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Conserved domains on  [gi|485666430|ref|WP_001307699|]
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fimbrial chaperone [Escherichia coli]

Protein Classification

PRK11385 family protein( domain architecture ID 11485332)

PRK11385 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK11385 PRK11385
fimbrial chaperone;
1-236 1.23e-163

fimbrial chaperone;


:

Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 451.51  E-value: 1.23e-163
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   1 MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPL 80
Cdd:PRK11385   1 MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  81 LAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQL 160
Cdd:PRK11385  81 LAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQL 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 485666430 161 RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP 236
Cdd:PRK11385 161 RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP 236
 
Name Accession Description Interval E-value
PRK11385 PRK11385
fimbrial chaperone;
1-236 1.23e-163

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 451.51  E-value: 1.23e-163
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   1 MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPL 80
Cdd:PRK11385   1 MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  81 LAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQL 160
Cdd:PRK11385  81 LAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQL 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 485666430 161 RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP 236
Cdd:PRK11385 161 RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP 236
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-228 1.08e-53

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 172.87  E-value: 1.08e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   8 LALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEAST-----------V 76
Cdd:COG3121    5 LRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATapfvvtpplfrL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  77 papllaapplillKPGTTGTLRLLRTeSDILPVDRETLFELSIASVPSGKVENQS---VKVAMRSVFKLFWRPEGLPGDP 153
Cdd:COG3121   85 -------------EPGKSQTVRIIRT-GPPLPQDRESLFRLNVDEIPPKDASEEGkntLQIALRTRIKLFYRPAGLKGSP 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 154 LEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVN--GKALSN-VGVVPPKSQRQTSWCQAI---APCHVAWRAINDYGGL 227
Cdd:COG3121  151 EDAAEKLTWSLVGNGLTVTNPGPYYVTLSDLSLGagGKKLKKgLGMVLPGSTRRWPLPAGAslaAGGKVTWATINDYGGA 230


                 .
gi 485666430 228 S 228
Cdd:COG3121  231 V 231
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 28-150 3.79e-19

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 79.94  E-value: 3.79e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   28 VVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEAS-----------TVpapllaapplillKPGTTGT 96
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAkapfivtpplfRL-------------EPGQEQV 67

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 485666430   97 LRLLRTESDiLPVDRETLFELSIASVPSGKVENQS---VKVAMRSVFKLFWRPEGLP 150
Cdd:pfam00345  68 LRIYTTGPP-LPTDRESLFWLNVLEIPPKDKPKGGqngLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK11385 PRK11385
fimbrial chaperone;
1-236 1.23e-163

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 451.51  E-value: 1.23e-163
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   1 MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPL 80
Cdd:PRK11385   1 MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  81 LAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQL 160
Cdd:PRK11385  81 LAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQL 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 485666430 161 RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP 236
Cdd:PRK11385 161 RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP 236
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-228 1.08e-53

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 172.87  E-value: 1.08e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   8 LALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEAST-----------V 76
Cdd:COG3121    5 LRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATapfvvtpplfrL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  77 papllaapplillKPGTTGTLRLLRTeSDILPVDRETLFELSIASVPSGKVENQS---VKVAMRSVFKLFWRPEGLPGDP 153
Cdd:COG3121   85 -------------EPGKSQTVRIIRT-GPPLPQDRESLFRLNVDEIPPKDASEEGkntLQIALRTRIKLFYRPAGLKGSP 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 154 LEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVN--GKALSN-VGVVPPKSQRQTSWCQAI---APCHVAWRAINDYGGL 227
Cdd:COG3121  151 EDAAEKLTWSLVGNGLTVTNPGPYYVTLSDLSLGagGKKLKKgLGMVLPGSTRRWPLPAGAslaAGGKVTWATINDYGGA 230


                 .
gi 485666430 228 S 228
Cdd:COG3121  231 V 231
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
25-225 1.19e-52

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 169.88  E-value: 1.19e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  25 QAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRTES 104
Cdd:PRK15192  21 QAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGRWPGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTGA 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 105 DiLPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQV 184
Cdd:PRK15192 101 P-LPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNPTPYYVTLFLL 179

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 485666430 185 SVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAWRAINDYG 225
Cdd:PRK15192 180 RANERAQDNAGVVAPFATRQTDWCRHTVRCTVRWQSINDYG 220
PRK15195 PRK15195
molecular chaperone FimC;
3-235 1.12e-34

