|
Name |
Accession |
Description |
Interval |
E-value |
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
15-346 |
9.52e-39 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 140.49 E-value: 9.52e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 15 AGSTLAIYLAKAGFHVLLVDRANFPRDTLSTHTFFNNTVALLRETGVLDKLletkAPPVRDIKFQFEDTVIEGLIPevyG 94
Cdd:COG0644 4 AGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLDEPL----ERPVRGARFYSPGGKSVELPP---G 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 95 EESCYCIRRTYLDHILLEQAKsQMNVTVLEGFRVTDVIRDDETVIgVKGLDGdnekQEFLARLVVGADGRSSIIRKLVKS 174
Cdd:COG0644 77 RGGGYVVDRARFDRWLAEQAE-EAGAEVRTGTRVTDVLRDDGRVV-VRTGDG----EEIRADYVVDADGARSLLARKLGL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 175 ELKISIPATVGI-YFGYFSGFRHDNVPKFEVYKIKDNTAI-----LFPTNDDLyVIVGIfplenkelierlklnPESCLR 248
Cdd:COG0644 151 KRRSDEPQDYALaIKEHWELPPLEGVDPGAVEFFFGEGAPggygwVFPLGDGR-VSVGI---------------PLGGPR 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 249 NFFTdnfpnttigarlknaelvepakgilgydnywykgmGKGWALVGDAVCFKDPGMAQGIHDAICGARILSNILSKYKG 328
Cdd:COG0644 215 PRLV-----------------------------------GDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAIAEALE 259
|
330
....*....|....*...
gi 446967497 329 QSDQSNQMSEEYQKAIED 346
Cdd:COG0644 260 GGDFSAEALAEYERRLRE 277
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
2-172 |
1.07e-27 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 111.57 E-value: 1.07e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 2 NKTYDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFPRDTLSTHTFFNNTVALLRETGVLDKLLEtKAPPVRDIKFQFE 81
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLA-RGAPIRGIRVRDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 82 DT--VIEGLIPEVYGEESCYCIRRTYLDHILLEQAKSQmNVTVLEGFRVTDVIRDDETViGVKGLDGdnekQEFLARLVV 159
Cdd:COG0654 80 SDgrVLARFDAAETGLPAGLVVPRADLERALLEAARAL-GVELRFGTEVTGLEQDADGV-TVTLADG----RTLRADLVV 153
|
170
....*....|...
gi 446967497 160 GADGRSSIIRKLV 172
Cdd:COG0654 154 GADGARSAVRRLL 166
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
5-318 |
4.93e-26 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 106.63 E-value: 4.93e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 5 YDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFPR-----DTLSthtffnntvallreTGVLDKLLETKAPPVRDIK-- 77
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRykpcgGALS--------------PRALEELDLPGELIVNLVRga 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 78 ---FQFEDTViEGLIPEVYGeescYCIRRTYLDHILLEQAKSQmNVTVLEGFRVTDV-IRDDETVIGVKGldgdnEKQEF 153
Cdd:TIGR02032 67 rffSPNGDSV-EIPIETELA----YVIDRDAFDEQLAERAQEA-GAELRLGTRVLDVeIHDDRVVVIVRG-----SEGTV 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 154 LARLVVGADGRSSIIRKLV---------KSELKISIPATVGIYfgyfsgfRHDNVpkfEVYKIKDNT----AILFPTNDD 220
Cdd:TIGR02032 136 TAKIVIGADGSRSIVAKKLglkkepreyGVAARAEVEMPDEEV-------DEDFV---EVYIDRGIVpggyGWVFPKGDG 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 221 LY-VIVGIFPLENKE-LIERLKlnpesclrnFFTDNFPnttigaRLKNAELVEPAKGILGYDNYWYKGMGKGWALVGDAV 298
Cdd:TIGR02032 206 TAnVGVGSRSAEEGEdPKKYLK---------DFLARRP------ELKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAA 270
|
330 340
....*....|....*....|
gi 446967497 299 CFKDPGMAQGIHDAICGARI 318
