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Conserved domains on  [gi|485661489|ref|WP_001303128|]
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MULTISPECIES: knotted carbamoyltransferase YgeW [Enterobacteriaceae]

Protein Classification

knotted carbamoyltransferase YgeW( domain architecture ID 11482624)

knotted carbamoyltransferase YgeW is a putative carbamoyltransferase, but no activity can be detected with allantoin or 25 other related compounds, including 20 naturally occurring amino acids, N-acetyl-L-ornithine, N-succinyl-L-ornithine, L-ornithine, oxamate, beta-alanine and putrescine

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK07200 PRK07200
aspartate/ornithine carbamoyltransferase family protein; Validated
1-395 0e+00

aspartate/ornithine carbamoyltransferase family protein; Validated


:

Pssm-ID: 235961 [Multi-domain]  Cd Length: 395  Bit Score: 864.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489   1 MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASA 80
Cdd:PRK07200   1 MKTVNELIKDLNSLTSHMHEKDFLLTWEKTPDELKAVLDVADALRALREENISTKVFNSGLGISVFRDNSTRTRFSYASA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  81 LNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQC 160
Cdd:PRK07200  81 CNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIGIRDDMYIGKGNAYMREVGAAVDDGYKQGVLPQRPTLVNLQC 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 161 DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAK 240
Cdd:PRK07200 161 DIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAK 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 241 NNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEQRTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTR 320
Cdd:PRK07200 241 KNAKASGGSFRQVNSMEEAFKDADIVYPKSWAPYKVMEERTELYRAGDHEGIKALEKELLAQNAQHKDWHCTEEMMKLTK 320
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 485661489 321 DGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK 395
Cdd:PRK07200 321 DGKALYMHCLPADISGVSCKEGEVTESVFDRYRIALYKEASWKPYIIAAMIFLRKYKNPGALLEQLLKEAQPRVK 395
 
Name Accession Description Interval E-value
PRK07200 PRK07200
aspartate/ornithine carbamoyltransferase family protein; Validated
1-395 0e+00

aspartate/ornithine carbamoyltransferase family protein; Validated


Pssm-ID: 235961 [Multi-domain]  Cd Length: 395  Bit Score: 864.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489   1 MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASA 80
Cdd:PRK07200   1 MKTVNELIKDLNSLTSHMHEKDFLLTWEKTPDELKAVLDVADALRALREENISTKVFNSGLGISVFRDNSTRTRFSYASA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  81 LNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQC 160
Cdd:PRK07200  81 CNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIGIRDDMYIGKGNAYMREVGAAVDDGYKQGVLPQRPTLVNLQC 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 161 DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAK 240
Cdd:PRK07200 161 DIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAK 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 241 NNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEQRTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTR 320
Cdd:PRK07200 241 KNAKASGGSFRQVNSMEEAFKDADIVYPKSWAPYKVMEERTELYRAGDHEGIKALEKELLAQNAQHKDWHCTEEMMKLTK 320
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 485661489 321 DGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK 395
Cdd:PRK07200 321 DGKALYMHCLPADISGVSCKEGEVTESVFDRYRIALYKEASWKPYIIAAMIFLRKYKNPGALLEQLLKEAQPRVK 395
ygeW TIGR03316
knotted carbamoyltransferase YgeW; Members of this protein family include the ygeW gene ...
4-393 0e+00

knotted carbamoyltransferase YgeW; Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with selenium-dependent molybdenum hydroxylases.


Pssm-ID: 274517 [Multi-domain]  Cd Length: 391  Bit Score: 723.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489    4 VNELIKDINSL-TSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALN 82
Cdd:TIGR03316   1 IKEYIEKLNKLdFKKMYNNDFFLTWEKTDDELKAVFTVADALRALRENNISTKIFDSGLGISLFRDNSTRTRFSFASACN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489   83 LLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDI 162
Cdd:TIGR03316  81 LLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIGIRDDMYIGKGNAYMHEVSDSVQEGYKDGVLEQRPTLVNLQCDI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  163 DHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNN 242
Cdd:TIGR03316 161 DHPTQSMADMLHLIHEFGGIENLKGKKVAMTWAYSPSYGKPLSVPQGVIGLFTRFGMDVVLAHPEGYEVMPEVEEVAKKN 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  243 AKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEQRTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDG 322
Cdd:TIGR03316 241 AAESGGSFTKTNSMAEAFKDADIVYPKSWAPFAAMEKRTNLYGEGDFAGIDALEKELLAQNATHKDWECTEELMKTTKDG 320
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 485661489  323 EALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQER 393
Cdd:TIGR03316 321 KALYLHCLPADITGVSCEEGEVEASVFDRYRVPLYKEASYKPYIIAAMIFLSKVKNPAATLEKLEEKATPR 391
ArgF COG0078
Ornithine carbamoyltransferase [Amino acid transport and metabolism]; Ornithine ...
16-372 1.85e-105