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 123.43  E-value: 1.12e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   3 NTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNT-SQESWLINSkinrptrWAGGEASTVPAPLL 81
Cdd:PRK15195   2 MTKIKLGMIIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNShTNERYLVNS-------WIENSSGVKEKSFI 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  82 AAPPLILLKPGTTGTLRLLRTeSDILPVDRETLFELSIASVPS---GKVENQSV-KVAMRSVFKLFWRPEGLPGDPLEAY 157
Cdd:PRK15195  75 VTPPLFVSEPKSENTLRIIYA-GPPLAADRESLFWMNVKAIPSvdkNALEGRNVlQLAILSRIKLFVRPINLQELPEEAP 153

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 485666430 158 QQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTswCQAIAPCHVAWRAINDYGGLSAKKEQNL 235
Cdd:PRK15195 154 DTLKFSRSGNHLKVHNPSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIP--LPSGVQGKLKFQTVNDYGAVTPAREVNL 229
PRK15295 PRK15295
fimbrial assembly chaperone;
10-231 2.66e-32

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 117.35  E-value: 2.66e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  10 LLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrptrwAGGEASTVPAPLLAAPPLILL 89
Cdd:PRK15295   3 IKKSVLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLS-----VVDPQVTNKQAFIITPPLFRL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  90 KPGTTGTLRLLRTESDiLPVDRETLFELSIASVPS--GKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAY-QQLRWTRNS 166
Cdd:PRK15295  78 DAGQKNSIRVIRSGAP-LPADRESMYWLNIKGIPSidDNASANRVEISINTQIKLIYRPPALTKSTPDSQsQQLKWQTAG 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 485666430 167 QGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPC-HVAWRAINDYgGLSAKK 231
Cdd:PRK15295 157 DVITVNNPTPYYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHgTVTWRLISDY-GMSLEP 221
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 14-233 5.79e-29

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 108.71  E-value: 5.79e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  14 AVLSLLVAGELQ--AGVVVGGTRFIFPADRESISILLTNTSQESWLINSkinrptrWAGGEASTVPAPLLAAPPLI---L 88
Cdd:PRK15299   8 GLLCCLLCGSLAhaAGINIGTTRVIFHGDAKDASISISNSDNVPYLIQS-------WAQSISETGASGDAPFMVTPplfR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  89 LKPGTTGTLRLLRTESDiLPVDRETLFELSIASVPSGKVENQ--SVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNS 166
Cdd:PRK15299  81 LNGGQKNVLRIIRTGGN-LPEDRESLYWLDIKSIPSSNPDNKhnTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQG 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 485666430 167 QGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSwCQAIAPCHVAWRAINDYGGLSAKKEQ 233
Cdd:PRK15299 160 RTLTVKNPTPYYMNFATLSVGSQKVKAPRYVAPFGNAQYT-LPAAASGPIAWSIINDFGGTGPEHKQ 225
PRK09926 PRK09926
fimbrial chaperone;
1-227 1.07e-28

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 108.27  E-value: 1.07e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   1 MTNTWNRLALLIFAVlSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrpTRWAGGEASTVPAPL 80
Cdd:PRK09926   1 MFFNTKHTTALCFAT-CMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLD--TGDDNAEPGSIKVPF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  81 LAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVP----SGKVENQS-VKVAMRSVFKLFWRPEGLPGDPLE 155
Cdd:PRK09926  78 TATPPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPpkpdAEKVANQSlLQLAFRTRIKLFYRPDGLKGNPSE 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 156 AYQQLRWTRNSQG----VQLTNPTPYYINL--IQVSVNGKALS-NVGVVPPKSQRQ---TSWCQAIAPCHVAWRAINDYG 225
Cdd:PRK09926 158 APLALKWSWAGSEgkasLRVTNPTPYYVSFssGDLEAGGKRYPvDSKMIAPFSDESmkvKGLSGKASSGKVHFYAINDFG 237


                 ..
gi 485666430 226 GL 227
Cdd:PRK09926 238 GA 239
PRK15208 PRK15208
molecular chaperone LpfB;
13-225 6.62e-27

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 103.45  E-value: 6.62e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  13 FAVLSLLVAGE--LQAGVVVGGTRFIFPADRESISILLTNTSQ-ESWLINSkinrptrWAGGEASTVPAPLLAAPPLILL 89
Cdd:PRK15208   6 FTALALALIAQnsFAGGVALSSTRVIYDGSKKEASLTVNNKSKtEEFLIQS-------WIDDANGNKKTPFIITPPLFKL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  90 KPGTTGTLRLLRTEsDILPVDRETLFELSIASVPSGKVENQS---VKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNS 166
Cdd:PRK15208  79 DPTKNNVLRIVNIT-NTLPQDRESVYWINVKAIPAKSEDAENknvLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAG 157