Cdd:TIGR02032 271 GHVNPLTGEGIYYAMRSGDI 290
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
5-239 |
6.11e-19 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 87.38 E-value: 6.11e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 5 YDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFPRDTLSTHTFFNNTVALLRETGVLDKLLETKAPPVRdikfqFEDTV 84
Cdd:pfam01494 2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQAGLEDRILAEGVPHEG-----MGLAF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 85 IEGLIPEVYGEESCYC----IRRTYLDHILLEQAkSQMNVTVLEGFRVTDVIRDDETVIGVKGLDGDNEKQEFLARLVVG 160
Cdd:pfam01494 77 YNTRRRADLDFLTSPPrvtvYPQTELEPILVEHA-EARGAQVRFGTEVLSLEQDGDGVTAVVRDRRDGEEYTVRAKYLVG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 161 ADGRSSIIRKlvksELKISIPATVGIYFGYFS-GFRHDNVPKFEvykiKDNTAILFPTNDDlYVIVGIFPLENKELIERL 239
Cdd:pfam01494 156 CDGGRSPVRK----TLGIEFEGFEGVPFGSLDvLFDAPDLSDPV----ERAFVHYLIYAPH-SRGFMVGPWRSAGRERYY 226
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
1-171 |
3.65e-15 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 76.44 E-value: 3.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 1 MNKTYDVIITGARCAGSTLAIYLAKAGFHVLLVDR-ANFPRD----TLSThtffnNTVALLRETGVLDKLLETKAPPVRD 75
Cdd:PRK06185 3 EVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKhADFLRDfrgdTVHP-----STLELMDELGLLERFLELPHQKVRT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 76 IKFqfedtvieglipEVYGEEscycIRRTYLDHI------------------LLEQAKSQMNVTVLEGFRVTDVIRDDET 137
Cdd:PRK06185 78 LRF------------EIGGRT----VTLADFSRLptpypyiammpqwdfldfLAEEASAYPNFTLRMGAEVTGLIEEGGR 141
|
170 180 190
....*....|....*....|....*....|....
gi 446967497 138 VIGVKGLDGDNEkQEFLARLVVGADGRSSIIRKL 171
Cdd:PRK06185 142 VTGVRARTPDGP-GEIRADLVVGADGRHSRVRAL 174
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
3-184 |
2.00e-14 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 74.21 E-value: 2.00e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 3 KTYDVIITGARCAGSTLAIYLAKAGFHVLLVDRAnfPRDTLS-----------THTffnnTVALLRETGVLDKLLETKAP 71
Cdd:PRK09126 2 MHSDIVVVGAGPAGLSFARSLAGSGLKVTLIERQ--PLAALAdpafdgreialTHA----SREILQRLGAWDRIPEDEIS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 72 PVRDIK-----------FQFEDTVIEGL---IPEvygeescYCIRRTyldhiLLEQAKSQMNVTVLEGFRVTDViRDDET 137
Cdd:PRK09126 76 PLRDAKvlngrspfaltFDARGRGADALgylVPN-------HLIRRA-----AYEAVSQQDGIELLTGTRVTAV-RTDDD 142
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 446967497 138 VIGVKGLDGDNEKqeflARLVVGADGRSSIIRKlvkselKISIPATV 184
Cdd:PRK09126 143 GAQVTLANGRRLT----ARLLVAADSRFSATRR------QLGIGADM 179
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
6-171 |
1.67e-13 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 71.47 E-value: 1.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 6 DVIITGARCAGSTLAIYLAKAGFHVLLVDRANFPRdtlSTHTFFNN--------TVALLRETGVLDKLLETKAPPVRDIk 77
Cdd:TIGR01988 1 DIVIVGGGMVGLALALALARSGLKVALIEATPLPA---PADPGFDNrvsalsaaSIRLLEKLGVWDKIEPARAQPIRDI- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 78 fQFEDTVIEGLI---PEVYGEESC-YCIRRTYLDHILLEQAKSQMNVTVLEGFRVTDVIRDDETVIgVKgLDGDnekQEF 153
Cdd:TIGR01988 77 -HVSDGGSFGALrfdADEIGLEALgYVVENRVLQQALWERLQELPNVTLLCPARVVELPRHSDHVE-LT-LDDG---QQL 150
|
170
....*....|....*...
