEGTSVDIK G TKINVQKDINI V S T K G DL V IDGIADKVNG 948
Cdd:COG3210 1342 TI N TTAANTGLNGGNGATDSA A GAGSGGAAGSLAATA G AGTVLTGAGNNT G AEGTNAGRDGG V T T S G TG V GNNGGVSGTT 1421
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 949 V SKKKDLINSQDDQEKK N FIANTIT G VENF N SEL S TNTGNINI S SKK G V S IT G ANIDAKQGIVNIQAQGVLNGKYRATAK 1028
Cdd:COG3210 1422 V AGTTGSSATTGTGGTG N TTGTSVA G AGGG N ADA S AINTGNAS S LGA G G S TA G NAVGGAVIGGTTTGGNGAGVAGATASN 1501
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1029 KEGT T AKELS A SIIIDGNLDVYEK G N E TDQNY S YREYVNPTNINGNKGVNIRAI G KTVNDNLVLQ GVG INSAQ G DVNIE A 1108
Cdd:COG3210 1502 GGTS T GAGGT A GGTTAEVAKASLE G G E GTYGG S SVAEAGTGGGILGAVSGAGSE G GAAGGVTGSV GVG GTDGA G GDTGG A 1581
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1109 D KSILFDTALETLYDRSTKTETKRSWYGKKK T TT T TTIGDVVTPASVDIYGKNINVISQFKNP L R A D G TRDPALNT S VDI 1188
Cdd:COG3210 1582 D DTGAQAPTAGNTATLTLSLAEGTNAEYGGT T NV T SGTAGNAGATGANSNTVVTTNGGEGVLA L V A G G NTTNGTTL S GAV 1661
1130 1140 1150
....*....|....*....|....*....|....*.
gi 446961779 1189 YS A RFNANGGKISIRSG G DLNFL T V AA V N NSNVNQV 1224
Cdd:COG3210 1662 NG A GNGWAVDLTDATLA G LGGAT T A AA G N VATGDTA 1697
adhes_NPXG
TIGR01901 filamentous hemagglutinin family N-terminal domain; This model represents a conserved domain ...
117-215
6.26e-10
filamentous hemagglutinin family N-terminal domain; This model represents a conserved domain found near the N-terminus of a number of large, repetitive bacterial proteins, including many proteins of over 2500 amino acids. Members generally have a signal sequence, then an intervening region, then the region described by this model. Following this region, proteins typically have regions rich in repeats but may show no homology between the repeats of one member and the repeats of another. A number of the members of this family have been designated adhesins, filamentous haemagglutinins, heme/hemopexin-binding protein, etc.
Pssm-ID: 273865
Cd Length: 79
Bit Score: 57.29
E-value: 6.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 117 H N IYK QF D V LAE G A V LN N S rqgattktvgavaanpfla TGE A RV ILN E V NSSA AS RFE G N L E V A G Q m A D V IIA NP S GI NI 196
Cdd:TIGR01901 1 F N NWQ QF N V GQG G T V TF N Q ------------------- PPA A SN ILN R V TGGS AS QIQ G L L Q V N G K - A N V FLI NP N GI IF 60
90
....*....|....*....
gi 446961779 197 K GG GF IN ANKAIFT T GKPQ 215
Cdd:TIGR01901 61 G GG AQ IN VGGLVAS T TAIS 79
ESPR
pfam13018 Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for ...
1-37
6.67e-10
Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for Extended Signal Peptide Region. It is present at the N-terminus of the signal peptides of proteins belonging to the Type V secretion systems, including the autotransporters (T5aSS), TpsA exoproteins of the two-partner system (T5bSS) and trimeric autotransporters (TAAs). So far, the ESPR is present only in Gram-negative bacterial proteins originating from the classes Beta- and Gamma-proteobacteria. ESPR severely impairs inner membrane translocation, suggesting that it adopts a particular conformation or it interacts with a cytoplasmic or inner membrane co-factor, prior to exportation. Deletion of ESPR causes mis-folding of the TAAs passenger domain in the periplasm, substantially impairing its translocation across the outer membrane.
Pssm-ID: 463773 [Multi-domain]
Cd Length: 50
Bit Score: 56.00
E-value: 6.67e-10
10 20 30
....*....|....*....|....*....|....*..