Ornithine carbamoyltransferase [Amino acid transport and metabolism]; Ornithine carbamoyltransferase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 439848 [Multi-domain]  Cd Length: 310  Bit Score: 313.14  E-value: 1.85e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  16 SHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGK 95
Cdd:COG0078    1 TNLKGRHFLSLLDLTPEELRALLDLAAELKAKRKAGIPHRPLKGKTLAMIFEKPSTRTRVSFEVGMAQLGGHAIYLDPGD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  96 SQIAHGETVRETANMISFCADAIGIRddmylGAGNAYMREVGAAlddgykqgvlpQRPALVNLQCDIDHPTQSMADLAWL 175
Cdd:COG0078   81 SQLGRGESIKDTARVLSRYVDGIMIR-----TFGHETLEELAKY-----------AGVPVINGLTDLFHPCQALADLLTI 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 176 REHFGSlenLKGKKIAMTWAyspsygkPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTS 255
Cdd:COG0078  145 REHFGK---LKGLKVAYVGD-------GNNVANSLLLAAAKLGMDVRIATPEGYEPDPEIVAKAKEIAAESGGSITITHD 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 256 MEEAFKDADIVYPKSWAPykvMEQrtellrandheglkalEKQCLAQNAQHKDWHCTEEMMELTRDgEALYMHCLPADIs 335
Cdd:COG0078  215 PAEAVKGADVVYTDVWVS---MGQ----------------EEEAEERIKAFKPYQVNEELMALAKP-DAIFMHCLPAHR- 273
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 485661489 336 gvsckEGEVTEGVFEKYRIATYKEASWKPYIIAAMIL 372
Cdd:COG0078  274 -----GEEVTDEVIDGPQSVVFDEAENRLHAQKALLA 305
OTCace pfam00185
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain;
189-373 2.08e-36

Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain;


Pssm-ID: 425511 [Multi-domain]  Cd Length: 154  Bit Score: 130.04  E-value: 2.08e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  189 KIAMTWayspsyGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYP 268
Cdd:pfam00185   1 KIAYVG------DGHNNVAHSLIIAAAKLGMDVRLATPKGYPPDPEVLDKAKKIAEKSGGSIEITDDPAEAVKGADVVYT 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  269 KSWAPykvMEQrtellrandheglkalEKQCLAQNAQHKDWHCTEEMMELTRDgEALYMHCLPADisgvscKEGEVTEGV 348
Cdd:pfam00185  75 DVWQS---MGQ----------------EKEREERLKAFKPYQVNEELMKLAKK-DAIFMHCLPAH------RGEEVTDDV 128
                         170       180
                  ....*....|....*....|....*
gi 485661489  349 FEKYRIATYKEASWKPYIIAAMILS 373
Cdd:pfam00185 129 FDGPRSVVFDQAENRLHAQKALLAL 153
 
Name Accession Description Interval E-value
PRK07200 PRK07200
aspartate/ornithine carbamoyltransferase family protein; Validated
1-395 0e+00

aspartate/ornithine carbamoyltransferase family protein; Validated


Pssm-ID: 235961 [Multi-domain]  Cd Length: 395  Bit Score: 864.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489   1 MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASA 80
Cdd:PRK07200   1 MKTVNELIKDLNSLTSHMHEKDFLLTWEKTPDELKAVLDVADALRALREENISTKVFNSGLGISVFRDNSTRTRFSYASA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  81 LNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQC 160
Cdd:PRK07200  81 CNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIGIRDDMYIGKGNAYMREVGAAVDDGYKQGVLPQRPTLVNLQC 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 161 DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAK 240
Cdd:PRK07200 161 DIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAK 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 241 NNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEQRTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTR 320
Cdd:PRK07200 241 KNAKASGGSFRQVNSMEEAFKDADIVYPKSWAPYKVMEERTELYRAGDHEGIKALEKELLAQNAQHKDWHCTEEMMKLTK 320
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 485661489 321 DGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK 395
Cdd:PRK07200 321 DGKALYMHCLPADISGVSCKEGEVTESVFDRYRIALYKEASWKPYIIAAMIFLRKYKNPGALLEQLLKEAQPRVK 395
ygeW TIGR03316
knotted carbamoyltransferase YgeW; Members of this protein family include the ygeW gene ...
4-393 0e+00

knotted carbamoyltransferase YgeW; Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with selenium-dependent molybdenum hydroxylases.


Pssm-ID: 274517 [Multi-domain]  Cd Length: 391  Bit Score: 723.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489    4 VNELIKDINSL-TSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALN 82
Cdd:TIGR03316   1 IKEYIEKLNKLdFKKMYNNDFFLTWEKTDDELKAVFTVADALRALRENNISTKIFDSGLGISLFRDNSTRTRFSFASACN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489   83 LLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDI 162
Cdd:TIGR03316  81 LLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIGIRDDMYIGKGNAYMHEVSDSVQEGYKDGVLEQRPTLVNLQCDI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  163 DHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNN 242
Cdd:TIGR03316 161 DHPTQSMADMLHLIHEFGGIENLKGKKVAMTWAYSPSYGKPLSVPQGVIGLFTRFGMDVVLAHPEGYEVMPEVEEVAKKN 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  243 AKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEQRTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDG 322
Cdd:TIGR03316 241 AAESGGSFTKTNSMAEAFKDADIVYPKSWAPFAAMEKRTNLYGEGDFAGIDALEKELLAQNATHKDWECTEELMKTTKDG 320
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 485661489  323 EALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQER 393
Cdd:TIGR03316 321 KALYLHCLPADITGVSCEEGEVEASVFDRYRVPLYKEASYKPYIIAAMIFLSKVKNPAATLEKLEEKATPR 391
ArgF COG0078
Ornithine carbamoyltransferase [Amino acid transport and metabolism]; Ornithine ...
16-372 1.85e-105