gi 446967497 154 LARLVVGADGRSSIIRKL 171
Cdd:TIGR01988 151 RARLLVGADGANSKVRQL 168
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
1-170 |
5.70e-12 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 66.85 E-value: 5.70e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 1 MNKTYDVIITGARCAGSTLAIYLAKAGFHVLLVDRAnFPRDTLSTHTFFNNTVALLRETGVLDKlLETKAPPVRDIKfqf 80
Cdd:PRK07494 4 EKEHTDIAVIGGGPAGLAAAIALARAGASVALVAPE-PPYADLRTTALLGPSIRFLERLGLWAR-LAPHAAPLQSMR--- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 81 edtVIEG---LI--PEVY------GEESC-YCIRRTYLDHILLEQAKSQMNVTVLEGFRVTDVIRDDETVIGVKglDGdn 148
Cdd:PRK07494 79 ---IVDAtgrLIraPEVRfraaeiGEDAFgYNIPNWLLNRALEARVAELPNITRFGDEAESVRPREDEVTVTLA--DG-- 151
|
170 180
....*....|....*....|..
gi 446967497 149 ekQEFLARLVVGADGRSSIIRK 170
Cdd:PRK07494 152 --TTLSARLVVGADGRNSPVRE 171
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
1-313 |
1.63e-10 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 62.20 E-value: 1.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 1 MNKTYDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFPRDTLSTHTFFNNTVALLRETGVLDKLLETkappvrdiKFQF 80
Cdd:PRK06847 1 MAAVKKVLIVGGGIGGLSAAIALRRAGIAVDLVEIDPEWRVYGAGITLQGNALRALRELGVLDECLEA--------GFGF 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 81 EDTVI---------EGLIPEVYGEE--SCYCIRRTYLDHILLEQAKsQMNVTVLEGFRVTDVIRDDEtviGVKGLDGDNE 149
Cdd:PRK06847 73 DGVDLfdpdgtllaELPTPRLAGDDlpGGGGIMRPALARILADAAR-AAGADVRLGTTVTAIEQDDD---GVTVTFSDGT 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 150 KQEFlaRLVVGADGRSSIIRKLVKSELKISIPATVGIYFGYFSgfRHDNVPKFEVYKIKDNTAILFPTNDDL-YVIVgif 228
Cdd:PRK06847 149 TGRY--DLVVGADGLYSKVRSLVFPDEPEPEYTGQGVWRAVLP--RPAEVDRSLMYLGPTTKAGVVPLSEDLmYLFV--- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 229 pLENKEliERLKLNPESCLRNF--FTDNFPNTTIGARLKNaeLVEPAK------GILGYDNYWYKGMgkgWALVGDAVCF 300
Cdd:PRK06847 222 -TEPRP--DNPRIEPDTLAALLreLLAPFGGPVLQELREQ--ITDDAQvvyrplETLLVPAPWHRGR---VVLIGDAAHA 293
|
330
....*....|....*..
gi 446967497 301 KDPGMAQG----IHDAI 313
Cdd:PRK06847 294 TTPHLAQGagmaIEDAI 310
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
4-176 |
3.38e-09 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 58.38 E-value: 3.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 4 TYDVIITGARCAGSTLAIYLAKAGFHVLLVDRA----NFPR------------------DTLSTHTFFNNTVALLRETGV 61
Cdd:PRK06183 10 DTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWptlyDLPRavgiddealrvlqaiglaDEVLPHTTPNHGMRFLDAKGR 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 62 LdkLLETKAPPVRDikfqfedtvieglipevYGeescYCIRRTY----LDHILLEQAKSQMNVTVLEGFRVTDVIRDDET 137
Cdd:PRK06183 90 C--LAEIARPSTGE-----------------FG----WPRRNAFhqplLEAVLRAGLARFPHVRVRFGHEVTALTQDDDG 146
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 446967497 138 V-IGVKGLDGdnEKQEFLARLVVGADGRSSIIRKLVKSEL 176
Cdd:PRK06183 147 VtVTLTDADG--QRETVRARYVVGCDGANSFVRRTLGVPF 184
|
|
| PRK06126 |
PRK06126 |
hypothetical protein; Provisional |
6-170 |
1.07e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 235704 [Multi-domain] Cd Length: 545 Bit Score: 56.93 E-value: 1.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 6 DVIITGARCAGSTLAIYLAKAGFHVLLVDRanfpRDTLSTHTFFNNTVA----LLRETGVLDKLLETKAPP--VRDI--- 76
Cdd:PRK06126 9 PVLIVGGGPVGLALALDLGRRGVDSILVER----KDGTAFNPKANTTSArsmeHFRRLGIADEVRSAGLPVdyPTDIayf 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 77 ---------KFQF-----EDTVIEGLIPEVYGEESCYCIRRTYLDHILLEQAKSQMNVTVLEGFRVTDVIRDDETVIG-V 141
Cdd:PRK06126 85 trltgyelaRFRLpsareAITPVGGPDGSWPSPELPHRIPQKYLEPILLEHAAAQPGVTLRYGHRLTDFEQDADGVTAtV 164
|
170 180
....*....|....*....|....*....
