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Conserved domains on  [gi|446962260|ref|WP_001039516|]
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MULTISPECIES: deoxynucleoside kinase [Staphylococcus]

Protein Classification

deoxynucleoside kinase( domain architecture ID 10787652)

deoxynucleoside kinase catalyzes the phosphorylation of deoxyribonucleosides to yield the corresponding monophosphates

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Dck COG1428
Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];
1-202 2.16e-84

Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];


:

Pssm-ID: 441037 [Multi-domain]  Cd Length: 205  Bit Score: 248.16  E-value: 2.16e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   1 MNKPFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDISKWSFQTEMFFLCNRYKQFQDVTQLNQGVVS 80
Cdd:COG1428    1 MKPRYIAVEGNIGAGKTTLARLLAEHLGAELLLEPVEDNPFLEDFYEDPKRWAFPLQLFFLLSRFKQLKDLRQFGGNVVS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260  81 DYHIHKNKIFAKN-----TLSPVEFQKFSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLKLKK 155
Cdd:COG1428   81 DRSIYKDAIFAKLlhemgTLSDREFDLYRQLFDNLTEDLPKPDLVIYLQASVDTLLERIKKRGRDYEQNIDLDYLERLNE 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 446962260 156 DYREYYESLQSngSNVVLIDTTSIDFLKNEQDYEDILHIILPMIGDI 202
Cdd:COG1428  161 AYEEWFEHYDA--SPVLIIDTDELDFVNNPEDLELLLEQIEEKLKGR 205
 
Name Accession Description Interval E-value
Dck COG1428
Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];
1-202 2.16e-84

Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];


Pssm-ID: 441037 [Multi-domain]  Cd Length: 205  Bit Score: 248.16  E-value: 2.16e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   1 MNKPFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDISKWSFQTEMFFLCNRYKQFQDVTQLNQGVVS 80
Cdd:COG1428    1 MKPRYIAVEGNIGAGKTTLARLLAEHLGAELLLEPVEDNPFLEDFYEDPKRWAFPLQLFFLLSRFKQLKDLRQFGGNVVS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260  81 DYHIHKNKIFAKN-----TLSPVEFQKFSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLKLKK 155
Cdd:COG1428   81 DRSIYKDAIFAKLlhemgTLSDREFDLYRQLFDNLTEDLPKPDLVIYLQASVDTLLERIKKRGRDYEQNIDLDYLERLNE 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 446962260 156 DYREYYESLQSngSNVVLIDTTSIDFLKNEQDYEDILHIILPMIGDI 202
Cdd:COG1428  161 AYEEWFEHYDA--SPVLIIDTDELDFVNNPEDLELLLEQIEEKLKGR 205
dNK cd01673
Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to ...
5-185 1.73e-60

Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1.113), adenosine (EC 2.7.1.76), and thymidine (EC 2.7.1.21) kinases. They are key enzymes in the salvage of deoxyribonucleosides originating from extra- or intracellular breakdown of DNA.


Pssm-ID: 238836  Cd Length: 193  Bit Score: 187.44  E-value: 1.73e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   5 FIAIEGPIGVGKSSLAHKLSQTLD---FYEEKEI-ITENPFLSDFYEDISKWSFQTEMFFLCNRYKQFQDVTQL---NQG 77
Cdd:cd01673    1 VIVVEGNIGAGKSTLAKELAEHLGyevVPEPVEPdVEGNPFLEKFYEDPKRWAFPFQLYFLLSRLKQYKDALEHlstGQG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260  78 VVSDYHIHKNKIFAKNTL-----SPVEFQKFSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLK 152
Cdd:cd01673   81 VILERSIFSDRVFAEANLkeggiMKTEYDLYNELFDNLIPELLPPDLVIYLDASPETCLKRIKKRGRPEEQGIPLDYLED 160
                        170       180       190
                 ....*....|....*....|....*....|...
gi 446962260 153 LKKDYREYYESLQSNGSNVVLIDTTSIDFLKNE 185
Cdd:cd01673  161 LHEAYEKWFLPQMYEKAPVLIIDANEADIEYNK 193
dNK pfam01712
Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2. ...
6-192 1.80e-47

Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyze the production of deoxynucleotide 5'-monophosphate from a deoxynucleoside. Using ATP and yielding ADP in the process.