Ornithine carbamoyltransferase [Amino acid transport and metabolism]; Ornithine carbamoyltransferase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 439848 [Multi-domain]  Cd Length: 310  Bit Score: 313.14  E-value: 1.85e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  16 SHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGK 95
Cdd:COG0078    1 TNLKGRHFLSLLDLTPEELRALLDLAAELKAKRKAGIPHRPLKGKTLAMIFEKPSTRTRVSFEVGMAQLGGHAIYLDPGD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  96 SQIAHGETVRETANMISFCADAIGIRddmylGAGNAYMREVGAAlddgykqgvlpQRPALVNLQCDIDHPTQSMADLAWL 175
Cdd:COG0078   81 SQLGRGESIKDTARVLSRYVDGIMIR-----TFGHETLEELAKY-----------AGVPVINGLTDLFHPCQALADLLTI 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 176 REHFGSlenLKGKKIAMTWAyspsygkPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTS 255
Cdd:COG0078  145 REHFGK---LKGLKVAYVGD-------GNNVANSLLLAAAKLGMDVRIATPEGYEPDPEIVAKAKEIAAESGGSITITHD 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 256 MEEAFKDADIVYPKSWAPykvMEQrtellrandheglkalEKQCLAQNAQHKDWHCTEEMMELTRDgEALYMHCLPADIs 335
Cdd:COG0078  215 PAEAVKGADVVYTDVWVS---MGQ----------------EEEAEERIKAFKPYQVNEELMALAKP-DAIFMHCLPAHR- 273
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 485661489 336 gvsckEGEVTEGVFEKYRIATYKEASWKPYIIAAMIL 372
Cdd:COG0078  274 -----GEEVTDEVIDGPQSVVFDEAENRLHAQKALLA 305
PRK04523 PRK04523
N-acetylornithine carbamoyltransferase; Reviewed
21-331 1.95e-45

N-acetylornithine carbamoyltransferase; Reviewed


Pssm-ID: 235304 [Multi-domain]  Cd Length: 335  Bit Score: 159.53  E-value: 1.95e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  21 KDFLLTWEQTPDELKQVLDVAAALKALRaenISTKVFNSGLGIsVFRDNSTRTRFSYASALNLLGLAQQDLDEGKS--QI 98
Cdd:PRK04523   4 KHFLNTQDWSRAELDALLTQAAAFKRNK---LGSALKGKSIAL-VFFNPSLRTRTSFELGAFQLGGHAVVLQPGKDawPI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  99 AHG----------ETVRETANMISFCADAIGIRddmylgagnAYMREVGAALDdgyKQGVLPQRPA------LVNLQcDI 162
Cdd:PRK04523  80 EFElgavmdgeteEHIREVARVLSRYVDLIGVR---------AFPKFVDWSKD---RQDQVLNSFAkystvpVINME-TI 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 163 DHPTQSMADLAWLREHFGSLenLKGKKIAMTWAYSPsygKPL--SVPQGIIGLMTRFGMDVTLAHP-EGYDLIPDVVEVA 239
Cdd:PRK04523 147 THPCQELAHALALQEHFGTT--LRGKKYVLTWTYHP---KPLntAVANSALLIATRLGMDVTLLCPtPDYILDERYMDWA 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 240 KNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEQ--RTELLRandheglkalekqclaqnAQHKDWHCTEEMME 317
Cdd:PRK04523 222 EQNAAESGGSLTVSHDIDSAYAGADVVYAKSWGALPFFGNwePEKPIR------------------DQYQHFIVDERKMA 283
                        330
                 ....*....|....
gi 485661489 318 LTRDGeaLYMHCLP 331
Cdd:PRK04523 284 LTNNG--VFSHCLP 295
orni_carb_tr TIGR00658
ornithine carbamoyltransferase; This family of ornithine carbamoyltransferases (OTCase) is in ...
21-372 7.10e-42

ornithine carbamoyltransferase; This family of ornithine carbamoyltransferases (OTCase) is in a superfamily with the related enzyme aspartate carbamoyltransferase. Most known examples are anabolic, playing a role in arginine biosynthesis, but some are catabolic. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily. [Amino acid biosynthesis, Glutamate family]


Pssm-ID: 129743 [Multi-domain]  Cd Length: 304  Bit Score: 149.04  E-value: 7.10e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489   21 KDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFnSGLGIS-VFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIA 99
Cdd:TIGR00658   1 RHLLSLLDLSPEEIRYLLQLAKKLKKGKKKGKEHKKL-KGKTLAlIFEKPSTRTRVSFEVAAYQLGGHPLYLNPNDLQLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  100 HGETVRETANMISFCADAIGIRddmylgagnaymrevgaalddGYKQGVLpQRPA------LVNLQCDIDHPTQSMADLA 173
Cdd:TIGR00658  80 RGESIKDTARVLSRYVDGIMAR---------------------VYKHEDV-EELAkyasvpVINGLTDLFHPCQALADLL 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  174 WLREHFGSLENLKgkkiaMTWAyspsyGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQV 253
Cdd:TIGR00658 138 TIIEHFGKLKGVK-----VVYV-----GDGNNVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEIAKENGGSVELT 207
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  254 TSMEEAFKDADIVYPKSWAPykvMEQRTEllranDHEGLKALekqclaqnaqhKDWHCTEEMMELTRDgEALYMHCLPAD 333
Cdd:TIGR00658 208 HDPVEAVKGADVIYTDVWVS---MGEEDK-----KEERLKLF-----------RPYQVNEELMELAKP-EVIFMHCLPAH 267
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 485661489  334 isgvscKEGEVTEGVFEKYRIATYKEASWKPYIIAAMIL 372
Cdd:TIGR00658 268 ------RGEEVTDEVIEGPHSIVFDQAENRLHAQKAVMV 300
PRK00779 PRK00779
ornithine carbamoyltransferase; Provisional
21-350 5.97e-41