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 167 QGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCH-VAWRAINDYG 225
Cdd:PRK15208 158 NQIKVENPSAFNLTFNQFYANGRDIEKAGMVPAKGSLNIELPAGTGKVSeVKYNIINDFG 217
PRK15211 PRK15211
fimbrial chaperone;
6-226 1.17e-26

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 102.59  E-value: 1.17e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   6 NRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQES-----WLINSKINrptrwaGGEASTVPAPL 80
Cdd:PRK15211   2 KMMKWGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTyggqvWIDNTTQG------SSTVYMVPAPP 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  81 LAAPPlillkPGTTGTLRLLRTEsDILPVDRETLFELSIASVPSGKVENQS--VKVAMRSVFKLFWRPEGLPGDPLEAYQ 158
Cdd:PRK15211  76 FFKVR-----PKEKQIIRIMKTD-SALPKDRESLFWLNVQEIPPKPKASEGnvLAVALNTQVKLIYRPKALKEGRENAEK 149

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 485666430 159 QLRWTRNSQGVQLTNPTPYYINLIQVSVNGKAL-------SNVGVVPPKSqrQTSWCQAIAPCHVAWRAINDYGG 226
Cdd:PRK15211 150 NLQIIHRGGETYLKNPTPYYFAVTGVKLNGQPVklsdrvmNEIAQLAPFS--EVSLGKLSLNGTVTVQAVNDWGG 222
lfpB PRK15290
fimbrial chaperone;
26-235 5.39e-23

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 93.52  E-value: 5.39e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  26 AGVVVGGTRFIFPADRESISILLTNTSQE-SWLINSKINRPTRWAGGEAS-TVPAPLLAApplillKPGTTGTLRLLRTE 103
Cdd:PRK15290  37 AGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDPFNKEDKSKAPfTVIPPVSRL------EPSQEKVLRIIHTK 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 104 SDILPVDRETLFELSIASVP---SGKVENqSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYIN 180
Cdd:PRK15290 111 GVSLPDDRESVFWLNIKNIPpsaSNKATN-SLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRNLIAENPNPIHIS 189

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 485666430 181 LIQVSVNGKALSnVGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNL 235
Cdd:PRK15290 190 VMDVIVDGHDVP-LNMIRPFETLTLPLPANSAGGQMTWRFINDYGAVSDPIKMTL 243
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 7-231 2.30e-21

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 88.67  E-value: 2.30e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   7 RLALLIFAV-LSLLVAGelqAGVVVGGTRFIFPADRESISILLTNTSQ------ESWLINSKINRPTRWaggeastvpap 79
Cdd:PRK15188  10 RLLLLLSAAgLSFAAQA---GGIALGATRVIYPQGSKQTSLPIINSSAsnvfliQSWVANADGSRSTDF----------- 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  80 lLAAPPLILLKPGTTGTLRLLRTESDiLPVDRETLFELSIASVPS---GKVENQSVKVAMRSVFKLFWRPEGLPGDPLEA 156
Cdd:PRK15188  76 -IITPPLFVIQPKKENILRIMYVGPS-LPTDRESVFYLNSKAIPSvdkNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHA 153

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 485666430 157 YQQLRwTRNSQG-VQLTNPTPYYINLIQVSVNGKALSNVgVVPPKSqrqtSWCQAIAPCHVAWRAINDYGGLSAKK 231
Cdd:PRK15188 154 PSTLR-CRNERGqLTITNPSPYYVSMVELYSAGKKLPNT-MVPPKG----AITLPATPGQVSLRTVNDFGATTPAR 223
PRK15249 PRK15249
fimbrial chaperone;
1-207 2.64e-19

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 83.70  E-value: 2.64e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   1 MTNTWNRLAL-LIFAVLSLLVAGE-LQAGVVVGGTRFIFPADRESISILLTNTSQ-----ESWLINSKINrptrwAGGEA 73
Cdd:PRK15249   1 MKMDTRHSALyYLIVFLFLALPATaSWASVTILGSRIIYPSTASSVDVQLKNNDAipyivQTWFDDGDMN-----TSPEN 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  74 STvPAPLLAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQS----VKVAMRSVFKLFWRPEGL 149
Cdd:PRK15249  76 SS-AMPFIATPPVFRIQPKAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSgqnkMLVMLRSRIKLFYRPDGL 154

