MULTISPECIES: autotransporter outer membrane beta-barrel domain-containing protein [Enterobacteriaceae]
autotransporter outer membrane beta-barrel domain-containing protein( domain architecture ID 10009446)
autotransporter outer membrane beta-barrel domain-containing protein similar to Escherichia coli uncharacterized protein YhjY
List of domain hits
Name | Accession | Description | Interval | E-value | |||
YhjY super family | cl44262 | Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain [General ... |
93-232 | 8.99e-18 | |||
Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain [General function prediction only]; The actual alignment was detected with superfamily member COG5571: Pssm-ID: 444313 [Multi-domain] Cd Length: 648 Bit Score: 81.46 E-value: 8.99e-18
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Name | Accession | Description | Interval | E-value | |||
YhjY | COG5571 | Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain [General ... |
93-232 | 8.99e-18 | |||
Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain [General function prediction only]; Pssm-ID: 444313 [Multi-domain] Cd Length: 648 Bit Score: 81.46 E-value: 8.99e-18
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Autotransporter | pfam03797 | Autotransporter beta-domain; Secretion of protein products occurs by a number of different ... |
87-208 | 7.41e-06 | |||
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs. Pssm-ID: 461054 [Multi-domain] Cd Length: 255 Bit Score: 45.84 E-value: 7.41e-06
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Autotransporter | smart00869 | Autotransporter beta-domain; Secretion of protein products occurs by a number of different ... |
87-213 | 2.27e-04 | |||
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs. Pssm-ID: 214872 [Multi-domain] Cd Length: 268 Bit Score: 41.40 E-value: 2.27e-04
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Name | Accession | Description | Interval | E-value | |||
YhjY | COG5571 | Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain [General ... |
93-232 | 8.99e-18 | |||
Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain [General function prediction only]; Pssm-ID: 444313 [Multi-domain] Cd Length: 648 Bit Score: 81.46 E-value: 8.99e-18
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Autotransporter | pfam03797 | Autotransporter beta-domain; Secretion of protein products occurs by a number of different ... |
87-208 | 7.41e-06 | |||
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs. Pssm-ID: 461054 [Multi-domain] Cd Length: 255 Bit Score: 45.84 E-value: 7.41e-06
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Autotransporter | smart00869 | Autotransporter beta-domain; Secretion of protein products occurs by a number of different ... |
87-213 | 2.27e-04 | |||
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs. Pssm-ID: 214872 [Multi-domain] Cd Length: 268 Bit Score: 41.40 E-value: 2.27e-04
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Blast search parameters | ||||
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