ornithine carbamoyltransferase; Provisional


Pssm-ID: 234835 [Multi-domain]  Cd Length: 304  Bit Score: 146.78  E-value: 5.97e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  21 KDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVF-NSGLGIsVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIA 99
Cdd:PRK00779   5 RHFLSLDDLSPEELEELLDLAAELKKKRKAGEPHPPLkGKTLAM-IFEKPSTRTRVSFEVGMAQLGGHAIFLSPRDTQLG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 100 HGETVRETANMISFCADAIGIRDdmylgagnaymrevgaalddgYKQGVL---------PqrpaLVNLQCDIDHPTQSMA 170
Cdd:PRK00779  84 RGEPIEDTARVLSRYVDAIMIRT---------------------FEHETLeelaeystvP----VINGLTDLSHPCQILA 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 171 DLAWLREHFGSLenlKGKKIAmtW-------AYSpsygkplsvpqgiigLM---TRFGMDVTLAHPEGYDLIPDVVEvak 240
Cdd:PRK00779 139 DLLTIYEHRGSL---KGLKVA--WvgdgnnvANS---------------LLlaaALLGFDLRVATPKGYEPDPEIVE--- 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 241 NNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPykvMEQRTEllranDHEGLKALekqclaqnaqhKDWHCTEEMMELTR 320
Cdd:PRK00779 196 KIAKETGASIEVTHDPKEAVKGADVVYTDVWVS---MGQEAE-----AEERLKAF-----------APYQVNEELMALAK 256
                        330       340       350
                 ....*....|....*....|....*....|
gi 485661489 321 DgEALYMHCLPADisgvscKEGEVTEGVFE 350
Cdd:PRK00779 257 P-DAIFMHCLPAH------RGEEVTDEVID 279
OTCace pfam00185
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain;
189-373 2.08e-36

Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain;


Pssm-ID: 425511 [Multi-domain]  Cd Length: 154  Bit Score: 130.04  E-value: 2.08e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  189 KIAMTWayspsyGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYP 268
Cdd:pfam00185   1 KIAYVG------DGHNNVAHSLIIAAAKLGMDVRLATPKGYPPDPEVLDKAKKIAEKSGGSIEITDDPAEAVKGADVVYT 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  269 KSWAPykvMEQrtellrandheglkalEKQCLAQNAQHKDWHCTEEMMELTRDgEALYMHCLPADisgvscKEGEVTEGV 348
Cdd:pfam00185  75 DVWQS---MGQ----------------EKEREERLKAFKPYQVNEELMKLAKK-DAIFMHCLPAH------RGEEVTDDV 128
                         170       180
                  ....*....|....*....|....*
gi 485661489  349 FEKYRIATYKEASWKPYIIAAMILS 373
Cdd:pfam00185 129 FDGPRSVVFDQAENRLHAQKALLAL 153
OTCace_N pfam02729
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
22-177 4.92e-32

Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;


Pssm-ID: 460665 [Multi-domain]  Cd Length: 140  Bit Score: 117.91  E-value: 4.92e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489   22 DFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHG 101
Cdd:pfam02729   1 HFLSLEDLSREEIEALLDLAAELKEARKRGKKLPLLKGKTVALLFEEPSTRTRVSFEVAAKRLGGHVIYLSSSDIQLSSG 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 485661489  102 ETVRETANMISFCADAIGIRddmylGAGNAYMREVGAAlddgykqgvlpQRPALVNLQCDIDHPTQSMADLAWLRE 177
Cdd:pfam02729  81 ESLADTARVLSRYVDAIVIR-----HFGHEDLEELAEY-----------ASVPVINAGGDHEHPTQALADLLTIRE 140
PRK02102 PRK02102
ornithine carbamoyltransferase; Validated
16-373 3.80e-31