gi 446961779 1 MNK n L YR I I F N K AR NMFMA V A E NVR S QS K AAGQ SS S S 37
Cdd:pfam13018 1 MNK - I YR V I W N R AR GAWVV V S E LAK S KG K SSSS SS G S 36
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
72-1696
1.99e-08
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 59.78
E-value: 1.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 72 A PVYADIV A DSAANA A NR A VI A AGKNSAG T TVPVVNIQTPK N GISHNIYKQFDVL A EGAVLNNSRQGAT T K TV GAVAANP 151
Cdd:COG3210 68 A GGVGNTS A STGGIG A AA A NT A GTLETGL T SNIGGGSVNGS N STGNGTLTTTAAS A TTGNNTGGTTTSS T N TV TTLGGTT 147
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 152 FLA T GEARVILNEVNSSAA S RFEG N LEVAGQMADVIIANPSGINIKGG G FIN A NKAIFTTGKPQLNADGSIKQFTVDQGR 231
Cdd:COG3210 148 TGN T VLSTSGAGNNTNTNN S SSGT N IGNSIPTTGGSLNVVAANPTGVT G VGG A LINATAGVLANAGGGTAGGVASANSTL 227
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 232 ITVSANPNSKF G LGGNNNDANYVDLY A RALELSAELRAK N DIQVIA G ANNVSADLQEVTAKTGTGTAPALAV dvk ALGGM 311
Cdd:COG3210 228 TGGVVAAGTGA G VISTGGTDISSLSV A AGAGTGGAGGTG N AGNTTI G TTVTGTNATGSNTAGASSGDTTTNG --- TSSVT 304
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 312 Y A NNIYLM G TEKGL G V T NAG T LQAVNNLVI T S A GKIENNGTIK T T G SQNSVLNLSSQNNGDFTSS G AIQSN G NIFIS S DR 391
Cdd:COG3210 305 G A GGTGVL G GGTAA G I T TTN T VGGNGDGNN T T A NSGAGLVSGG T G G NNGTTGTGAGSGLTGTGNG G GLTTA G AGTVA S TV 384
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 392 NL A LNGGKIDKLG T T L S S IF L SAKGDVSLQN G VNIQNAGV G GGI ysd SLNFNLGKDSNILSQ G D I SL L ANNNIDIQN G KG 471
Cdd:COG3210 385 GT A TASTGNASST T V L G S GS L ATGNTGTTIA G NGGSANAG G FTT --- TGGVLGITGNGTVTG G T I GG L TGSGTTNGA G LS 461
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 472 ITSNNDLNIQSK N NLNIAN S SIESKA G NVNLISLGN T A S SLL G INNTKLYA G KDFNIK G AKNIKLNS S IVQENSNNINLY 551
Cdd:COG3210 462 GNTDVSGTGTVT N SAGNTT S ATTLAG G GIGTVTTNA T I S NNA G GDANGIAT G LTGITA G GGGGGNAT S GGTGGDGTTLSG 541
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 552 ADNDIEIGNDV S PVSLKTQGTINIAAKNNLILRTDTSLL T KK N IDVQ T DIGNLYAKSLNV S SSE G KVSIL G NGNVNLE T Q 631
Cdd:COG3210 542 SGLTTTVSGGA S GTTAASGSNTANTLGVLAATGGTSNAT T AG N STSA T GGTGTNSGGTVL S IGT G SAGAT G TITLGAG T S 621
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 632 ND G WYTLKNRINAKNGIILGSKGENAITKIN T VDLKSTDGNVLLLS GG DLTLDGNNGYTTGMKAAVASGFIN A KDV TL WS 711
Cdd:COG3210 622 GA G ANATGGGAGLTGSAVGAALSGTGSGTTG T ASANGSNTTGVNTA GG TGGGTTGTVTSGATGGTTGTTLNA A TGG TL NN 701
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 712 KTGV L D IS S G V I NAS -- N G GISIRA G NNAQVHD idlnstknie INSDKD L I L ERTN T ranqh I ALSSK G NINAYQNYILD 789
Cdd:COG3210 702 AGNT L T IS T G S I TVT gq I G ALANAN G DTVTFGN ---------- LGTGAT L T L NAGV T ----- I TSGNA G TLSIGLTANTT 766
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 790 A K G vl SAISNGSID G QGYG GA VIVE A NQLSNNG I DFRA T GSELLQLDTKLKNIN G NLS I QLNKDFVI kpth G HDTI T LV A 869
Cdd:COG3210 767 A S G -- TTLTLANAN G NTSA GA TLDN A GAEISID I TADG T ITAAGTTAINVTGSG G TIT I NTATTGLT ---- G TGDT T SG A 840
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 870 ENDIDVRSKQ G AIRIEGENFAPNLNEA G FVGIISRKGGLSLE G TSVDIKGTKINVQKDINIVSTKGDLVIDGI A DKVNGV 949
Cdd:COG3210 841 GGSNTTDTTT G TTSDGASGGGTAGANS G SLAATAASITVGSG G VATSTGTANAGTLTNLGTTTNAASGNGAVL A TVTATG 920
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 950 SKKKD L INSQDDQEKKNFIAN T ITGVENFNSELSTNTGNINISSKK G V S ITGANIDAKQGIVNIQAQ G VLNGKYRATAKK 1029
Cdd:COG3210 921 TGGGG L TGGNAAAGGTGAGNG T TALSGTQGNAGLSAASASDGAGDT G A S SAAGSSAVGTSANSAGST G GVIAATGILVAG 1000
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1030 EGT T AKELSASIIIDGNLDVYEK G NETDQNYSYREYVNPTNINGNK GVN IRA I GKTVNDN L VLQ G VGINSAQGDVNIEAD 1109