gi 446967497 142 KGLDGDnEKQEFLARLVVGADGRSSIIRK 170
Cdd:PRK06126 165 EDLDGG-ESLTIRADYLVGCDGARSAVRR 192
|
|
| PRK11445 |
PRK11445 |
FAD-binding protein; |
5-327 |
2.75e-08 |
|
FAD-binding protein;
Pssm-ID: 183139 [Multi-domain] Cd Length: 351 Bit Score: 55.07 E-value: 2.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 5 YDVIITGARCAGSTLAIYLAKAgFHVLLVDRanfpRDTLSTHTFFNNTVALL-----RETGVLD---------------- 63
Cdd:PRK11445 2 YDVAIIGLGPAGSALARLLAGK-MKVIAIDK----KHQCGTEGFSKPCGGLLapdaqKSFAKDGltlpkdvianpqifav 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 64 KLLETKAPPVRDI----------KFqfeDTVIEGLIP---EVYGEESCYCIRRTyldhilleqaksqmnvtvLEGFRVTd 130
Cdd:PRK11445 77 KTIDLANSLTRNYqrsyinidrhKF---DLWLKSLIPasvEVYHNSLCRKIWRE------------------DDGYHVI- 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 131 virddetvigvkgLDGDNEKQEFLARLVVGADGRSSIIRKLVKSELKisIPATVGIYfGYFSgfRHDNVPKFevykikdn 210
Cdd:PRK11445 135 -------------FRADGWEQHITARYLVGADGANSMVRRHLYPDHQ--IRKYVAIQ-QWFA--EKHPVPFY-------- 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 211 TAILFPTNDDLY----------VIVGIFPLEN-KELIERLKlnpeSCLRNF-FtdNFPNTTigaRLKNAELVEPAKG--- 275
Cdd:PRK11445 189 SCIFDNEITDCYswsiskdgyfIFGGAYPMKDgRERFETLK----EKLSAFgF--QFGKPV---KTEACTVLRPSRWqdf 259
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 446967497 276 ILGYDNYwykgmgkgwALVGDAVCFKDPGMAQGIHDAICGARILSNILSKYK 327
Cdd:PRK11445 260 VCGKDNA---------FLIGEAAGFISPSSLEGISYALDSARILSEVLNKQP 302
|
|
| PRK10015 |
PRK10015 |
oxidoreductase; Provisional |
5-168 |
1.64e-07 |
|
oxidoreductase; Provisional
Pssm-ID: 182194 [Multi-domain] Cd Length: 429 Bit Score: 53.06 E-value: 1.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 5 YDVIITGARCAGSTLAIYLAKAGFHVLLVDRA------NFPRDTLSTHTFFNNTVALLRETGVLDKLLETKappvrdIKF 78
Cdd:PRK10015 6 FDAIVVGAGVAGSVAALVMARAGLDVLVIERGdsagckNMTGGRLYAHTLEAIIPGFAASAPVERKVTREK------ISF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 79 QFEDTVI----EGLIPEVYGEEScYCIRRTYLDHILLEQAKsQMNVTVLEGFRVTDVIRDDETVIGVKGldGDNEKQefl 154
Cdd:PRK10015 80 LTEESAVtldfHREQPDVPQHAS-YTVLRNRLDPWLMEQAE-QAGAQFIPGVRVDALVREGNKVTGVQA--GDDILE--- 152
|
170
....*....|....
gi 446967497 155 ARLVVGADGRSSII 168
Cdd:PRK10015 153 ANVVILADGVNSML 166
|
|
| PRK10157 |
PRK10157 |
putative oxidoreductase FixC; Provisional |
5-168 |
2.83e-07 |
|
putative oxidoreductase FixC; Provisional
Pssm-ID: 182273 [Multi-domain] Cd Length: 428 Bit Score: 52.22 E-value: 2.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 5 YDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFP--RDTLSTHTFFNNTVALLREtgvldklLETKAPPVRDI---KFQ 79
Cdd:PRK10157 6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAgaKNVTGGRLYAHSLEHIIPG-------FADSAPVERLItheKLA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 80 FEDTVIEGLIPEVYGEESC-----YCIRRTYLDHILLEQAKsQMNVTVLEGFRVTDVIRDDETVIGVKGlDGDNEKqefl 154
Cdd:PRK10157 79 FMTEKSAMTMDYCNGDETSpsqrsYSVLRSKFDAWLMEQAE-EAGAQLITGIRVDNLVQRDGKVVGVEA-DGDVIE---- 152
|
170
....*....|....