ornithine carbamoyltransferase; Validated


Pssm-ID: 179366 [Multi-domain]  Cd Length: 331  Bit Score: 121.15  E-value: 3.80e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  16 SHLHEKDFlltweqTPDELKQVLDVAAALKALRAENISTKVFnSGLGIS-VFRDNSTRTRFSYASALNLLGLAQQDLDEG 94
Cdd:PRK02102   9 SFLKLLDF------TPEEIEYLIDLSIELKAAKKAGIEHQYL-EGKNIAlIFEKTSTRTRCAFEVAAIDLGAHVTYLGPN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  95 KSQIAHGETVRETANMISFCADAIGIRddmylgagnaymrevgaalddGYKQ----------GVlpqrPALVNLQcDIDH 164
Cdd:PRK02102  82 DSQLGKKESIEDTARVLGRMYDGIEYR---------------------GFKQeiveelakysGV----PVWNGLT-DEWH 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 165 PTQSMADLAWLREHFGSLENLKgkkiamtWAYspsygkplsvpqgiIG---------LM---TRFGMDVTLAHPEGYDLI 232
Cdd:PRK02102 136 PTQMLADFMTMKEHFGPLKGLK-------LAY--------------VGdgrnnmansLMvggAKLGMDVRICAPKELWPE 194
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 233 PDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVY---------PKSWapykvmEQRTELLrandheglkalekqclaqn 303
Cdd:PRK02102 195 EELVALAREIAKETGAKITITEDPEEAVKGADVIYtdvwvsmgeEDEW------EERIKLL------------------- 249
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 304 aqhKDWHCTEEMMELTRDGEALYMHCLPA----------DISGVSCKEG-EVTEGVFEKYRIATYKEASWKPYIIAAMIL 372
Cdd:PRK02102 250 ---KPYQVNMDLMKATGNPDVIFMHCLPAfhdtetkvgkEIAEKYGLKGlEVTDEVFESKYSIVFDEAENRMHTIKAVMV 326

                 .
gi 485661489 373 S 373
Cdd:PRK02102 327 A 327
PLN02342 PLN02342
ornithine carbamoyltransferase
20-386 7.58e-26

ornithine carbamoyltransferase


Pssm-ID: 177976 [Multi-domain]  Cd Length: 348  Bit Score: 106.80  E-value: 7.58e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  20 EKDFLLTWEQTPDELKQVLDVAAALKA-LRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQI 98
Cdd:PLN02342  45 PKHFLHIDDFDKEEILGLLDRAKEVKAlLKSGDRSFQPFKGKSMAMIFTKPSMRTRVSFETGFFLLGGHALYLGPDDIQL 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  99 AHGETVRETANMISFCADAIgirddmylgagnayMREVGAALD--DGYKQGVLPqrpaLVNLQCDIDHPTQSMADLAWLR 176
Cdd:PLN02342 125 GKREETRDIARVLSRYNDII--------------MARVFAHQDvlDLAEYSSVP----VINGLTDYNHPCQIMADALTII 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 177 EHFGSLENLK------GKKIAMTWAYspsygkplsvpqgiigLMTRFGMDVTLAHPEGYDLIPDVVEvaknNAKASGGSF 250
Cdd:PLN02342 187 EHIGRLEGTKvvyvgdGNNIVHSWLL----------------LAAVLPFHFVCACPKGYEPDAKTVE----KARAAGISK 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 251 RQVTS-MEEAFKDADIVYPKSWAPykvMEQRTEL-LRANDHEGLKALEKqclaqnaqhkdwhcteeMMELTRDGeALYMH 328
Cdd:PLN02342 247 IEITNdPAEAVKGADVVYTDVWAS---MGQKEEAeKRKKAFQGFQVNEA-----------------LMKLAGPQ-AYFMH 305
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 485661489 329 CLPADisgvscKEGEVTEGVFEKYRIATYKEASwkpyiiaamilSRKYAKPGALLEQL 386
Cdd:PLN02342 306 CLPAE------RGVEVTDGVMEAPNSIVFPQAE-----------NRMHAQNAIMLHQL 346
PRK04284 PRK04284
ornithine carbamoyltransferase; Provisional
18-373 2.74e-24

ornithine carbamoyltransferase; Provisional


Pssm-ID: 235269 [Multi-domain]  Cd Length: 332  Bit Score: 102.13  E-value: 2.74e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  18 LHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQ 97
Cdd:PRK04284   4 LRNRSFLTLLDFTPKEIEYLLDLSEDLKRAKYAGIEVQKLKGKNIALIFEKDSTRTRCAFEVAAYDQGAHVTYLGPTGSQ 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  98 IAHGETVRETANMISFCADAIGIRddmylgagnaymrevgaalddGYKQ----------GVlpqrpALVNLQCDIDHPTQ 167
Cdd:PRK04284  84 MGKKESTKDTARVLGGMYDGIEYR---------------------GFSQrtvetlaeysGV-----PVWNGLTDEDHPTQ 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 168 SMADLAWLREHF-GSLENLKgkkiaMTW--------AYSPSYGKPLsvpqgiiglmtrFGMDVTLAHPEGYDLIPDVVEV 238
Cdd:PRK04284 138 VLADFLTAKEHLkKPYKDIK-----FTYvgdgrnnvANALMQGAAI------------MGMDFHLVCPKELNPDDELLNK 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 239 AKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWA----PYKVMEQRTELLRAndheglkalekqclaqnaqhkdWHCTEE 314
Cdd:PRK04284 201 CKEIAAETGGKITITDDIDEGVKGSDVIYTDVWVsmgePDEVWEERIKLLKP----------------------YQVNKE 258
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 315 MMELTRDGEALYMHCLPA--DISGVSCK---------EGEVTEGVFEKYRIATYKEASWKPYIIAAMILS 373
Cdd:PRK04284 259 MMKKTGNPNAIFEHCLPSfhDLDTKVGKeifekyglkEMEVTDEVFESKASVVFDEAENRMHTIKAVMVA 328
pyrB PRK00856
aspartate carbamoyltransferase catalytic subunit;
24-267 4.24e-21

aspartate carbamoyltransferase catalytic subunit;


