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Conserved domains on  [gi|447117925|ref|WP_001195181|]
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MULTISPECIES: fimbria/pilus periplasmic chaperone [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15195 super family cl33105
molecular chaperone FimC;
16-229 1.10e-84

molecular chaperone FimC;


The actual alignment was detected with superfamily member PRK15195:

Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 251.32  E-value: 1.10e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  16 VLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFVITPPLFSMQGKKENT 95
Cdd:PRK15195  10 IIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLFVSEPKSENT 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  96 LRIINAtNHQLPGDRESLFWVNVKAIPAMEKDQ-KNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTLI 174
Cdd:PRK15195  90 LRIIYA-GPPLAADRESLFWMNVKAIPSVDKNAlEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLKVH 168

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 447117925 175 NPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAVTGDISFQTINDYGALTP 229
Cdd:PRK15195 169 NPSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTP 223
 
Name Accession Description Interval E-value
PRK15195 PRK15195
molecular chaperone FimC;
16-229 1.10e-84

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 251.32  E-value: 1.10e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  16 VLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFVITPPLFSMQGKKENT 95
Cdd:PRK15195  10 IIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLFVSEPKSENT 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  96 LRIINAtNHQLPGDRESLFWVNVKAIPAMEKDQ-KNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTLI 174
Cdd:PRK15195  90 LRIIYA-GPPLAADRESLFWMNVKAIPSVDKNAlEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLKVH 168

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 447117925 175 NPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAVTGDISFQTINDYGALTP 229
Cdd:PRK15195 169 NPSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTP 223
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
11-229 9.88e-78

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 234.11  E-value: 9.88e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  11 SFMATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDpASVYLIQSWIEN-----AGDQKDTQFVITPPL 85
Cdd:COG3121    3 RLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTG-DTPYLVQSWVDDwdqdaGPDKATAPFVVTPPL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  86 FSMQGKKENTLRIInATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFR 165
Cdd:COG3121   82 FRLEPGKSQTVRII-RTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 447117925 166 RSGSKLTLINPTPYFITVTNMKAGNSN----LPNTMVPPKGEVSVDIPHAVT----GDISFQTINDYGALTP 229
Cdd:COG3121  161 LVGNGLTVTNPGPYYVTLSDLSLGAGGkklkKGLGMVLPGSTRRWPLPAGASlaagGKVTWATINDYGGAVP 232
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 33-152 2.08e-45

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 147.73  E-value: 2.08e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925   33 VALGATRVIYPANQKQVLLPVTNNDPASvYLIQSWIENAG-----DQKDTQFVITPPLFSMQGKKENTLRIINATNHqLP 107
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNP-YLVQSWVDDGNeegtdEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPP-LP 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 447117925  108 GDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLA 152
Cdd:pfam00345  79 TDRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK15195 PRK15195
molecular chaperone FimC;
16-229 1.10e-84

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 251.32  E-value: 1.10e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  16 VLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFVITPPLFSMQGKKENT 95
Cdd:PRK15195  10 IIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLFVSEPKSENT 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  96 LRIINAtNHQLPGDRESLFWVNVKAIPAMEKDQ-KNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTLI 174
Cdd:PRK15195  90 LRIIYA-GPPLAADRESLFWMNVKAIPSVDKNAlEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLKVH 168

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 447117925 175 NPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAVTGDISFQTINDYGALTP 229
Cdd:PRK15195 169 NPSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTP 223
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
11-229 9.88e-78

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 234.11  E-value: 9.88e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  11 SFMATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDpASVYLIQSWIEN-----AGDQKDTQFVITPPL 85
Cdd:COG3121    3 RLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTG-DTPYLVQSWVDDwdqdaGPDKATAPFVVTPPL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  86 FSMQGKKENTLRIInATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFR 165
Cdd:COG3121   82 FRLEPGKSQTVRII-RTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 447117925 166 RSGSKLTLINPTPYFITVTNMKAGNSN----LPNTMVPPKGEVSVDIPHAVT----GDISFQTINDYGALTP 229
Cdd:COG3121  161 LVGNGLTVTNPGPYYVTLSDLSLGAGGkklkKGLGMVLPGSTRRWPLPAGASlaagGKVTWATINDYGGAVP 232
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 17-229 4.56e-64

