2,3-diaminopropionate biosynthesis protein SbnB; Members of this protein family are probable ...
5-336
1.92e-171
2,3-diaminopropionate biosynthesis protein SbnB; Members of this protein family are probable NAD-dependent dehydrogenases related to the alanine dehydrogenase of Archaeoglobus fulgidus (see TIGR02371, PDB structure 1OMO and ) and more distantly to ornithine cyclodeaminase. Members include the staphylobactin biosynthesis protein SbnB and tend to occur in contexts suggesting non-ribosomal peptide synthesis, always adjacent to (occasionally fused with) a pyridoxal phosphate-dependent enzyme, SbnA. The pair appears to provide 2,3-diaminopropionate for biosynthesis of siderophores or other secondary metabolites. [Cellular processes, Biosynthesis of natural products]
:
Pssm-ID: 274871 Cd Length: 327 Bit Score: 479.02 E-value: 1.92e-171
2,3-diaminopropionate biosynthesis protein SbnB; Members of this protein family are probable ...
5-336
1.92e-171
2,3-diaminopropionate biosynthesis protein SbnB; Members of this protein family are probable NAD-dependent dehydrogenases related to the alanine dehydrogenase of Archaeoglobus fulgidus (see TIGR02371, PDB structure 1OMO and ) and more distantly to ornithine cyclodeaminase. Members include the staphylobactin biosynthesis protein SbnB and tend to occur in contexts suggesting non-ribosomal peptide synthesis, always adjacent to (occasionally fused with) a pyridoxal phosphate-dependent enzyme, SbnA. The pair appears to provide 2,3-diaminopropionate for biosynthesis of siderophores or other secondary metabolites. [Cellular processes, Biosynthesis of natural products]
Pssm-ID: 274871 Cd Length: 327 Bit Score: 479.02 E-value: 1.92e-171
Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family [Amino acid ...
5-333
5.58e-79
Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family [Amino acid transport and metabolism]; Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family is part of the Pathway/BioSystem: Proline biosynthesis
Pssm-ID: 441972 [Multi-domain] Cd Length: 322 Bit Score: 243.90 E-value: 5.58e-79
Ornithine cyclodeaminase/mu-crystallin family; This family contains the bacterial Ornithine ...
26-328
3.59e-63
Ornithine cyclodeaminase/mu-crystallin family; This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyzes the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Pssm-ID: 426766 [Multi-domain] Cd Length: 313 Bit Score: 203.08 E-value: 3.59e-63
2,3-diaminopropionate biosynthesis protein SbnB; Members of this protein family are probable ...
5-336
1.92e-171
2,3-diaminopropionate biosynthesis protein SbnB; Members of this protein family are probable NAD-dependent dehydrogenases related to the alanine dehydrogenase of Archaeoglobus fulgidus (see TIGR02371, PDB structure 1OMO and ) and more distantly to ornithine cyclodeaminase. Members include the staphylobactin biosynthesis protein SbnB and tend to occur in contexts suggesting non-ribosomal peptide synthesis, always adjacent to (occasionally fused with) a pyridoxal phosphate-dependent enzyme, SbnA. The pair appears to provide 2,3-diaminopropionate for biosynthesis of siderophores or other secondary metabolites. [Cellular processes, Biosynthesis of natural products]
Pssm-ID: 274871 Cd Length: 327 Bit Score: 479.02 E-value: 1.92e-171
Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family [Amino acid ...
5-333
5.58e-79
Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family [Amino acid transport and metabolism]; Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family is part of the Pathway/BioSystem: Proline biosynthesis
Pssm-ID: 441972 [Multi-domain] Cd Length: 322 Bit Score: 243.90 E-value: 5.58e-79
Ornithine cyclodeaminase/mu-crystallin family; This family contains the bacterial Ornithine ...
26-328
3.59e-63
Ornithine cyclodeaminase/mu-crystallin family; This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyzes the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Pssm-ID: 426766 [Multi-domain] Cd Length: 313 Bit Score: 203.08 E-value: 3.59e-63
Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
References:
Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
of the residues that compose this conserved feature have been mapped to the query sequence.
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Functional characterization of the conserved domain architecture found on the query.
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if a domain or superfamily has been annotated with functional sites (conserved features),
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click on the bars or triangles to view your query sequence embedded in a multiple sequence alignment of the proteins used to develop the corresponding domain model.
The table lists conserved domains identified on the query sequence. Click on the plus sign (+) on the left to display full descriptions, alignments, and scores.
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(labeled illustration) Standard Display shows only the best scoring domain model from each source, in each hit category listed below for each region on the query sequence.
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Retrieve proteins that contain one or more of the domains present in the query sequence, using the Conserved Domain Architecture Retrieval Tool
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