Pssm-ID: 396326  Cd Length: 201  Bit Score: 154.40  E-value: 1.80e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260    6 IAIEGPIGVGKSSLAHKLSQTLDF--YEEKEIITENPFLSDFYEDISKWSFQTEMFFLCNRYKQFQDVTQLNQGVVSDYH 83
Cdd:pfam01712   1 ISIEGNIGAGKSTLTKILSKRLGFkvFEEPVDRWTNPYLDKFYKDPSRWSFALQTYFLNSRFKQQLEAFFTGQVVILERS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   84 IHKNK-IFAKN-----TLSPVEFQKFSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLKLKKDY 157
Cdd:pfam01712  81 IYSDRyIFAKMlydkgTMSDEEYKTYKDLYDNMLLEFPKPDLIIYLKTSPETCLERIKKRGRTEEQNISLDYLERLHEKY 160
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 446962260  158 REYYESLQSngSNVVLIDTTSIDFLKNEQDYEDIL 192
Cdd:pfam01712 161 EAWLKKLNL--SPVLVIDGDELDFVFFEEDREDVM 193
DTMP_kinase TIGR00041
dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage ...
1-185 1.59e-08

dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 161676  Cd Length: 195  Bit Score: 52.37  E-value: 1.59e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260    1 MNKPFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDISKWSF---------QTEMF-FLCNRYKQFQD 70
Cdd:TIGR00041   1 MRGMFIVIEGIDGAGKTTQANLLKKLLQENGYDVLFTREPGGTPIGEKIRELLLnendepltdKAEALlFAADRHEHLED 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   71 VTQ--LNQG--VVSDYHIhknkifakntLSPVEFQKFSKIYDI-----LTEDMI--MPNMIIFLDADLDVLKSRIAKrnR 139
Cdd:TIGR00041  81 KIKpaLAEGklVISDRYV----------FSSIAYQGGARGIDEdlvleLNEDALgdMPDLTIYLDIDPEVALERLRK--R 148
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 446962260  140 SFEHQIEDEYLLKLKKdYREYYESLQSNGSNVVLIDTT-SIDFLKNE 185
Cdd:TIGR00041 149 GELDREEFEKLDFFEK-VRQRYLELADKEKSIHVIDATnSVEEVEQD 194
 
Name Accession Description Interval E-value
Dck COG1428
Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];
1-202 2.16e-84

Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];


Pssm-ID: 441037 [Multi-domain]  Cd Length: 205  Bit Score: 248.16  E-value: 2.16e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   1 MNKPFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDISKWSFQTEMFFLCNRYKQFQDVTQLNQGVVS 80
Cdd:COG1428    1 MKPRYIAVEGNIGAGKTTLARLLAEHLGAELLLEPVEDNPFLEDFYEDPKRWAFPLQLFFLLSRFKQLKDLRQFGGNVVS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260  81 DYHIHKNKIFAKN-----TLSPVEFQKFSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLKLKK 155
Cdd:COG1428   81 DRSIYKDAIFAKLlhemgTLSDREFDLYRQLFDNLTEDLPKPDLVIYLQASVDTLLERIKKRGRDYEQNIDLDYLERLNE 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 446962260 156 DYREYYESLQSngSNVVLIDTTSIDFLKNEQDYEDILHIILPMIGDI 202
Cdd:COG1428  161 AYEEWFEHYDA--SPVLIIDTDELDFVNNPEDLELLLEQIEEKLKGR 205
dNK cd01673
Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to ...
5-185 1.73e-60

Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1.113), adenosine (EC 2.7.1.76), and thymidine (EC 2.7.1.21) kinases. They are key enzymes in the salvage of deoxyribonucleosides originating from extra- or intracellular breakdown of DNA.