Cdd:COG3210 1001 NSG T TASTTGGSGAIVAGGNGVT G TTGTASATGTGTAATAGGQNGV GVN ASG I SGGNAAA L TAS G TAGTTGGTAASNGGG 1080
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1110 KSILFDT A LE T LYDRSTKTETKRSWY G KKK T T T TTTIGDV V TPASVDIYGKNINVISQFKNPLRAD G TRDPALNTSVDIY 1189
Cdd:COG3210 1081 GTAQASG A GT T HTLGGITNGGATGTS G GTT T S T GGVTASK V GGTTTVGATGTSTASTEAAGAGTLT G LVAVSAVAGGASS 1160
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1190 SARFNANGGKISIRSGGDLNFLTV A AVNNSNVNQV k KSSWL G INL G T S K T NATRNQT T EIPAKLKA D YIG T KSGYDTRLE 1269
Cdd:COG3210 1161 ASAGDTTAVAAATTTTTGSAINGG A DSAATEGTAG - TDLKG G DST G G S T T TIGTTNV T TTTTLTAS D TGN T TATGGSSAG 1239
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1270 G T EFTYLKSATIEA G GTI T LVP A KNLVEESLNRKKNSVVWQSMQDKGS I TE T AQLPNFNGPQPPVFN A AGGLSVQVPISE 1349
Cdd:COG3210 1240 Q T GSFVAAGSASGT G DAT T GAT A GAVSNGATSTVAGNAGATATGSTVD I GS T SATSAGGSLDTTGNT A GANGATVGTGIG 1319
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1350 KDVNKVELRD A ILKLANQP G SAYLKDLVNRKDIDWQTVLLTQKDWDYKSQGLTAAG A AIIVII V TIATMGSGT A AAAG A A 1429
Cdd:COG3210 1320 GTTATGTAVA A VNSGGVNA G GGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLA A TAGAGT V LTGAGNNTG A EGTN A G 1399
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1430 GGTAASGTTV G L G ASMLGTAGVTTTAA G AIVPSTL G AMA N AAV TS L A AQASIGLINNGGDI G KTLKEMGSKDSIK N LAAS 1509
Cdd:COG3210 1400 RDGGVTTSGT G V G NNGGVSGTTVAGTT G SSATTGT G GTG N TTG TS V A GAGGGNADASAINT G NASSLGAGGSTAG N AVGG 1479
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1510 V V TA G LLSQVGT A LNLKPDSTLLSDRLANNFASSVGSTL V QT A ING G DL G DNLQVALLAGLA G ALQGELA S QI G TSLDKV 1589
Cdd:COG3210 1480 A V IG G TTTGGNG A GVAGATASNGGTSTGAGGTAGGTTAE V AK A SLE G GE G TYGGSSVAEAGT G GGILGAV S GA G SEGGAA 1559
1530 1540 1550 1560 1570 1580 1590 1600
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1590 DPNIFEYTIHKIAH A VVGCAT A AA T KQSCEAGAIG A GVGEIV AE LMIPAGKTALDL T DAERTKIKD T SKLIAGTTAAFA G 1669
Cdd:COG3210 1560 GGVTGSVGVGGTDG A GGDTGG A DD T GAQAPTAGNT A TLTLSL AE GTNAEYGGTTNV T SGTAGNAGA T GANSNTVVTTNG G 1639
1610 1620
....*....|....*....|....*..
gi 446961779 1670 YD V NTAANSA N IAVENNTL G KLATTAG 1696
Cdd:COG3210 1640 EG V LALVAGG N TTNGTTLS G AVNGAGN 1666
AidA
COG3468 Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
277-686
1.03e-07
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain]
Cd Length: 846
Bit Score: 57.26
E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 277 A G ANNVSAD L QEVTAKT G T G TAPALAVDVKALG G MYANNIYLM G TEK G LGVT N A G TLQAVNNLVITS AG KIENNGTIKTT 356
Cdd:COG3468 3 S G GGGGATG L GGGGTGG G G G LGGTGGGNAGLGI G NGGGGGAAS G SGA G GVAG N G G GGGGGAGGGGGG AG SGGGLAGAGSG 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 357 G SQNSVLNLSSQ N N G DFTSS G AIQSN G NIFISSDRNLALN GG KIDKL G TTLS S IFLSAK G DVSLQNGVNIQN A GV GGG IY 436
Cdd:COG3468 83 G TGGNSTGGGGG N S G TGGTG G GGGGG G SGNGGGGGGGGGG GG TGGGG G GGTG S AGGGGG G GGGGTGVGGTGA A AA GGG TG 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 437 S DSLNFNL G KDSNILSQ G DISLLANNNIDIQNGK G ITSNNDLNIQSKNNLNIANSSIESKAGNVNLI S L GNT ASSLL G IN 516
Cdd:COG3468 163 S GGGGSGG G GGAGGGGG G GAGGSGGAGSTGSGAG G GGGGSGGGGGAAGTGGGGGGGGGAGGATGGAG S G GNT GGGVG G GG 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 517 NTKLYA G KDFNIK G AKNIKLNSSIVQENSNNINLYADNDIEIGNDVSPV S LKT ---------------- Q G TINIAAK N N 580
Cdd:COG3468 243 GSAGGT G GGGLTG G GAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGA S GTG gggtastggggggggg N G GGGGGGS N A 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 581 LILRTDTSLLTKKNIDVQ T DIGNLYAKSLNVSSSEGKVSIL G N G NVNLETQND G WYTLKNRI N AKNGIILGSKGENAITK 660
Cdd:COG3468 323 GGGSGGGGGGGGGGGGGG T TLNGAGSAGGGTGAALAGTGGS G S G GGGGGGSGG G GGAGGGGA N TGSDGVGTGLTTGGTGN 402
410 420
....*....|....*....|....*.