Pssm-ID: 234849 [Multi-domain]  Cd Length: 305  Bit Score: 92.44  E-value: 4.24e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  24 LLTWEQ-TPDELKQVLDVAAALKALRAENISTKVFNSGLGI-SVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHG 101
Cdd:PRK00856   8 LLSIEDlSREEIELLLDTAEEFKEVLRREVKKVPLLRGKTVaNLFFEPSTRTRLSFELAAKRLGADVINFSASTSSVSKG 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 102 ETVRETANMIS-FCADAIGIRDDMylgAGNAYM--REVGAAL---DDGYKQgvlpqrpalvnlqcdidHPTQSMADLAWL 175
Cdd:PRK00856  88 ETLADTIRTLSaMGADAIVIRHPQ---SGAARLlaESSDVPVinaGDGSHQ-----------------HPTQALLDLLTI 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 176 REHFGSLENLkgkKIAmtwayspsygkplsvpqgIIG-------------LMTRFGMDVTLAHPEGydLIPDVVEvaknn 242
Cdd:PRK00856 148 REEFGRLEGL---KVA------------------IVGdikhsrvarsniqALTRLGAEVRLIAPPT--LLPEGMP----- 199
                        250       260
                 ....*....|....*....|....*
gi 485661489 243 akasggSFRQVTSMEEAFKDADIVY 267
Cdd:PRK00856 200 ------EYGVHTDLDEVIEDADVVM 218
PRK14805 PRK14805
ornithine carbamoyltransferase; Provisional
21-350 3.73e-20

ornithine carbamoyltransferase; Provisional


Pssm-ID: 237819 [Multi-domain]  Cd Length: 302  Bit Score: 89.75  E-value: 3.73e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  21 KDFLLTWEQTPDELKQVLDVAAALKALRAEnistkvFNSGL-GISV---FRDNSTRTRFSYASALNLLG-----LAQQDL 91
Cdd:PRK14805   2 KHLLSIKELTQQQLLDLLALAKTIKANPAE------YRQALaGKSVvmlFEKPSLRTRVSFDIGINKLGghclyLDQQNG 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  92 DEGKSqiahgETVRETANMISFCADAIGIRDDMYlgagnaymrevgAALDDGYKQGVLPqrpaLVNLQCDIDHPTQSMAD 171
Cdd:PRK14805  76 ALGKR-----ESVADFAANLSCWADAIVARVFSH------------STIEQLAEHGSVP----VINALCDLYHPCQALAD 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 172 LAWLREHFGSLENLKgkkiamtWAYspsYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFr 251
Cdd:PRK14805 135 FLTLAEQFGDVSKVK-------LAY---VGDGNNVTHSLMYGAAILGATMTVICPPGHFPDGQIVAEAQELAAKSGGKL- 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 252 QVTSMEEAFKDADIVYPKSWAPykvMEQRTELlrandhEGLKalekqclaqnAQHKDWHCTEEMMELTrdGEALYMHCLP 331
Cdd:PRK14805 204 VLTSDIEAIEGHDAIYTDTWIS---MGDDTPL------AEIK----------AKFAPYQVNKALMEKA--GATFVMHCQP 262
                        330
                 ....*....|....*....
gi 485661489 332 ADisgvscKEGEVTEGVFE 350
Cdd:PRK14805 263 AH------RGVEITSEVMD 275
PRK03515 PRK03515
ornithine carbamoyltransferase subunit I; Provisional
16-373 2.45e-19

ornithine carbamoyltransferase subunit I; Provisional


Pssm-ID: 179587 [Multi-domain]  Cd Length: 336  Bit Score: 88.23  E-value: 2.45e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  16 SHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNsGLGIS-VFRDNSTRTRFSYASALNLLGLAQQDLDEG 94
Cdd:PRK03515   2 NQFYQRHFLRLLDFTPAELNSLLQLAAKLKADKKNGKEEQKLT-GKNIAlIFEKDSTRTRCSFEVAAYDQGARVTYLGPS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  95 KSQIAHGETVRETANMISFCADAIGIRddmylgagnaymrevgaalddGYKQGVL---------PQRPALVNLQcdidHP 165
Cdd:PRK03515  81 GSQIGHKESIKDTARVLGRMYDGIQYR---------------------GYGQEIVetlaeyagvPVWNGLTNEF----HP 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 166 TQSMADLAWLREHfgslenLKGKKI-AMTWAY----SPSYGKPLSVPQGIIglmtrfGMDVTLAHPEGYDLIPDVVEVAK 240
Cdd:PRK03515 136 TQLLADLLTMQEH------LPGKAFnEMTLAYagdaRNNMGNSLLEAAALT------GLDLRLVAPKACWPEAALVTECR 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 241 NNAKASGGSFRQVTSMEEAFKDADIVYPKSWA----PYKVMEQRTELLRandheglkalekqclaqnaqhkDWHCTEEMM 316
Cdd:PRK03515 204 ALAQKNGGNITLTEDIAEGVKGADFIYTDVWVsmgePKEVWAERIALLR----------------------PYQVNSKMM 261
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 485661489 317 ELTRDGEALYMHCLPA-----DISGVSCKEG-------EVTEGVFEKYRIATYKEASWKPYIIAAMILS 373
Cdd:PRK03515 262 QLTGNPQVKFLHCLPAfhddqTTLGKKMAEEyglhggmEVTDEVFESAHSIVFDQAENRLHTIKAVMVA 330
PRK01713 PRK01713
ornithine carbamoyltransferase; Provisional
17-373 1.14e-17