Pssm-ID: 238836  Cd Length: 193  Bit Score: 187.44  E-value: 1.73e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   5 FIAIEGPIGVGKSSLAHKLSQTLD---FYEEKEI-ITENPFLSDFYEDISKWSFQTEMFFLCNRYKQFQDVTQL---NQG 77
Cdd:cd01673    1 VIVVEGNIGAGKSTLAKELAEHLGyevVPEPVEPdVEGNPFLEKFYEDPKRWAFPFQLYFLLSRLKQYKDALEHlstGQG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260  78 VVSDYHIHKNKIFAKNTL-----SPVEFQKFSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLK 152
Cdd:cd01673   81 VILERSIFSDRVFAEANLkeggiMKTEYDLYNELFDNLIPELLPPDLVIYLDASPETCLKRIKKRGRPEEQGIPLDYLED 160
                        170       180       190
                 ....*....|....*....|....*....|...
gi 446962260 153 LKKDYREYYESLQSNGSNVVLIDTTSIDFLKNE 185
Cdd:cd01673  161 LHEAYEKWFLPQMYEKAPVLIIDANEADIEYNK 193
dNK pfam01712
Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2. ...
6-192 1.80e-47

Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyze the production of deoxynucleotide 5'-monophosphate from a deoxynucleoside. Using ATP and yielding ADP in the process.


Pssm-ID: 396326  Cd Length: 201  Bit Score: 154.40  E-value: 1.80e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260    6 IAIEGPIGVGKSSLAHKLSQTLDF--YEEKEIITENPFLSDFYEDISKWSFQTEMFFLCNRYKQFQDVTQLNQGVVSDYH 83
Cdd:pfam01712   1 ISIEGNIGAGKSTLTKILSKRLGFkvFEEPVDRWTNPYLDKFYKDPSRWSFALQTYFLNSRFKQQLEAFFTGQVVILERS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   84 IHKNK-IFAKN-----TLSPVEFQKFSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLKLKKDY 157
Cdd:pfam01712  81 IYSDRyIFAKMlydkgTMSDEEYKTYKDLYDNMLLEFPKPDLIIYLKTSPETCLERIKKRGRTEEQNISLDYLERLHEKY 160
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 446962260  158 REYYESLQSngSNVVLIDTTSIDFLKNEQDYEDIL 192
Cdd:pfam01712 161 EAWLKKLNL--SPVLVIDGDELDFVFFEEDREDVM 193
TMPK cd01672
Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the ...
5-196 5.68e-13

Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting step in either de novo or salvage biosynthesis of thymidine triphosphate (TTP).


Pssm-ID: 238835  Cd Length: 200  Bit Score: 64.60  E-value: 5.68e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   5 FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------SKWSFQTEMF-FLCNRYKQFQDV--T 72
Cdd:cd01672    2 FIVFEGIDGAGKTTLIELLAERLEARGYEVVLTREPGGTPIGEAIrellldpedEKMDPRAELLlFAADRAQHVEEVikP 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260  73 QLNQG--VVSDYHIHKNKIFAKNTLsPVEFQKFSKIYDILTEDmIMPNMIIFLDADLDVLKSRIAKRNRsfeHQIEDEYL 150
Cdd:cd01672   82 ALARGkiVLSDRFVDSSLAYQGAGR-GLGEALIEALNDLATGG-LKPDLTILLDIDPEVGLARIEARGR---DDRDEQEG 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 446962260 151 LKLKKDYREYYESLQS-NGSNVVLIDTTsidfLKNEQDYEDILHIIL 196
Cdd:cd01672  157 LEFHERVREGYLELAAqEPERIIVIDAS----QPLEEVLAEILKAIL 199
NDUO42 cd02030
NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a family of proteins that are highly similar ...
6-189 2.91e-11

NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a family of proteins that are highly similar to deoxyribonucleoside kinases (dNK). Members of this family have been identified as one of the subunits of NADH:Ubiquinone oxioreductase (complex I), a multi-protein complex located in the inner mitochondrial membrane. The main function of the complex is to transport electrons from NADH to ubiquinone, which is accompanied by the translocation of protons from the mitochondrial matrix to the inter membrane space.