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 198.83  E-value: 4.56e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  17 LLLLLFACHSTIANAA--VALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFVITPPLFSMQGKKEN 94
Cdd:PRK15188  11 LLLLLSAAGLSFAAQAggIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKEN 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  95 TLRIInATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTLI 174
Cdd:PRK15188  91 ILRIM-YVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTIT 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 447117925 175 NPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDiphAVTGDISFQTINDYGALTP 229
Cdd:PRK15188 170 NPSPYYVSMVELYSAGKKLPNTMVPPKGAITLP---ATPGQVSLRTVNDFGATTP 221
PRK15208 PRK15208
molecular chaperone LpfB;
10-226 4.87e-57

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 180.88  E-value: 4.87e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  10 VSFMATVLLLLLFACHStianAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFVITPPLFSMQ 89
Cdd:PRK15208   4 ISFTALALALIAQNSFA----GGVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKTPFIITPPLFKLD 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  90 GKKENTLRIINATNhQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGS 169
Cdd:PRK15208  80 PTKNNVLRIVNITN-TLPQDRESVYWINVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGN 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925 170 KLTLINPTPYFITVTNMKAGNSNLPNT-MVPPKGEVSVDIPHAV--TGDISFQTINDYGA 226
Cdd:PRK15208 159 QIKVENPSAFNLTFNQFYANGRDIEKAgMVPAKGSLNIELPAGTgkVSEVKYNIINDFGT 218
lfpB PRK15290
fimbrial chaperone;
15-235 3.08e-49

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 161.70  E-value: 3.08e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  15 TVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIE--NAGDQKDTQFVITPPLFSMQGKK 92
Cdd:PRK15290  21 TAIILSVFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDpfNKEDKSKAPFTVIPPVSRLEPSQ 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  93 ENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDqKNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLT 172
Cdd:PRK15290 101 EKVLRIIHTKGVSLPDDRESVFWLNIKNIPPSASN-KATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRNLI 179

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 447117925 173 LINPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAVTG-DISFQTINDYGALTPRIKATM 235
Cdd:PRK15290 180 AENPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPLPANSAGgQMTWRFINDYGAVSDPIKMTL 243
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 13-234 1.03e-48

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 159.56  E-value: 1.03e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  13 MATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASvYLIQSW---IENAGDQKDTQFVITPPLFSMQ 89
Cdd:PRK15299   4 LAKAGLLCCLLCGSLAHAAGINIGTTRVIFHGDAKDASISISNSDNVP-YLIQSWaqsISETGASGDAPFMVTPPLFRLN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  90 GKKENTLRIINaTNHQLPGDRESLFWVNVKAIPAMEKDQKNeNTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGS 169
Cdd:PRK15299  83 GGQKNVLRIIR-TGGNLPEDRESLYWLDIKSIPSSNPDNKH-NTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 447117925 170 KLTLINPTPYFITVTNMKAGNSNLPNT-MVPPKGEVSVDIPHAVTGDISFQTINDYGALTPRIKAT 234
Cdd:PRK15299 161 TLTVKNPTPYYMNFATLSVGSQKVKAPrYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGPEHKQT 226
PRK09926 PRK09926
fimbrial chaperone;
10-225 5.97e-46