ornithine carbamoyltransferase; Provisional


Pssm-ID: 167263 [Multi-domain]  Cd Length: 334  Bit Score: 83.11  E-value: 1.14e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  17 HLHEKDFLLTWEQTPDELKQVLDVAAALKalRAENISTKVFN-SGLGIS-VFRDNSTRTRFSYASALNLLGLAQQDLDEG 94
Cdd:PRK01713   4 NLKNRHLLSLVNHTEREIKYLLDLSRDLK--RAKYAGTEQQRlKGKNIAlIFEKTSTRTRCAFEVAAYDQGAQVTYIDPN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  95 KSQIAHGETVRETANMISFCADAIGIRddmylgagnaymrevgaalddGYKQGVLPQRP-----ALVNLQCDIDHPTQSM 169
Cdd:PRK01713  82 SSQIGHKESMKDTARVLGRMYDAIEYR---------------------GFKQSIVNELAeyagvPVFNGLTDEFHPTQML 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 170 ADLAWLREHFGSLENlkgkkiAMTWAYSPSYGKPLSVPQGIIGlmTRFGMDVTLAHPEGydLIPD--VVEVAKNNAKASG 247
Cdd:PRK01713 141 ADVLTMIENCDKPLS------EISYVYIGDARNNMGNSLLLIG--AKLGMDVRICAPKA--LLPEasLVEMCEKFAKESG 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 248 GSFRQVTSMEEAFKDADIVYPKSWA----PYKVMEQRTELLRAndheglkalekqclaqnaqhkdWHCTEEMMELTRDGE 323
Cdd:PRK01713 211 ARITVTDDIDKAVKGVDFVHTDVWVsmgePLETWGERIKLLMP----------------------YQVTPELMKRTGNPK 268
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 485661489 324 ALYMHCLPAdISGVSCKEG--------------EVTEGVFEKYRIATYKEASWKPYIIAAMILS 373
Cdd:PRK01713 269 VKFMHCLPA-FHNSETKVGrqiaekypelangiEVTEDVFESPMNIAFEQAENRMHTIKAVMVA 331
PRK12562 PRK12562
ornithine carbamoyltransferase subunit F; Provisional
16-373 2.42e-17

ornithine carbamoyltransferase subunit F; Provisional


Pssm-ID: 105755  Cd Length: 334  Bit Score: 82.41  E-value: 2.42e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  16 SHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFnSGLGIS-VFRDNSTRTRFSYASALNLLGLAQQDLDEG 94
Cdd:PRK12562   2 SGFYKKHFLKLLDFTPAELNSLLQLAAKLKADKKNGKEVARL-TGKNIAlIFEKDSTRTRCSFEVAAYDQGARVTYLGPS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  95 KSQIAHGETVRETANMISFCADAIgirddMYLGAGnaymREVGAALDDgyKQGVlPQRPALVNLQcdidHPTQSMADLAW 174
Cdd:PRK12562  81 GSQIGHKESIKDTARVLGRMYDGI-----QYRGHG----QEVVETLAE--YAGV-PVWNGLTNEF----HPTQLLADLLT 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 175 LREHfgslenLKGKKI-AMTWAYSPSYGKPLSvpQGIIGLMTRFGMDVTLAHPEGydLIPDVVEVAKNNAKA--SGGSFR 251
Cdd:PRK12562 145 MQEH------LPGKAFnEMTLVYAGDARNNMG--NSMLEAAALTGLDLRLVAPQA--CWPEASLVAECSALAqkHGGKIT 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 252 QVTSMEEAFKDADIVYPKSWA----PYKVMEQRTELLRandheglkalekqclaqnaqhkDWHCTEEMMELTRDGEALYM 327
Cdd:PRK12562 215 LTEDIAAGVKGADFIYTDVWVsmgePKEKWAERIALLR----------------------GYQVNSKMMALTGNPQVKFL 272
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 485661489 328 HCLPA---DISGVSCKEG---------EVTEGVFEKYRIATYKEASWKPYIIAAMILS 373
Cdd:PRK12562 273 HCLPAfhdDQTTLGKKMAkefglhggmEVTDEVFESPASIVFDQAENRMHTIKAVMVA 330
PRK11891 PRK11891
aspartate carbamoyltransferase; Provisional
24-267 4.56e-10

aspartate carbamoyltransferase; Provisional


Pssm-ID: 183362 [Multi-domain]  Cd Length: 429  Bit Score: 61.03  E-value: 4.56e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  24 LLTWEQ-TPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQD-LDEGKSQIAHG 101
Cdd:PRK11891  90 LLSVDQfSRDSVEALFRVADVMQPIARRQKISRVLEGAVLGNLFFEASTRTRVSFGAAFCRLGGSVCDtTGFTFSSMAKG 169
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 102 ETVRETANMISFCADAIGIRDDMyLGAGNAYMREVGAALDDGykqGVLPQrpalvnlqcdiDHPTQSMADLAWLREHFGS 181
Cdd:PRK11891 170 ESIYDTSRVMSGYVDALVIRHPE-QGSVAEFARATNLPVING---GDGPG-----------EHPSQALLDLYTIQREFSR 234
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 182 LENL-KGKKIAMTWAYspSYGKPLsvpQGIIGLMTRF-GMDVTLAHPEGYDLIPDVVEVAKNNakasGGSFRQVTSMEEA 259
Cdd:PRK11891 235 LGKIvDGAHIALVGDL--KYGRTV---HSLVKLLALYrGLKFTLVSPPTLEMPAYIVEQISRN----GHVIEQTDDLAAG 305