gi 446961779 661 INTVDLKSTD G NV L L L S GG D LT LD GN 686
Cdd:COG3468 403 NGGGGVGGGG G GG L T L T GG T LT VN GN 428
HNHc
cd00085 HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic ...
1838-1889
2.02e-07
HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.
Pssm-ID: 238038 [Multi-domain]
Cd Length: 57
Bit Score: 49.39
E-value: 2.02e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 446961779 1838 R GKFIQEWYKRG Y ETPR GG WSEYDIH HI K P REF GG T N EFW NL TPVQ RK T H QQ 1889
Cdd:cd00085 4 R LVLLARDGLCP Y CGKP GG TEGLEVD HI I P LSD GG N N DLD NL VLLC RK C H RK 55
AidA
COG3468 Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
428-847
2.68e-06
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain]
Cd Length: 846
Bit Score: 52.64
E-value: 2.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 428 NAGV G G G IYSDSLNFN LG KDSNILSQGD I SLLANNNIDIQN G K G ITSN N DLNIQSKNNLNIANSSIESKAGNVNLISL G N 507
Cdd:COG3468 7 GGAT G L G GGGTGGGGG LG GTGGGNAGLG I GNGGGGGAASGS G A G GVAG N GGGGGGGAGGGGGGAGSGGGLAGAGSGGT G G 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 508 TASSLL G I N NTKLYA G KDFNIK G AK N IKLNSSIVQENSNNINLYADNDIEI G NDVSPVSLKTQ G TINI AA KNNLILRTDT 587
Cdd:COG3468 87 NSTGGG G G N SGTGGT G GGGGGG G SG N GGGGGGGGGGGGTGGGGGGGTGSAG G GGGGGGGGTGV G GTGA AA AGGGTGSGGG 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 588 SLLTKKNIDVQTDI G NLYAKSLNVSS S EGKVSIL G N G NVNLETQND G WYTLKNRINAKN G IILGSKGENAITKINTVDLK 667
Cdd:COG3468 167 GSGGGGGAGGGGGG G AGGSGGAGSTG S GAGGGGG G S G GGGGAAGTG G GGGGGGGAGGAT G GAGSGGNTGGGVGGGGGSAG 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 668 S T D G NV L LLS G GDL T LD G NN G YT TG MKAAVAS G FINAKDVTLWSKT G VLDISSGVINASN GG ISIRA G NNAQVHDIDLN S 747
Cdd:COG3468 247 G T G G GG L TGG G AAG T GG G GG G TG TG SGGGGGG G ANGGGSGGGGGAS G TGGGGTASTGGGG GG GGGNG G GGGGGSNAGGG S 326
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 748 TKNIEINSDKDLILERT N TRANQHIALSSKGNINAYQNYILDAK G VLSAISNGSID G QGY G GAVIVEANQLSNN G IDFRA 827
Cdd:COG3468 327 GGGGGGGGGGGGGGTTL N GAGSAGGGTGAALAGTGGSGSGGGGG G GSGGGGGAGGG G ANT G SDGVGTGLTTGGT G NNGGG 406
410 420
....*....|....*....|....