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 152.95  E-value: 5.97e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  10 VSFMATVLLLLLFACHSTIANAAVA---LGATRVIYPANQKQVLLPVTN--NDPasvYLIQSWIENAGDQKDTQ-----F 79
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIAdivISGTRIIYKSDQKDVNVRLENkgNNP---LLVQSWLDTGDDNAEPGsikvpF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  80 VITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIP--AMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEE 157
Cdd:PRK09926  78 TATPPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPpkPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSE 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925 158 APAMLRFR--RSGSKLTLI--NPTPYFITVTN--MKAGNSNLP--NTMVPPKGEVSVDIP----HAVTGDISFQTINDYG 225
Cdd:PRK09926 158 APLALKWSwaGSEGKASLRvtNPTPYYVSFSSgdLEAGGKRYPvdSKMIAPFSDESMKVKglsgKASSGKVHFYAINDFG 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 33-152 2.08e-45

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 147.73  E-value: 2.08e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925   33 VALGATRVIYPANQKQVLLPVTNNDPASvYLIQSWIENAG-----DQKDTQFVITPPLFSMQGKKENTLRIINATNHqLP 107
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNP-YLVQSWVDDGNeegtdEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPP-LP 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 447117925  108 GDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLA 152
Cdd:pfam00345  79 TDRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
PRK15295 PRK15295
fimbrial assembly chaperone;
11-225 4.44e-42

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 142.78  E-value: 4.44e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  11 SFMATVLLLllfacHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASvYLIQSWIENAGDQ---KDTqFVITPPLFS 87
Cdd:PRK15295   4 KKSVLVVLL-----TSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKA-NLVQSWLSVVDPQvtnKQA-FIITPPLFR 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  88 MQGKKENTLRIINaTNHQLPGDRESLFWVNVKAIPAMEkDQKNENTLQLAIISRIKMFYRPTHL-AMAPEEAPAMLRFRR 166
Cdd:PRK15295  77 LDAGQKNSIRVIR-SGAPLPADRESMYWLNIKGIPSID-DNASANRVEISINTQIKLIYRPPALtKSTPDSQSQQLKWQT 154

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 447117925 167 SGSKLTLINPTPYFITVTNMKAGNSNLPN-TMVPPKGEVSVDIPH--AVTGDISFQTINDYG 225
Cdd:PRK15295 155 AGDVITVNNPTPYYMNFASVTLNSHEVKSaTFVPPKSSASFKLGStaAPHGTVTWRLISDYG 216
PRK15211 PRK15211
fimbrial chaperone;
16-226 6.64e-40

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 137.26  E-value: 6.64e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  16 VLLLLLFachSTIANAAVALGATRVIYPANQKQVLLPVTNNDpASVYLIQSWIENAgDQKDTQ--FVITPPLFSMQGKKE 93
Cdd:PRK15211  10 SLLSLAV---CGQAMAAFVLNGTRFIYDEGRKNISFEVTNQA-DQTYGGQVWIDNT-TQGSSTvyMVPAPPFFKVRPKEK 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  94 NTLRIINaTNHQLPGDRESLFWVNVKAIPAMEKDQKNeNTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTL 173
Cdd:PRK15211  85 QIIRIMK-TDSALPKDRESLFWLNVQEIPPKPKASEG-NVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGETYL 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 447117925 174 INPTPYFITVTNMKAGNSNL--------PNTMVPPKGEVSVDIPHAvTGDISFQTINDYGA 226
Cdd:PRK15211 163 KNPTPYYFAVTGVKLNGQPVklsdrvmnEIAQLAPFSEVSLGKLSL-NGTVTVQAVNDWGG 222
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 16-227 9.97e-35

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 124.12  E-value: 9.97e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  16 VLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFVITPPLFSMQGKKENT 95
Cdd:PRK15254   1 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  96 LRI--INATNHQLPGDRESLFWVNVKAIPAMEKDqknENTLQLAIISRIKMFYRPTHLAMAPEEAPA-MLRFRRSGSKLT 172
Cdd:PRK15254  81 VRItqVRGLTDKLPQDRETLFWFNVRGVPPKPED---DNVLQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNAGHLT 157