                 ....*...
gi 485661489 260 FKDADIVY 267
Cdd:PRK11891 306 LRGADVVY 313
PRK08192 PRK08192
aspartate carbamoyltransferase; Provisional
32-267 1.04e-07

aspartate carbamoyltransferase; Provisional


Pssm-ID: 169269 [Multi-domain]  Cd Length: 338  Bit Score: 53.19  E-value: 1.04e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  32 DELKQVLDVAAALK--ALRAEniSTKVFNSGLGISVFRDNSTRTRFSYASALNLL-GLAQQDLDEGKSQIAHGETVRETA 108
Cdd:PRK08192  17 DAIQRIFNVADRMEpyALREK--RTRVLEGAILGNLFFEPSTRTRVSFGCAFNLLgGHVRETTGMASSSLSKGESLYDTA 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 109 NMISFCADAIGIRD-DMYLGAGNAYMREV----GAaldDGYKQgvlpqrpalvnlqcdidHPTQSMADLAWLR---EHFG 180
Cdd:PRK08192  95 RVLSTYSDVIAMRHpDAGSVKEFAEGSRVpvinGG---DGSNE-----------------HPTQALLDLFTIQkelAHAG 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 181 slENLKGKKIAMTWAYspSYGKPLSVPQGIIGLMTRfgMDVTLAHPEGYDLiPDVVEVAKNNAkasGGSFRQVTSMEEAF 260
Cdd:PRK08192 155 --RGIDGMHIAMVGDL--KFGRTVHSLSRLLCMYKN--VSFTLVSPKELAM-PDYVISDIENA---GHKITITDQLEGNL 224

                 ....*..
gi 485661489 261 KDADIVY 267
Cdd:PRK08192 225 DKADILY 231
PLN02527 PLN02527
aspartate carbamoyltransferase
34-267 5.50e-06

aspartate carbamoyltransferase


Pssm-ID: 178142 [Multi-domain]  Cd Length: 306  Bit Score: 47.82  E-value: 5.50e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  34 LKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGK--SQIAHGETVRETANMI 111
Cdd:PLN02527  14 LELLFEVAREMEKVERGSPGSQMLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAGefSSAAKGETLEDTIRTV 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 112 SFCADAIGIRddmYLGAGNAymREVGAALD-------DGYKQgvlpqrpalvnlqcdidHPTQSMADLAWLREHFGSLEN 184
Cdd:PLN02527  94 EGYSDIIVLR---HFESGAA--RRAAATAEipvinagDGPGQ-----------------HPTQALLDVYTIQREIGRLDG 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 185 LkgkKIAMTWAYspSYGKPLsvpQGIIGLMTRFGmDVTLahpegYDLIPDVVEVA---KNNAKASGGSFRQVTSMEEAFK 261
Cdd:PLN02527 152 I---KVGLVGDL--ANGRTV---RSLAYLLAKYE-DVKI-----YFVAPDVVKMKddiKDYLTSKGVEWEESSDLMEVAS 217

                 ....*.
gi 485661489 262 DADIVY 267
Cdd:PLN02527 218 KCDVLY 223
PRK14804 PRK14804
ornithine carbamoyltransferase; Provisional
24-284 6.33e-06

ornithine carbamoyltransferase; Provisional


Pssm-ID: 173265 [Multi-domain]  Cd Length: 311  Bit Score: 47.71  E-value: 6.33e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489  24 LLTWEQTPD-ELKQVLDVAAALKALRAeNISTKVFNSGLGIsVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGE 102
Cdd:PRK14804   9 LISWEDWSDsEILDLLDFAVHVKKNRV-NYAGHMSGRSLAM-LFQKTSTRTRVSFEVAMTEMGGHGIYLDWMASNFQLSD 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 103 T---VRETANMISFCADAIGIRDDMYLgagnaymrevgaalddgYKQGvlPQRPaLVNLQCDIDHPTQSMADLAWLrehf 179
Cdd:PRK14804  87 IdleARYLSRNVSVIMARLKKHEDLLV-----------------MKNG--SQVP-VINGCDNMFHPCQSLADIMTI---- 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485661489 180 gSLE--NLKGKKIAMTWayspsYGKPLSVPQGIIGLMTRFGMDVTLAHP--EGYDLIPDVVEVAKnnakaSGGSFRQVTS 255
Cdd:PRK14804 143 -ALDspEIPLNQKQLTY-----IGVHNNVVNSLIGITAALGIHLTLVTPiaAKENIHAQTVERAK-----KKGTLSWEMN 211
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 485661489 256 MEEAFKDADIVYPKSWAPYKVM---------EQRTELL 284
Cdd:PRK14804 212 LHKAVSHADYVYTDTWLDMEFFndpsyadkkKQRMELM 249
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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