gi 446967497 155 ARLVVGADGRSSII 168
Cdd:PRK10157 153 AKTVILADGVNSIL 166
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
2-323 |
1.62e-06 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 49.91 E-value: 1.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 2 NKTYDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFPRDTLSTHTFFNNTVALLRETGVLD-------------KLLET 68
Cdd:PRK07045 3 NNPVDVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQNGADLLKPSGIGVVRAMGLLDdvfaagglrrdamRLYHD 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 69 KAPpVRDIKFQFEDTVieG---LIPevygeesCYCIRRtyldhILLEQAKSQMNVTVLEGFRVTDVIRD-DETVIGVKGL 144
Cdd:PRK07045 83 KEL-IASLDYRSASAL--GyfiLIP-------CEQLRR-----LLLAKLDGLPNVRLRFETSIERIERDaDGTVTSVTLS 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 145 DGdnekqEFLA-RLVVGADGRSSIIRKLVKSELKISIPATVGIYFGYFSgfRHDNVPKFEVYKIKDNT--AILFPTNDDL 221
Cdd:PRK07045 148 DG-----ERVApTVLVGADGARSMIRDDVLRMPAERVPYATPMAFGTIA--LTDSVRECNRLYVDSNQglAYFYPIGDQA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 222 YVIVGIFPLEN----------KELIERLK--LNPESclrnffTDNFPNTTIGARLKNAELvepakGILGYDNYWYKGMgk 289
Cdd:PRK07045 221 TRLVVSFPADEmqgyladttrTKLLARLNefVGDES------ADAMAAIGAGTAFPLIPL-----GRMNLDRYHKRNV-- 287
|
330 340 350
....*....|....*....|....*....|....
gi 446967497 290 gwALVGDAVCFKDPGMAQGIHDAICGARILSNIL 323
Cdd:PRK07045 288 --VLLGDAAHSIHPITGQGMNLAIEDAGELGACL 319
|
|
| PRK08773 |
PRK08773 |
UbiH/UbiF family hydroxylase; |
4-171 |
4.19e-05 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181552 [Multi-domain] Cd Length: 392 Bit Score: 45.24 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 4 TYDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFPR-----DTLSTHTFFNNTVALLRETGVLDKLLETKAPPVRdiKF 78
Cdd:PRK08773 6 RRDAVIVGGGVVGAACALALADAGLSVALVEGREPPRwqadqPDLRVYAFAADNAALLDRLGVWPAVRAARAQPYR--RM 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 79 QFEDTVIEGLI---PEVYGEESCYCIRRTYLdhiLLEQ---AKSQMNVTVLEGFRVTDVIRDDEtviGVKGLDGDNEKQE 152
Cdd:PRK08773 84 RVWDAGGGGELgfdADTLGREQLGWIVENDL---LVDRlwaALHAAGVQLHCPARVVALEQDAD---RVRLRLDDGRRLE 157
|
170
....*....|....*....
