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Conserved domains on  [gi|485762272|ref|WP_001387472|]
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MULTISPECIES: ash family protein [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Phage_ASH super family cl11183
Ash protein family; This family was identified by Iyer and colleagues. It includes the Ash ...
 8-48 3.47e-07

Ash protein family; This family was identified by Iyer and colleagues. It includes the Ash protein from bacteriophage P4.


The actual alignment was detected with superfamily member pfam10554:

Pssm-ID: 431354  Cd Length: 105  Bit Score: 44.12  E-value: 3.47e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 485762272    8 NLYFLSSSMVAQAGQALAWPVSDDAGIPTPVWAIT-NERRNS 48
Cdd:pfam10554  40 NPAMDLFSMVAQAGQPKGWPVSFVAGYANPVWVTAhKEIGVS 81
 
Name Accession Description Interval E-value
Phage_ASH pfam10554
Ash protein family; This family was identified by Iyer and colleagues. It includes the Ash ...
 8-48 3.47e-07

Ash protein family; This family was identified by Iyer and colleagues. It includes the Ash protein from bacteriophage P4.


Pssm-ID: 431354  Cd Length: 105  Bit Score: 44.12  E-value: 3.47e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 485762272    8 NLYFLSSSMVAQAGQALAWPVSDDAGIPTPVWAIT-NERRNS 48
Cdd:pfam10554  40 NPAMDLFSMVAQAGQPKGWPVSFVAGYANPVWVTAhKEIGVS 81
 
Name Accession Description Interval E-value
Phage_ASH pfam10554
Ash protein family; This family was identified by Iyer and colleagues. It includes the Ash ...
 8-48 3.47e-07

Ash protein family; This family was identified by Iyer and colleagues. It includes the Ash protein from bacteriophage P4.


Pssm-ID: 431354  Cd Length: 105  Bit Score: 44.12  E-value: 3.47e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 485762272    8 NLYFLSSSMVAQAGQALAWPVSDDAGIPTPVWAIT-NERRNS 48
Cdd:pfam10554  40 NPAMDLFSMVAQAGQPKGWPVSFVAGYANPVWVTAhKEIGVS 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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