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 485666430 150 --PGDPLEAYQ--QLRWTRNSQGVQLTNPTPYYINL--IQVSVNGKAL-SNVGVVPPKSQrQTSW 207
Cdd:PRK15249 155 gkPDNLAKKLQikTVNKGSGKSGIVIVNPQPWFASLsnLNVKVNGASYnLDADMIAPFSS-QTWW 218
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 28-150 3.79e-19

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 79.94  E-value: 3.79e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   28 VVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEAS-----------TVpapllaapplillKPGTTGT 96
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAkapfivtpplfRL-------------EPGQEQV 67

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 485666430   97 LRLLRTESDiLPVDRETLFELSIASVPSGKVENQS---VKVAMRSVFKLFWRPEGLP 150
Cdd:pfam00345  68 LRIYTTGPP-LPTDRESLFWLNVLEIPPKDKPKGGqngLQLALRSRIKLFYRPAGLA 123
PRK15224 PRK15224
pili assembly chaperone PapD;
12-228 2.37e-18

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 80.94  E-value: 2.37e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  12 IFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrptrwagGEASTVPAPLLAAPPLILLKP 91
Cdd:PRK15224  14 VYAAEQKLNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVK-------AADKSSPAPFLVMPPLFRLEA 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  92 GTTGTLRLLRTESDiLPVDRETLFELSIASVP--------SGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWT 163
Cdd:PRK15224  87 NQQSQLRIVRTGGD-MPTDRETLQWVCIKAVPpenepsdtQAKGATLDLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWV 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 485666430 164 RNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAiAPCHVAWRAINDYGGLS 228
Cdd:PRK15224 166 ETGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGS-AHGDIEWRVITDFGGES 229
PRK15246 PRK15246
fimbrial assembly chaperone;
22-225 4.99e-17

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 76.92  E-value: 4.99e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  22 GELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLIllKPGTTGTLRLLR 101
Cdd:PRK15246   6 GPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKM--QPGELRTLRLLL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 102 TESDILPVDRETLFELSIASVPSgkvENQSVKVAMRSV-------FKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNP 174
Cdd:PRK15246  84 SSRQQLATDRESLFWLNIYQIPP---VTQDIKNHPRKLvlplrlrLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNP 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 485666430 175 TPYYINLIQVSVNGKALSNVgVVPPKSQRQTSWCQAIAP-CHVAWRAINDYG 225
Cdd:PRK15246 161 TSWYMSLTLTMDNKKSIGDI-MVAPKTALDVPLTRSPTPgASINYAVINDSG 211
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 25-201 1.33e-14

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 70.47  E-value: 1.33e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  25 QAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLIllkPGTTGTLRLLRTES 104
Cdd:PRK15253  32 HAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARV---AAESGQQIKIKKMP 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 105 DILPVDRETLFELSIASVPSGKVENQS---VKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYINL 181
Cdd:PRK15253 109 NSLPDNKESLFYLNVLDIPPNSQENAGknvLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVIMKNDTANWITV 188

                        170       180
                 ....*....|....*....|.
gi 485666430 182 IQVSV-NGKALSNVGVVPPKS 201
Cdd:PRK15253 189 TDVKAgNTKINDQTIMLPPLS 209
PRK15218 PRK15218
fimbrial assembly chaperone;
15-225 5.39e-14

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 68.85  E-value: 5.39e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  15 VLSLLVAGELQ---AGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKP 91
Cdd:PRK15218   4 MIALCLACAAMpawSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVAANS 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  92 GTTGTLRLLrteSDILPVDRETLFELSIASVPSGKVENQS---VKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQG 168
Cdd:PRK15218  84 GQQLKIKKL---ANNLPGDRESLFYLNVLDIPPNSDENKDkniIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGS 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 485666430 169 VQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSwcQAIAPCHVAWRAINDYG 225
Cdd:PRK15218 161 ISVKNNSANWITIPEIKAKSKVNKETLLLAPWSSQSIT--TTVVVNSYTVTLIDDSG 215
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 26-231 7.18e-13