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 447117925 173 LINPTPYFITVTNMKAGNSNL-----PNTMVPPKGEVSVD-IPHAVTGDISFQTINDYGAL 227
Cdd:PRK15254 158 LRNPTPYYITVAWLGADRSHRlsgfrEGVMVPPLGSLPLKaVLPAETRTLWVGYIDDYGGL 218
PRK15249 PRK15249
fimbrial chaperone;
18-226 2.93e-33

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 120.67  E-value: 2.93e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  18 LLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDpASVYLIQSWIENaGDQKD-------TQFVITPPLFSMQG 90
Cdd:PRK15249  15 VFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNND-AIPYIVQTWFDD-GDMNTspenssaMPFIATPPVFRIQP 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  91 KKENTLRIINATNHQLPGDRESLFWVNVKAI-PAMEKDQKNENTLQLAIISRIKMFYRPTHLA----MAPEEAPAMLRFR 165
Cdd:PRK15249  93 KAGQVVRVIYNNTKKLPQDRESVFWFNVLQVpPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLGkpdnLAKKLQIKTVNKG 172

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925 166 RSGSKLTLINPTPYFITVTNMKAGNSNLPNT----MVPPKGEVSVDIPHAVT-----GDISFQTINDYGA 226
Cdd:PRK15249 173 SGKSGIVIVNPQPWFASLSNLNVKVNGASYNldadMIAPFSSQTWWLPGKRSlksfsGTVTVTLVNDQGA 242
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 29-225 4.57e-31

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 114.76  E-value: 4.57e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  29 ANAAVALGATRVIYPANQKQVLLPVTN-NDPASvyLIQSWIENAG-----DQKDTQFVITPPLFSMQGKKENTLRIINAT 102
Cdd:PRK15253  31 AHAGIVIYGTRVIYPAEKKEVVVQLVNqGEQAS--LVQSWIDDGNtslppEKIQVPFMLTPPVARVAAESGQQIKIKKMP 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925 103 NhQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTLINPTPYFIT 182
Cdd:PRK15253 109 N-SLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVIMKNDTANWIT 187

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 447117925 183 VTNMKAGNS--NLPNTMVPPKGEVSVDIPHAVTGDISFQTINDYG 225
Cdd:PRK15253 188 VTDVKAGNTkiNDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNG 232
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
29-225 2.29e-30

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 112.49  E-value: 2.29e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  29 ANAAVALGATRVIYPANQKQVLLPVTNNDPASvYLIQS-------WIENAGDQKDTQFVITPPLFSMQGKKENTLRIInA 101
Cdd:PRK15192  20 AQAGVVIGGTRFIYHAGAPALSVPVSNHSEAS-WLIDThilpggrWPGTKNEGNITPFVVTPPLFMLSARQENSMRVV-Y 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925 102 TNHQLPGDRESLFWVNVKAIPAMEKDQkneNTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTLINPTPYFI 181
Cdd:PRK15192  98 TGAPLPADRESLFTLSIAAIPSGKPEA---NRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNPTPYYV 174

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 447117925 182 TVTNMKAGNSNLPNT-MVPPKGEVSVD-IPHAVTGDISFQTINDYG 225
Cdd:PRK15192 175 TLFLLRANERAQDNAgVVAPFATRQTDwCRHTVRCTVRWQSINDYG 220
PRK15224 PRK15224
pili assembly chaperone PapD;
32-226 1.48e-29

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 110.60  E-value: 1.48e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  32 AVALGATRVIYPANQKQVLLPVTNNDPASVyLIQSWIENAGDQKDTQFVITPPLFSMQGKKENTLRIINaTNHQLPGDRE 111
Cdd:PRK15224  29 SVKLGATRVIYHAGTAGATLSVSNPQNYPI-LVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVR-TGGDMPTDRE 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925 112 SLFWVNVKAIPAmEKDQKNENT------LQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTLINPTPYFITVTN 185
Cdd:PRK15224 107 TLQWVCIKAVPP-ENEPSDTQAkgatldLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLAS 185