gi 446961779 828 TGSELLQLDTK L KN ---- I NGN LS 847
Cdd:COG3468 407 GVGGGGGGGLT L TG gtlt V NGN YT 430
AidA
COG3468 Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
371-806
5.73e-06
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain]
Cd Length: 846
Bit Score: 51.49
E-value: 5.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 371 GDFTSS G AIQSN G NIFISSDRN L ALN GG KIDK LG TTLSSIFLS A K G DVSLQNGV N IQNA G V G G G IYSDSLNFN lgkds NI 450
Cdd:COG3468 1 TASGGG G GATGL G GGGTGGGGG L GGT GG GNAG LG IGNGGGGGA A S G SGAGGVAG N GGGG G G G A G GGGGGAGSG ----- GG 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 451 L SQGDISLLAN N NIDIQN G KGI T SNNDLNIQSKNNL N IANSSIESKA G NVNLISL G N T A S SLL G INNTKLYA G KDFNIKG 530
Cdd:COG3468 76 L AGAGSGGTGG N STGGGG G NSG T GGTGGGGGGGGSG N GGGGGGGGGG G GTGGGGG G G T G S AGG G GGGGGGGT G VGGTGAA 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 531 A KNIKLN S SIVQENSNNINLYADNDIEI G NDVSPVSLKTQ G TINIAA k NNLILRTD T SLLTKKNIDVQTDI G NLYAKSLN 610
Cdd:COG3468 156 A AGGGTG S GGGGSGGGGGAGGGGGGGAG G SGGAGSTGSGA G GGGGGS - GGGGGAAG T GGGGGGGGGAGGAT G GAGSGGNT 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 611 VSSSE G KVSIL G NGNVNLE T QNDGWY T LKNRINAKN G IIL G SK G ENAITKINTVDLK S TD G NVLLL S G G DLTLD G NNGYT 690
Cdd:COG3468 235 GGGVG G GGGSA G GTGGGGL T GGGAAG T GGGGGGTGT G SGG G GG G GANGGGSGGGGGA S GT G GGGTA S T G GGGGG G GGNGG 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 691 T G MKAAV A S G FINAKDVTLWSKT G VLDISS G VIN A SN G GISIR AG NNAQVHDIDLNSTKNIEINSDKDLILERTNTRANQ 770
Cdd:COG3468 315 G G GGGSN A G G GSGGGGGGGGGGG G GGTTLN G AGS A GG G TGAAL AG TGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTG 394
410 420 430
....*....|....*....|....*....|....*....
gi 446961779 771 HIALSSKG N INAYQNYILDAKGV L SAIS --- NG SID G QG 806
Cdd:COG3468 395 LTTGGTGN N GGGGVGGGGGGGLT L TGGT ltv NG NYT G NN 433
COG4625
COG4625 Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
293-794
4.42e-05
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain]
Cd Length: 900
Bit Score: 48.62
E-value: 4.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 293 T G T G TAPALAVDVKAL GG MY A NNIYLM G TEK G L G VTNA G TLQAVNNLVITSA G KIENN G TIKTT G SQNSVLNLSSQNN G D 372
Cdd:COG4625 2 G G G G GGGGGGGGGGGT GG GG A GGGGGA G GGA G G G GAGG G GGGGGGGGGAGGG G GGGGT G GGGGG G GGGGGGGAGGGGG G G 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 373 FTSS G AIQSN G NIFISSDRNLALN GG KIDKL G TTLS S IFLSAK G DVSLQN G VNIQNA G V GGG IYSDSLNFNL G KDSNILS 452
Cdd:COG4625 82 GGGG G GGGTG G VGGGGGGGGGGGG GG GGGGG G GGGG S AGGGGG G AGGAGG G GGGGAG G G GGG GGGGGAGGGG G GGAGGAG 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 453 Q G DISLLANNNIDIQN G K G ITSNNDLNIQSK N NLNIANSSIESKA G NVNLISL G NTASSLL G INNTKLYA G KDFNIK G AK 532
Cdd:COG4625 162 G G GGGGGGGGGGGGGG G G G GGGGGGGGGGGG N GGGGGGGGGGGGG G GGGGGGA G GGGGGGG G GGGGGGGG G GGGGGG G GG 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 533 NIKLNSSIVQENSNNI N LYADNDIEI G NDVSPV S LKTQ G TINIAAKNNLILRTDTSLLTKKNIDVQTDI G NLYAKSLNVS 612
Cdd:COG4625 242 GGGGGGAGGGGGGGGG N GGGGGAGGG G GGGGGG S GGGG G GGGGGGSGGGGGGGGGGGGGGGGGGGGGGG G GGGGGGGGGG 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 613 SSE G KVSIL G N G NVNLETQNDGWYTLKNRINAKN G IIL G SKGENAITKINTVDLK S TD G NVLLLS G GDLTLD G NN G YTT G 692
Cdd:COG4625 322 GGG G GGGGG G G G AGGGGGSGGAGAGGGGAGGGGA G GGG G GGTGGGGGGGGGGGGG S GG G GAGGGG G SGGGGG G GA G GGG G 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 693 MKA A VAS G FIN A KDVTLWSKT G VLDISS G VINASN G GISIRA G NNAQVHDIDLNSTKNIEINSDKDLILERTN T - RANQH 771
Cdd:COG4625 402 GGG A GGT G GGG A GGGGGAAGG G GGGTGA G GGGGGG G TGAGGG G ATGGGGGGGGGAGGSGGGAGAGGGSGSGAG T l TLTGN 481
490 500
....*....|....*....|...
