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Conserved domains on  [gi|447081265|ref|WP_001158521|]
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MULTISPECIES: DUF6475 domain-containing protein [Gammaproteobacteria]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6475 pfam20081
Domain of unknown function (DUF6475); This presumed domain is functionally uncharacterized. ...
 99-188 2.63e-50

Domain of unknown function (DUF6475); This presumed domain is functionally uncharacterized. This domain family is found in Proteobacteria and viruses, and is approximately 90 amino acids in length. It contains the conserved motifs FDD and MGGW.


:

Pssm-ID: 437913  Cd Length: 90  Bit Score: 158.53  E-value: 2.63e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447081265   99 VMFDDALIHRVISDMGGWVELCKVDDREYPFKQKEFLTRYQAYLLRDEVGEYPRLLQGIADHQNQQKGFDMQAPVAVGDW 178
Cdd:pfam20081   1 VVFDDPLIHRVIEDMGGWIKLCRKDEDELPFVAKEFENRYRGYRSRPESPEYPRVLIGIAEAQNARKGFPSPPPVLIGDP 80

                          90
                  ....*....|
gi 447081265  179 SKAAQVYTRG 188
Cdd:pfam20081  81 ERARQVMQGG 90
 
Name Accession Description Interval E-value
DUF6475 pfam20081
Domain of unknown function (DUF6475); This presumed domain is functionally uncharacterized. ...
 99-188 2.63e-50

Domain of unknown function (DUF6475); This presumed domain is functionally uncharacterized. This domain family is found in Proteobacteria and viruses, and is approximately 90 amino acids in length. It contains the conserved motifs FDD and MGGW.


Pssm-ID: 437913  Cd Length: 90  Bit Score: 158.53  E-value: 2.63e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447081265   99 VMFDDALIHRVISDMGGWVELCKVDDREYPFKQKEFLTRYQAYLLRDEVGEYPRLLQGIADHQNQQKGFDMQAPVAVGDW 178
Cdd:pfam20081   1 VVFDDPLIHRVIEDMGGWIKLCRKDEDELPFVAKEFENRYRGYRSRPESPEYPRVLIGIAEAQNARKGFPSPPPVLIGDP 80

                          90
                  ....*....|
gi 447081265  179 SKAAQVYTRG 188
Cdd:pfam20081  81 ERARQVMQGG 90
 
Name Accession Description Interval E-value
DUF6475 pfam20081
Domain of unknown function (DUF6475); This presumed domain is functionally uncharacterized. ...
 99-188 2.63e-50

Domain of unknown function (DUF6475); This presumed domain is functionally uncharacterized. This domain family is found in Proteobacteria and viruses, and is approximately 90 amino acids in length. It contains the conserved motifs FDD and MGGW.


Pssm-ID: 437913  Cd Length: 90  Bit Score: 158.53  E-value: 2.63e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447081265   99 VMFDDALIHRVISDMGGWVELCKVDDREYPFKQKEFLTRYQAYLLRDEVGEYPRLLQGIADHQNQQKGFDMQAPVAVGDW 178
Cdd:pfam20081   1 VVFDDPLIHRVIEDMGGWIKLCRKDEDELPFVAKEFENRYRGYRSRPESPEYPRVLIGIAEAQNARKGFPSPPPVLIGDP 80

                          90
                  ....*....|
gi 447081265  179 SKAAQVYTRG 188
Cdd:pfam20081  81 ERARQVMQGG 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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