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Conserved domains on  [gi|447088063|ref|WP_001165319|]
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MULTISPECIES: DUF2513 domain-containing protein [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2513 super family cl11307
Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.
 11-110 6.49e-11

Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.


The actual alignment was detected with superfamily member pfam10711:

Pssm-ID: 431452  Cd Length: 100  Bit Score: 54.94  E-value: 6.49e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447088063   11 LLEAFEASDSPdTDIIRLNDLGFNCET-DTFVFHMRLLEDRGLIIRSDGEPGFGAIQSLDGmthwavmplRLTAMGHDFL 89
Cdd:pfam10711  10 ILLEIEELETG-PDPVDLAILAIDGYSeEEIAYHLKLLHEAGLIEASGGTSLNSIPSFIVR---------SLTWDGHDFL 79

                          90       100
                  ....*....|....*....|.
gi 447088063   90 DALRNKEVWATLKTGFKDASM 110
Cdd:pfam10711  80 DNIRDDTVWNKTKDIAKKKGG 100
 
Name Accession Description Interval E-value
DUF2513 pfam10711
Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.
 11-110 6.49e-11

Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.


Pssm-ID: 431452  Cd Length: 100  Bit Score: 54.94  E-value: 6.49e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447088063   11 LLEAFEASDSPdTDIIRLNDLGFNCET-DTFVFHMRLLEDRGLIIRSDGEPGFGAIQSLDGmthwavmplRLTAMGHDFL 89
Cdd:pfam10711  10 ILLEIEELETG-PDPVDLAILAIDGYSeEEIAYHLKLLHEAGLIEASGGTSLNSIPSFIVR---------SLTWDGHDFL 79

                          90       100
                  ....*....|....*....|.
gi 447088063   90 DALRNKEVWATLKTGFKDASM 110
Cdd:pfam10711  80 DNIRDDTVWNKTKDIAKKKGG 100
GT_2_like_c cd04186
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 6-64 2.89e-03

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133029 [Multi-domain]  Cd Length: 166  Bit Score: 35.61  E-value: 2.89e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 447088063   6 EYLKGLLEAFEASDSPDTDIIrLNDlgfNCETDTFVFHMRLLEDRGLIIRSDGEPGFGA 64
Cdd:cd04186   10 EYLKACLDSLLAQTYPDFEVI-VVD---NASTDGSVELLRELFPEVRLIRNGENLGFGA 64
 
Name Accession Description Interval E-value
DUF2513 pfam10711
Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.
 11-110 6.49e-11

Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.


Pssm-ID: 431452  Cd Length: 100  Bit Score: 54.94  E-value: 6.49e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447088063   11 LLEAFEASDSPdTDIIRLNDLGFNCET-DTFVFHMRLLEDRGLIIRSDGEPGFGAIQSLDGmthwavmplRLTAMGHDFL 89
Cdd:pfam10711  10 ILLEIEELETG-PDPVDLAILAIDGYSeEEIAYHLKLLHEAGLIEASGGTSLNSIPSFIVR---------SLTWDGHDFL 79

                          90       100
                  ....*....|....*....|.
gi 447088063   90 DALRNKEVWATLKTGFKDASM 110
Cdd:pfam10711  80 DNIRDDTVWNKTKDIAKKKGG 100
GT_2_like_c cd04186
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 6-64 2.89e-03

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133029 [Multi-domain]  Cd Length: 166  Bit Score: 35.61  E-value: 2.89e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 447088063   6 EYLKGLLEAFEASDSPDTDIIrLNDlgfNCETDTFVFHMRLLEDRGLIIRSDGEPGFGA 64
Cdd:cd04186   10 EYLKACLDSLLAQTYPDFEVI-VVD---NASTDGSVELLRELFPEVRLIRNGENLGFGA 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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