gi 446961779 772 IALSSKGNI N AYQ NY ILD A KGV L 794
Cdd:COG4625 482 NTYTGTTTV N GGG NY TQS A GST L 504
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
273-1817
4.51e-05
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 48.61
E-value: 4.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 273 IQVIA G ANNV S ADLQEVT A KTGT GT APALAVDVKAL G GMYAN N IYLM GT ek GLGVTNAG T LQAVNNLVI TS AGKIENNGT 352
Cdd:COG3210 67 TAGGV G NTSA S TGGIGAA A ANTA GT LETGLTSNIGG G SVNGS N STGN GT -- LTTTAASA T TGNNTGGTT TS STNTVTTLG 144
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 353 IK TTG SQNSVLNLSSQ N NGDFT SS GAIQSNGN I FISSDRNLALNGGKIDKL G TTLSS I FLS A KGDVSLQN G VNIQN A GVG 432
Cdd:COG3210 145 GT TTG NTVLSTSGAGN N TNTNN SS SGTNIGNS I PTTGGSLNVVAANPTGVT G VGGAL I NAT A GVLANAGG G TAGGV A SAN 224
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 433 GGIYSDSLNFNL G KDSNILSQG DIS L L ANNNIDIQN G K G I T S N NDLNIQSKNNLNIANSSIESKAGNVNLISLGN T A S SL 512
Cdd:COG3210 225 STLTGGVVAAGT G AGVISTGGT DIS S L SVAAGAGTG G A G G T G N AGNTTIGTTVTGTNATGSNTAGASSGDTTTNG T S S VT 304
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 513 LGINNTK L YA G KDFN I KGAKNIKL N SSIVQENS N NINLYADNDIEIG N DVSPVSLKTQG T INIAAKNNLILRTD T SLL T K 592
Cdd:COG3210 305 GAGGTGV L GG G TAAG I TTTNTVGG N GDGNNTTA N SGAGLVSGGTGGN N GTTGTGAGSGL T GTGNGGGLTTAGAG T VAS T V 384
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 593 KNIDVQ T DIGNLYAKSLNV S SSE G KVSILGN GN VNLETQNDGWY T LKNRINAK NG IIL G SKGENAIT k IN T VDLKSTD GN 672
Cdd:COG3210 385 GTATAS T GNASSTTVLGSG S LAT G NTGTTIA GN GGSANAGGFTT T GGVLGITG NG TVT G GTIGGLTG - SG T TNGAGLS GN 463
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 673 VLLLSG G DL T LDGN N GYTTGMK A AVAS G FINAKDVTLWSKT G VLDISSGVINASNG G ISIRAGNNAQVHDI D LNSTKNIE 752
Cdd:COG3210 464 TDVSGT G TV T NSAG N TTSATTL A GGGI G TVTTNATISNNAG G DANGIATGLTGITA G GGGGGNATSGGTGG D GTTLSGSG 543
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 753 INSDKDLILER T NTRANQHI A LSSKGNINAYQNYILDAK G VLSAISN G SIDGQ G YGGAV I VEANQLSNNG I DFR A TG S EL 832
Cdd:COG3210 544 LTTTVSGGASG T TAASGSNT A NTLGVLAATGGTSNATTA G NSTSATG G TGTNS G GTVLS I GTGSAGATGT I TLG A GT S GA 623
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 833 LQLD T KLKNINGNLSIQLNKDFVIKP T H G HDTITLVAENDIDVRSKQ G AIRIEGENFAPNLNEA G FVGIISRK G G L SLE G 912
Cdd:COG3210 624 GANA T GGGAGLTGSAVGAALSGTGSG T T G TASANGSNTTGVNTAGGT G GGTTGTVTSGATGGTT G TTLNAATG G T L NNA G 703
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 913 TSVD I KGTK I N V QKD I - NIVSTK GD L V I dg IADKVN G VSKKKDLINSQDDQEKKNFIANTITGVENFNSE L STNTG N I N I 991
Cdd:COG3210 704 NTLT I STGS I T V TGQ I g ALANAN GD T V T -- FGNLGT G ATLTLNAGVTITSGNAGTLSIGLTANTTASGTT L TLANA N G N T 781
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 992 S SKKGVSIT GA N I D akq GIVNIQAQGVLN G KYRATAKKE G T T AKELS A SIIID G NL D VYEKGNETDQNYSYREYVNPTNI 1071
Cdd:COG3210 782 S AGATLDNA GA E I S --- IDITADGTITAA G TTAINVTGS G G T ITINT A TTGLT G TG D TTSGAGGSNTTDTTTGTTSDGAS 858
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1072 N G NKGVNIRAIGKTVNDNLVLQGV G INSAQ G DV N IEADKSILFD T ALETLYDRSTK T E T KRSWY G KKK T TTTTTI G DVVT 1151
Cdd:COG3210 859 G G GTAGANSGSLAATAASITVGSG G VATST G TA N AGTLTNLGTT T NAASGNGAVLA T V T ATGTG G GGL T GGNAAA G GTGA 938
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1152 PASVDIYGKNINVISQFKNPLRADGTRDP A LNTSVDIYSARFNANG G KISIRSGGDLNFLTVAAVNNSNVNQVKKSSWL G 1231
Cdd:COG3210 939 GNGTTALSGTQGNAGLSAASASDGAGDTG A SSAAGSSAVGTSANSA G STGGVIAATGILVAGNSGTTASTTGGSGAIVA G 1018
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1232 I N LG T SK T NATRNQT T EIP A KLKADYIGTKSGYDTRLEGTEFTYLKSATIEA GGT ITLVPAKNLVEE S LN rkk NSVVWQS 1311
Cdd:COG3210 1019 G N GV T GT T GTASATG T GTA A TAGGQNGVGVNASGISGGNAAALTASGTAGTT GGT AASNGGGGTAQA S GA --- GTTHTLG 1095