gi 446967497 153 flARLVVGADGRSSIIRKL 171
Cdd:PRK08773 158 --AALAIAADGAASTLREL 174
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
2-169 |
4.39e-05 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 45.40 E-value: 4.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 2 NKTYDVIITGARCAGSTLAIYLAKAGFHVLLV-----DRANFPRDTLSTHTFfnnTVALLRETGVLDKLL---------- 66
Cdd:PRK07364 16 SLTYDVAIVGGGIVGLTLAAALKDSGLRIALIeaqpaEAAAAKGQAYALSLL---SARIFEGIGVWEKILpqigkfrqir 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 67 --ETKAPPVrdIKFQFEDtviegLIPEVYGeescYCIRRTYLDHILLEQAKSQMNVTVLEGFRVTDVIRDDETVigVKGL 144
Cdd:PRK07364 93 lsDADYPGV--VKFQPTD-----LGTEALG----YVGEHQVLLEALQEFLQSCPNITWLCPAEVVSVEYQQDAA--TVTL 159
|
170 180
....*....|....*....|....*
gi 446967497 145 DGDNEKQEFLARLVVGADGRSSIIR 169
Cdd:PRK07364 160 EIEGKQQTLQSKLVVAADGARSPIR 184
|
|
| COQ6 |
TIGR01989 |
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ... |
5-170 |
6.57e-05 |
|
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Pssm-ID: 273914 [Multi-domain] Cd Length: 437 Bit Score: 44.75 E-value: 6.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 5 YDVIITGARCAGSTLAIYLAK----AGFHVLLVDRANFP----RDTLSTHTFFNN--------TVALLRETGVLDKLLET 68
Cdd:TIGR01989 1 FDVVIVGGGPVGLALAAALGNnpltKDLKVLLLDAVDNPklksRNYEKPDGPYSNrvssitpaSISFFKKIGAWDHIQSD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446967497 69 KAPPVRdiKFQFEDTVIEGLI---PEVYGEESCYCIRRTYLDHILLEQAKSQM--NVTVLEGFRVTDV------IRDDET 137
Cdd:TIGR01989 81 RIQPFG--RMQVWDGCSLALIrfdRDNGKEDMACIIENDNIQNSLYNRLQEYNgdNVKILNPARLISVtipskyPNDNSN 158
|
170 180 190
....*....|....*....|....*....|...
gi 446967497 138 VIGVKGLDGDNekqeFLARLVVGADGRSSIIRK 170
Cdd:TIGR01989 159 WVHITLSDGQV----LYTKLLIGADGSNSNVRK 187
|
|
| PTZ00367 |
PTZ00367 |
squalene epoxidase; Provisional |
2-38 |
3.98e-04 |
|
squalene epoxidase; Provisional
Pssm-ID: 240384 [Multi-domain] Cd Length: 567 Bit Score: 42.53 E-value: 3.98e-04
10 20 30
....*....|....*....|....*....|....*..
gi 446967497 2 NKTYDVIITGARCAGSTLAIYLAKAGFHVLLVDRANF 38
Cdd:PTZ00367 31 NYDYDVIIVGGSIAGPVLAKALSKQGRKVLMLERDLF 67
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
3-35 |
5.91e-04 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 41.81 E-value: 5.91e-04
10 20 30
....*....|....*....|....*....|...
gi 446967497 3 KTYDVIITGARCAGSTLAIYLAKAGFHVLLVDR 35
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLER 33
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
3-38 |
9.48e-04 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 41.32 E-value: 9.48e-04
10 20 30
....*....|....*....|....*....|....*.
gi 446967497 3 KTYDVIITGARCAGSTLAIYLAKAGFHVLLVDRANF 38
Cdd:PRK06292 2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGPL 37
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
6-39 |
3.07e-03 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 39.30 E-value: 3.07e-03
10 20 30
....*....|....*....|....*....|....
gi 446967497 6 DVIITGARCAGSTLAIYLAKAGFHVLLVDRANFP 39
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDP 34
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
4-46 |
3.19e-03 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 39.43 E-value: 3.19e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 446967497 4 TYDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFPRDTLSTH 46
Cdd:PRK11259 3 RYDVIVIGLGSMGSAAGYYLARRGLRVLGLDRFMPPHQQGSSH 45
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
5-46 |
5.03e-03 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 38.66 E-value: 5.03e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 446967497 5 YDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFPRDTLSTH 46
Cdd:TIGR01377 1 FDVIVVGAGIMGCFAAYHLAKHGKKTLLLEQFDLPHSRGSSH 42
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
2-39 |
5.80e-03 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 38.68 E-value: 5.80e-03
10 20 30
....*....|....*....|....*....|....*...
gi 446967497 2 NKTYDVIITGARCAGSTLAIYLAKAGFHVLLVDRANFP 39
Cdd:COG1233 1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTP 38
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
5-35 |
6.53e-03 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 38.18 E-value: 6.53e-03
10 20 30
....*....|....*....|....*....|.
gi 446967497 5 YDVIITGARCAGSTLAIYLAKAGFHVLLVDR 35
Cdd:COG0492 1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEG 31
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
5-37 |
9.62e-03 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 38.24 E-value: 9.62e-03
10 20 30
....*....|....*....|....*....|...
gi 446967497 5 YDVIITGARCAGSTLAIYLAKAGFHVLLVDRAN 37
Cdd:COG3573 6 ADVIVVGAGLAGLVAAAELADAGRRVLLLDQEP 38
|
|
| |