Pssm-ID: 238988  Cd Length: 219  Bit Score: 60.45  E-value: 2.91e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   6 IAIEGPIGVGKSSLAHKLSQTLDF--YEEKEI-----ITE-----------NPFLSDFYEDISK-----WSFQTEMFFLc 62
Cdd:cd02030    2 ITVDGNIASGKGKLAKELAEKLGMkyFPEAGIhyldsTTGdgkpldpafngNCSLEKFYDDPKSndgnsYRLQSWMYSS- 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260  63 nRYKQFQDVTQ--LN--QGVVSDYHIHKNKIFA-----KNTLSPVEFQKFSKIYDILTEDMIMPNMIIFLDADLDVLKSR 133
Cdd:cd02030   81 -RLLQYSDALEhlLStgQGVVLERSPFSDFVFLeamykQGYIRKQCVDHYNEVKGNTIPELLPPHLVIYLDVPVPEVQKR 159
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446962260 134 IAKRNRSFEHQIEDEYLLKLKKDYREYYESLQSNGSNVVLIDTTSI-DFLKNEQDYE 189
Cdd:cd02030  160 IKKRGDPHEMKVTSAYLQDIENAYKKTFLPEISEHSEVLQYDWTEAgDTEKVVEDIE 216
Tmk COG0125
Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the ...
1-200 7.76e-11

Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the Pathway/BioSystem: Thymidylate biosynthesis


Pssm-ID: 439895 [Multi-domain]  Cd Length: 206  Bit Score: 59.02  E-value: 7.76e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   1 MNKPFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENP-----------FLSDFYEDISKWsfqTE-MFFLCNRYKQF 68
Cdd:COG0125    1 MKGKFIVFEGIDGSGKSTQIKLLAEYLEARGYDVVLTREPggtplgeaireLLLGDNEDMSPR---TElLLFAADRAQHV 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260  69 QDVTQ--LNQG--VVSDYHIHKNkiFAKNTLS-PVEFQKFSKIYDILTEDmIMPNMIIFLDADLDVLKSRIAKRNRSFEH 143
Cdd:COG0125   78 EEVIRpaLAAGkiVICDRYVDSS--LAYQGGGrGLDLEWIRQLNRFATGG-LKPDLTILLDVPPEVALARARARGGELDR 154
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446962260 144 qIEDEYLLKLKKDYREYYESLQSNGSNVVLIDTT-SIdflknEQDYEDILHIILPMIG 200
Cdd:COG0125  155 -FESEDLEFHERVREGYLELAAKEPERIVVIDASqSI-----EEVHAEIREALAELLK 206
DTMP_kinase TIGR00041
dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage ...
1-185 1.59e-08

dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 161676  Cd Length: 195  Bit Score: 52.37  E-value: 1.59e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260    1 MNKPFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDISKWSF---------QTEMF-FLCNRYKQFQD 70
Cdd:TIGR00041   1 MRGMFIVIEGIDGAGKTTQANLLKKLLQENGYDVLFTREPGGTPIGEKIRELLLnendepltdKAEALlFAADRHEHLED 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   71 VTQ--LNQG--VVSDYHIhknkifakntLSPVEFQKFSKIYDI-----LTEDMI--MPNMIIFLDADLDVLKSRIAKrnR 139
Cdd:TIGR00041  81 KIKpaLAEGklVISDRYV----------FSSIAYQGGARGIDEdlvleLNEDALgdMPDLTIYLDIDPEVALERLRK--R 148
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 446962260  140 SFEHQIEDEYLLKLKKdYREYYESLQSNGSNVVLIDTT-SIDFLKNE 185
Cdd:TIGR00041 149 GELDREEFEKLDFFEK-VRQRYLELADKEKSIHVIDATnSVEEVEQD 194
Thymidylate_kin pfam02223
Thymidylate kinase;
8-185 3.86e-06

Thymidylate kinase;