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 65.95  E-value: 7.18e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  26 AGVVVGGTRFIFPADRESISILLTNTSQESWLINSKinrptrWAGGEASTVPAPLLAAPPLILLKPGTTGTLRL--LRTE 103
Cdd:PRK15254  16 AAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQS------WVTDADGVRTDALMALPPLQRIDAGQKSQVRItqVRGL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 104 SDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEG-LPGDPLEAYQQLRWTRNSQGVQLTNPTPYYINLI 182
Cdd:PRK15254  90 TDKLPQDRETLFWFNVRGVPPKPEDDNVLQLAMQSQLKLFYRPKAiIRSSSDQPERKLTAERNAGHLTLRNPTPYYITVA 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 485666430 183 QVSVNG----KALSNVGVVPPKSQRQTswcQAIAPCHVA--WRA-INDYGGLSAKK 231
Cdd:PRK15254 170 WLGADRshrlSGFREGVMVPPLGSLPL---KAVLPAETRtlWVGyIDDYGGLQMNR 222
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 171-228 8.89e-13

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 61.12  E-value: 8.89e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 485666430  171 LTNPTPYYINLIQVSVNGKALS---NVGVVPPKSQRQ-TSWCQAIAPCHVAWRAINDYGGLS 228
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKElalDPGMVAPFSSQTfAGLPAPAAGGTVSYTYINDYGGIV 62
PRK15285 PRK15285
fimbrial chaperone StfD;
14-201 2.16e-12

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 64.80  E-value: 2.16e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  14 AVLSLLVAG--ELQAGVVVGGTRFIFPADRESISILLTNT-SQESWLINSkinrptrWAGGEAST-VPAPLLAAPPLILL 89
Cdd:PRK15285  11 AVLLLLLGGygSAQAAIAPDRTRLVFRGEDKSISVDLKNAnSKLPYLAQS-------WVEDEKGVkITSPLIVVPPVQRI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  90 KPGTTGTLRLLRTES-DILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWT--RNS 166
Cdd:PRK15285  84 EPSAIGQVKIQGMPAlASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITlqRQG 163

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 485666430 167 QGVQLTNPTPYYINLIQVSVNGKALSNVG----VVPPKS 201
Cdd:PRK15285 164 NGYQVSNPTGYYVVLSNASNRMDGTPARGfsplVIAPKS 202
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 2-179 5.72e-12

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 63.65  E-value: 5.72e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430   2 TNTWNRLALlifaVLSLLVAGEL--QAGVVVGGTRFIFPADRESISILLTNTSQ------ESWLINSKINRPTRWaggea 73
Cdd:PRK15274   4 TNHFKRQAL----IASVLLAAPLvsHSAIVPDRTRVIFNGNENSITVTLKNGNAtlpylaQAWLEDDKFAKDTRY----- 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  74 stvpapLLAAPPLILLKPGTTGTLRLLRTESDI-LPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPG- 151
Cdd:PRK15274  75 ------FTALPPLQRIEPKSDGQVKVQPLPAAAsLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARq 148

                        170       180       190
                 ....*....|....*....|....*....|
gi 485666430 152 -DPLEAYQ-QLRWTRNSQGVQLTNPTPYYI 179
Cdd:PRK15274 149 vDKTHPWQtKLTLTYQGDGVIFDNPTPFYL 178
PRK15233 PRK15233
fimbrial chaperone SefB;
27-184 9.89e-05

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 42.40  E-value: 9.89e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  27 GVVVGGTRFIFPADRESISILLTNTSQESWLINSKInrptrWAGGEASTVPAPLLAAPPLILLKPGTTgtLRLLRTeSDI 106
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQV-----YNDDKSSKAPFIVTPPILKVESNARTR--LKVIPT-SNL 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430 107 LPVDRETLFELSIASVP----------SGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTP 176
Cdd:PRK15233 113 FNKNEESLYWLCVKGVPplndnesnnkNNITTNLNVNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTS 192


                 ....*...
gi 485666430 177 YYINLIQV 184
Cdd:PRK15233 193 SYVNIANI 200
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 91-183 9.59e-04

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 39.25  E-value: 9.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 485666430  91 PGTTGTLRLLRTESDilPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDpLEAYQQLRWTRNSQGVQ 170
Cdd:PRK09918  82 PGQSQQVRFILKSGS--PLNTEHLLRVSFEGVPPKPGGKNKVVMPIRQDLPVLIQPAALPVV-RDPWKLLVWSISGNNLV 158

                         90
                 ....*....|...
gi 485666430 171 LTNPTPYYINLIQ 183
Cdd:PRK09918 159 VSNPSPYVVRLGQ 171
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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