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Conserved domains on  [gi|447204497|ref|WP_001281753|]
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MULTISPECIES: zinc ribbon domain-containing protein [Bacillus]

Protein Classification

zinc ribbon domain-containing protein( domain architecture ID 12119914)

zinc ribbon domain-containing protein consists of a pair of zinc ribbon domains; similar to Bacillus subtilis protein YvbI

Gene Ontology:  GO:0008270
PubMed:  32851833

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DZR pfam12773
Double zinc ribbon; This family consists of a pair of zinc ribbon domains.
 105-157 1.31e-05

Double zinc ribbon; This family consists of a pair of zinc ribbon domains.


:

Pssm-ID: 432773 [Multi-domain]  Cd Length: 45  Bit Score: 40.44  E-value: 1.31e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 447204497  105 CECGGPLSINDKFCGSCGKPNPMLAvenegetvnCISCNEHIDKNSTYCPVCG 157
Cdd:pfam12773   2 PNCGHPNPPGAKFCPACGTPLKPDR---------CPNCGAPVPPNARFCPYCG 45
 
Name Accession Description Interval E-value
DZR pfam12773
Double zinc ribbon; This family consists of a pair of zinc ribbon domains.
 105-157 1.31e-05

Double zinc ribbon; This family consists of a pair of zinc ribbon domains.


Pssm-ID: 432773 [Multi-domain]  Cd Length: 45  Bit Score: 40.44  E-value: 1.31e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 447204497  105 CECGGPLSINDKFCGSCGKPNPMLAvenegetvnCISCNEHIDKNSTYCPVCG 157
Cdd:pfam12773   2 PNCGHPNPPGAKFCPACGTPLKPDR---------CPNCGAPVPPNARFCPYCG 45
 
Name Accession Description Interval E-value
DZR pfam12773
Double zinc ribbon; This family consists of a pair of zinc ribbon domains.
 105-157 1.31e-05

Double zinc ribbon; This family consists of a pair of zinc ribbon domains.


Pssm-ID: 432773 [Multi-domain]  Cd Length: 45  Bit Score: 40.44  E-value: 1.31e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 447204497  105 CECGGPLSINDKFCGSCGKPNPMLAvenegetvnCISCNEHIDKNSTYCPVCG 157
Cdd:pfam12773   2 PNCGHPNPPGAKFCPACGTPLKPDR---------CPNCGAPVPPNARFCPYCG 45
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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