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 447117925 186 MKAGNSNLPN-TMVPPKGEVSVDIPHAVTGDISFQTINDYGA 226
Cdd:PRK15224 186 VTVGGKPITGlEYIPPFADKTLNMPGSAHGDIEWRVITDFGG 227
PRK15246 PRK15246
fimbrial assembly chaperone;
31-225 2.25e-29

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 110.05  E-value: 2.25e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  31 AAVALGATRVIYPANQKQVLLPVTNNDpASVYLIQSW-----IENAGDQKDTQFVITPPLFSMQGKKENTLRIINATNHQ 105
Cdd:PRK15246  10 AAVNIDRTRIIFASDDVAQSLTLSNDN-TTPMLLQVWtdagnIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSRQQ 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925 106 LPGDRESLFWVNVKAIPAMEKDQKN-ENTLQLAIISRIKMFYRPTHLAmAPEEAPAM-LRFRRSGSKLTLINPTPYFITV 183
Cdd:PRK15246  89 LATDRESLFWLNIYQIPPVTQDIKNhPRKLVLPLRLRLKILIRPTGLK-APTEAEEKkLRFIAKENTIRIVNPTSWYMSL 167

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 447117925 184 TNMKAGNSNLPNTMVPPKGEVSVDI---PHAvtGD-ISFQTINDYG 225
Cdd:PRK15246 168 TLTMDNKKSIGDIMVAPKTALDVPLtrsPTP--GAsINYAVINDSG 211
PRK15218 PRK15218
fimbrial assembly chaperone;
17-190 9.72e-29

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 108.14  E-value: 9.72e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  17 LLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVyLIQSWIENaGDQK------DTQFVITPPLFSMQG 90
Cdd:PRK15218   4 MIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSS-LIQAWIDN-GDTSlppeklQVPFIMTPPVIRVAA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  91 KKENTLRIINATNHqLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSK 170
Cdd:PRK15218  82 NSGQQLKIKKLANN-LPGDRESLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGS 160

                        170       180
                 ....*....|....*....|
gi 447117925 171 LTLINPTPYFITVTNMKAGN 190
Cdd:PRK15218 161 ISVKNNSANWITIPEIKAKS 180
PRK11385 PRK11385
fimbrial chaperone;
17-230 6.50e-27

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 103.68  E-value: 6.50e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  17 LLLLLFACHSTIA----NAAVALGATRVIYPANQKQVLLPVTNNDPASvYLIQSWIEN----AGDQKDT---QFVITPPL 85
Cdd:PRK11385   8 LALLIFAVLSLLVagelQAGVVVGGTRFIFPADRESISILLTNTSQES-WLINSKINRptrwAGGEASTvpaPLLAAPPL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  86 FSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDQKnenTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFR 165
Cdd:PRK11385  87 ILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQ---SVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWT 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 447117925 166 RSGSKLTLINPTPYFITVTNMKAGNSNLPNT-MVPPKGEVSVDIPHAVTG-DISFQTINDYGALTPR 230
Cdd:PRK11385 164 RNSQGVQLTNPTPYYINLIQVSVNGKALSNAgVVPPKSQRQTSWCQAIAPcHVAWRAINDYGGLSAK 230
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 11-226 1.27e-25

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 100.62  E-value: 1.27e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  11 SFMATVLLLLLFACHStianaAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQ-FVITPPLFSMQ 89
Cdd:PRK15274  11 ALIASVLLAAPLVSHS-----AIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRyFTALPPLQRIE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  90 GKKENTLRIIN-ATNHQLPGDRESLFWVNVKAIPAmekDQKNENTLQLAIISRIKMFYRPTHLAMAPEEA---PAMLRFR 165
Cdd:PRK15274  86 PKSDGQVKVQPlPAAASLPQDRESLFYFNVREIPP---KSDKPNTLQLALQTRIKFFYRPVAVARQVDKThpwQTKLTLT 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 447117925 166 RSGSKLTLINPTPYFITVTNMKAGN----SNLPNTMVPPKGEVSVDIPHAVTGDIS-FQTINDYGA 226
Cdd:PRK15274 163 YQGDGVIFDNPTPFYLVISNAGSKEnetaSGFKNLLIAPREKVTSPIKGASLGSSPvVGYVDDYGG 228
PRK15285 PRK15285
fimbrial chaperone StfD;
13-231 4.78e-25