Pssm-ID: 396690  Cd Length: 184  Bit Score: 45.37  E-value: 3.86e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260    8 IEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI-------SKWSFQTE-MFFLCNRYKQFQDVTQ--LNQG 77
Cdd:pfam02223   1 IEGLDGAGKTTQAELLKERLKEQGIKVVFTREPGGTPIGEKIrelllrnEELSPLTEaLLFAADRIQHLEQKIKpaLKQG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   78 --VVSDYHIHKNKIFAKNTLSPVEFqkfskIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNrsfEHQIEDEYLLKLKK 155
Cdd:pfam02223  81 ktVIVDRYLFSGIAYQGAKGGDLDL-----VLSLNPDVPGKPDLTFLLDVDPEVALKRLRRRG---ELEKTEFEQLDFLR 152
                         170       180       190
                  ....*....|....*....|....*....|.
gi 446962260  156 DYREYYESLQSNGSNVVLIDTT-SIDFLKNE 185
Cdd:pfam02223 153 KVRERYLELAKFDERIKIIDASlSIEEVHEE 183
AAA_33 pfam13671
AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the ...
6-146 4.77e-05

AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.


Pssm-ID: 463952 [Multi-domain]  Cd Length: 143  Bit Score: 41.91  E-value: 4.77e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260    6 IAIEGPIGVGKSSLAHKLSQTLDFyeekEIITENPFLSD-FYEDISKWSFQTEMFFLCNR--YKQFQDVTQLNQGVVSDy 82
Cdd:pfam13671   2 ILLVGLPGSGKSTLARRLLEELGA----VRLSSDDERKRlFGEGRPSISYYTDATDRTYErlHELARIALRAGRPVILD- 76
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446962260   83 hihknkifakNT-LSPVEFQKFSKIYdiltEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIE 146
Cdd:pfam13671  77 ----------ATnLRRDERARLLALA----REYGVPVRIVVFEAPEEVLRERLAARARAGGDPSD 127
CMPK cd02020
Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine ...
6-29 5.10e-04

Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor.


Pssm-ID: 238978 [Multi-domain]  Cd Length: 147  Bit Score: 39.01  E-value: 5.10e-04
                         10        20
                 ....*....|....*....|....
gi 446962260   6 IAIEGPIGVGKSSLAHKLSQTLDF 29
Cdd:cd02020    2 IAIDGPAGSGKSTVAKLLAKKLGL 25
COG0645 COG0645
Predicted kinase, contains AAA domain [General function prediction only];
6-180 6.17e-04

Predicted kinase, contains AAA domain [General function prediction only];


Pssm-ID: 440410 [Multi-domain]  Cd Length: 164  Bit Score: 38.74  E-value: 6.17e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260   6 IAIEGPIGVGKSSLAHKLSQTLDF------YEEKEIITENPFLSDFYEDISKWSFQtEMFflcnryKQFQDVTQLNQGVV 79
Cdd:COG0645    2 ILVCGLPGSGKSTLARALAERLGAvrlrsdVVRKRLFGAGLAPLERSPEATARTYA-RLL------ALARELLAAGRSVI 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446962260  80 SDyhihknkifAKNtLSPVEFQKFSKiydiLTEDMIMPNMIIFLDADLDVLKSRIAKRNRsfeHQIEDEYLLKLKKDYRE 159
Cdd:COG0645   75 LD---------ATF-LRRAQREAFRA----LAEEAGAPFVLIWLDAPEEVLRERLEARNA---EGGDSDATWEVLERQLA 137
                        170       180
                 ....*....|....*....|.
gi 446962260 160 YYESLQSNGSNVVLIDTTSID 180
Cdd:COG0645  138 FEEPLTEDEGFLLVVDTSGLE 158
Cmk COG0283
Cytidylate kinase [Nucleotide transport and metabolism];
6-29 2.93e-03

Cytidylate kinase [Nucleotide transport and metabolism];


Pssm-ID: 440052 [Multi-domain]  Cd Length: 220  Bit Score: 37.31  E-value: 2.93e-03
                         10        20
                 ....*....|....*....|....
gi 446962260   6 IAIEGPIGVGKSSLAHKLSQTLDF 29
Cdd:COG0283    3 IAIDGPAGSGKSTVAKALAKRLGY 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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