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1312 MQDK G SI T E T AQLPNFNGPQPPVFNAA G GLS V QVPISEKDVNKVELRDAILK L ANQPGS A YLKDLVNRK D IDWQTVLL T q 1391
Cdd:COG3210 1096 GITN G GA T G T SGGTTTSTGGVTASKVG G TTT V GATGTSTASTEAAGAGTLTG L VAVSAV A GGASSASAG D TTAVAAAT T - 1174
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1392 kdwdyksq GL T AAGAAIIVIIVTIATMGSGTAAAAGAA GG TAASGT T VGLGASMLG TA GV T TTAAGAIVP S TLGAMANA A 1471
Cdd:COG3210 1175 -------- TT T GSAINGGADSAATEGTAGTDLKGGDST GG STTTIG T TNVTTTTTL TA SD T GNTTATGGS S AGQTGSFV A 1246
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1472 VT S LAAQASIGLINNG G DIGKTLKEMGSKDSIKNLAA S V V TA G LL S QVGTALN L KPDSTLLSDRL A NNFASSV G S T LVQ T 1551
Cdd:COG3210 1247 AG S ASGTGDATTGATA G AVSNGATSTVAGNAGATATG S T V DI G ST S ATSAGGS L DTTGNTAGANG A TVGTGIG G T T ATG T 1326
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1552 A INGGDL G DNLQVALLAGLAG A LQ G ELASQIG T SLDKVDPNIFEYTIHKIAHAVVGCA T A A ATKQSC E AGAI G AGV G EIV 1631
Cdd:COG3210 1327 A VAAVNS G GVNAGGGTINTTA A NT G LNGGNGA T DSAAGAGSGGAAGSLAATAGAGTVL T G A GNNTGA E GTNA G RDG G VTT 1406
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1632 AELMIPAGKTALDL T D A ER T KIKD T SKLIAGTTAAFAGYDVNTAA N SANI A VENNTLGK L ATTAGK A AYR V AKRITDMPA 1711
Cdd:COG3210 1407 SGTGVGNNGGVSGT T V A GT T GSSA T TGTGGTGNTTGTSVAGAGGG N ADAS A INTGNASS L GAGGST A GNA V GGAVIGGTT 1486
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 1712 SVRANLKPDDVIKIFKEEGVQGVIDI G DNIKTLISPTSTP G DRAFAAIDLLIGIDLKAGKNVDILKSEKNIIGKNYSAGL 1791
Cdd:COG3210 1487 TGGNGAGVAGATASNGGTSTGAGGTA G GTTAEVAKASLEG G EGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSV 1566
1530 1540
....*....|....*....|....*.
gi 446961779 1792 NREILNK AG DFYPNVP D LRTGRTISF 1817
Cdd:COG3210 1567 GVGGTDG AG GDTGGAD D TGAQAPTAG 1592
COG4625
COG4625 Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
189-758
6.37e-05
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain]
Cd Length: 900
Bit Score: 48.24
E-value: 6.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 189 ANPS G INIK GGG FINANK A IFTT G KPQLNAD G SIKQFTVDQ G r ITVS A NPNSKF G LG G NNNDANYVDLYAR A LELSAELR 268
Cdd:COG4625 4 GGGG G GGGG GGG GTGGGG A GGGG G AGGGAGG G GAGGGGGGG G - GGGG A GGGGGG G GT G GGGGGGGGGGGGG A GGGGGGGG 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 269 AKNDIQVIA G ANNVSADLQEVTAKT G T G TAPALAVDVKAL GG MYANNIYLM G TEK G L G VTNA G TLQ A VNNLVITSA G KIE 348
Cdd:COG4625 83 GGGGGGGTG G VGGGGGGGGGGGGGG G G G GGGGGGGSAGGG GG GAGGAGGGG G GGA G G G GGGG G GGG A GGGGGGGAG G AGG 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 349 NN G TIKTT G SQNSVLNLSSQNN G DFTSS G AIQSN G NIFISSDRNLALN GG KIDKL G TTLSSIFLSAK G DVSLQN G VNIQN 428
Cdd:COG4625 163 GG G GGGGG G GGGGGGGGGGGGG G GGGGG G GNGGG G GGGGGGGGGGGGG GG GAGGG G GGGGGGGGGGG G GGGGGG G GGGGG 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 429 A G V GG GIYSDSLNFNL G KDSNILSQ G DISLLANNNIDIQN G K G ITSNNDLNIQSKNNLNIANSSIESKA G NVNLISL G NT 508
Cdd:COG4625 243 G G G GG AGGGGGGGGGN G GGGGAGGG G GGGGGGSGGGGGGG G G G GSGGGGGGGGGGGGGGGGGGGGGGGG G GGGGGGG G GG 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 509 ASSLL G INNTKLYA G KDFNIK GA KNIKLNSSIVQENSNNINLYADNDIEI G NDV S PVSLKTQ G TINIAAKNNLILRTDTS 588
Cdd:COG4625 323 GGGGG G GGGGGAGG G GGSGGA GA GGGGAGGGGAGGGGGGGTGGGGGGGGG G GGG S GGGGAGG G GGSGGGGGGGAGGGGGG 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 589 LLTKKNIDVQTDI G NLY A KSLNVSSSE G KVSIL G NGNVNLETQND G WYTLKNRINAKN G IILGSK G ENAITKIN T VDLKS 668
Cdd:COG4625 403 GGAGGTGGGGAGG G GGA A GGGGGGTGA G GGGGG G GTGAGGGGATG G GGGGGGGAGGSG G GAGAGG G SGSGAGTL T LTGNN 482
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 669 T - D G NVLLLS GG DL T LDGNNGYTTGMK AA VASGFINAKDV TL WSK T G V LDISSGVINASNGGISIR A GNN A QVHDI DL NS 747
Cdd:COG4625 483 T y T G TTTVNG GG NY T QSAGSTLAVEVD AA NSDRLVVTGTA TL NGG T V V VLAGGYAPGTTYTILAVA A ALD A LAGNG DL SA 562
570
....*....|.