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 99.08  E-value: 4.78e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  13 MATVLLLLLFACHStiANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQ-FVITPPLFSMQGK 91
Cdd:PRK15285   9 LAAVLLLLLGGYGS--AQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSpLIVVPPVQRIEPS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  92 KENTLRIINATN-HQLPGDRESLFWVNVKAIPAmekDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLR--FRRSG 168
Cdd:PRK15285  87 AIGQVKIQGMPAlASLPQDRETLFYYNVREIPP---QSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKitLQRQG 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 447117925 169 SKLTLINPTPYFITVTNMKAGNSNLPNT-----MVPPKGEVSVDIPHAVTGDISFQT-INDYGALTPRI 231
Cdd:PRK15285 164 NGYQVSNPTGYYVVLSNASNRMDGTPARgfsplVIAPKSNVTLGGDASELGHSPVLTyVNDYGARLPLI 232
PRK15233 PRK15233
fimbrial chaperone SefB;
35-226 4.48e-22

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 90.94  E-value: 4.48e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  35 LGATRVIYPANQKQVLLPVTNNDPASVyLIQSWIENAGDQKDTQFVITPPLFSMQGKKENTLRIINATNhQLPGDRESLF 114
Cdd:PRK15233  44 LGTTRVIYKEDAPSTSFWIMNEKEYPI-LVQTQVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSN-LFNKNEESLY 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925 115 WVNVKAIPAM---EKDQKNENTLQLAII----SRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTLINPTPYFITVTNMK 187
Cdd:PRK15233 122 WLCVKGVPPLndnESNNKNNITTNLNVNvvtnSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIANIK 201

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 447117925 188 AGN--SNLPNTMVPPKGevSVDIPHAVTGDISFQTINDYGA 226
Cdd:PRK15233 202 SGNlsFNIPNGYIEPFG--YAQLPGGVHSKITLTILDDNGA 240
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 175-229 4.19e-10

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 54.19  E-value: 4.19e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 447117925  175 NPTPYFITVTNMKAGNSN----LPNTMVPPKGEVSVD--IPHAVTGDISFQTINDYGALTP 229
Cdd:pfam02753   3 NPTPYYVTFSSLSLGGGGkelaLDPGMVAPFSSQTFAglPAPAAGGTVSYTYINDYGGIVP 63
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 11-225 9.13e-07

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 48.11  E-value: 9.13e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  11 SFMATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSwIENAGDQKDTQFVITPPLFSMQG 90
Cdd:PRK09918   4 NLFFLFTALVLLSSSSAVHAAGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTT-LVDLPEDKSKLLLVTPPVARVEP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 447117925  91 KKENTLRIINATNHQLpgDRESLFWVNVKAIPAMEKDQkneNTLQLAIISRIKMFYRPTHLAMapEEAP-AMLRFRRSGS 169
Cdd:PRK09918  83 GQSQQVRFILKSGSPL--NTEHLLRVSFEGVPPKPGGK---NKVVMPIRQDLPVLIQPAALPV--VRDPwKLLVWSISGN 155

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 447117925 170 KLTLINPTPYFI----TVTNMKAGNS-NLPNTMVPPkGE---VSVDIPHAVTGDISFQTINDYG 225
Cdd:PRK09918 156 NLVVSNPSPYVVrlgqQVILLPSGKVvALPKPYILP-GEsltVAITNSKATDTKVRFFPASRYG 218
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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