gi 446961779 748 TK N IEINS D KD 758
Cdd:COG4625 563 LY N ALAAL D AA 573
PT-VENN
pfam04829 Pre-toxin domain with VENN motif; This family represents a conserved region found in many ...
1644-1690
1.03e-04
Pre-toxin domain with VENN motif; This family represents a conserved region found in many bacterial porlymorphic toxins which is located before the C-terminal toxin modules.
Pssm-ID: 428147
Cd Length: 52
Bit Score: 41.56
E-value: 1.03e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 446961779 1644 D LT DA E RTKIKDT S K L I AG TTAAFA G Y --- D VN T A A NS A NI AVENN T L GK 1690
Cdd:pfam04829 3 E LT EE E KQTVSAL S T L A AG LAGGVV G G sta D AV T G A QA A KN AVENN F L SD 52
AidA
COG3468 Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
75-433
1.14e-04
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain]
Cd Length: 846
Bit Score: 47.25
E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 75 YADIVADSAANAANRAVIAA G KNSA G TTVPVVNIQTPKN G ISHNIYKQFDVLAE G AVLNNSRQ G ATTKTV GA V AA NPFLA 154
Cdd:COG3468 83 GTGGNSTGGGGGNSGTGGTG G GGGG G GSGNGGGGGGGGG G GGTGGGGGGGTGSA G GGGGGGGG G TGVGGT GA A AA GGGTG 162
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 155 T G EARVILNEVNSSAASRFE G NLEV AG QMADVIIANPS G INIK GG GFINANKAIFTT G KPQLNADGSIKQF T VDQGRITV 234
Cdd:COG3468 163 S G GGGSGGGGGAGGGGGGGA G GSGG AG STGSGAGGGGG G SGGG GG AAGTGGGGGGGG G AGGATGGAGSGGN T GGGVGGGG 242
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 235 SANPNSKF G LGGNNND A NYVDLYARALEL S AELRAKNDIQVIA G ANNVSADLQEVTAK --- T G T G TAPALAVDVKALGGM 311
Cdd:COG3468 243 GSAGGTGG G GLTGGGA A GTGGGGGGTGTG S GGGGGGGANGGGS G GGGGASGTGGGGTA stg G G G G GGGGNGGGGGGGSNA 322
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446961779 312 YANNIYLM G TEK G L G VTNAGTLQ A VNNLVI T S A GKIENN G TIKTT G SQNSVLNLSSQNN G DFTSSGAIQSN G NIFISSDR 391
Cdd:COG3468 323 GGGSGGGG G GGG G G G GGGTTLNG A GSAGGG T G A ALAGTG G SGSGG G GGGGSGGGGGAGG G GANTGSDGVGT G LTTGGTGN 402
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 446961779 392 N LALNG G KIDKL G T TL SSIF L SAK G DVSLQ NG VNIQ N AGV G G 433
Cdd:COG3468 403 N GGGGV G GGGGG G L TL TGGT L TVN G NYTGN NG TLVL N TVL G D 444
HNHc
smart00507 HNH nucleases;
1858-1888
1.87e-04
HNH nucleases;
Pssm-ID: 214702 [Multi-domain]
Cd Length: 52
Bit Score: 40.90
E-value: 1.87e-04
10 20 30
....*....|....*....|....*....|.
gi 446961779 1858 SEYDIH HI K P REF GG TNEFW NL TPVQR K T H Q 1888
Cdd:smart00507 22 EGLEVD HI I P LSD GG NDDLD NL VLLCP K C H I 52
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
