|
Name |
Accession |
Description |
Interval |
E-value |
| PRK05370 |
PRK05370 |
argininosuccinate synthase; Validated |
10-452 |
0e+00 |
|
argininosuccinate synthase; Validated
Pssm-ID: 235434 Cd Length: 447 Bit Score: 1004.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 10 ATILQHVPVGKKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLIDCRLQLALEG 89
Cdd:PRK05370 2 STILKHLPVGQRVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRAQLVAEG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 90 IAAIQCGAFHISTGGVPYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQN 169
Cdd:PRK05370 82 IAAIQCGAFHISTGGVTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPELKIYKPWLDQD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 170 FIDELGGRAEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNAGIKIVDPIMGVAFWKEEVEIKPEEVTVRF 249
Cdd:PRK05370 162 FIDELGGRAEMSEFLIAHGFDYKMSVEKAYSTDSNMLGATHEAKDLEHLNSGIKIVNPIMGVAFWDEDVEIKAEEVTVRF 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 250 EEGVPVALNGQRFDNPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYR 329
Cdd:PRK05370 242 EQGRPVALNGKTFSDPVELMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYR 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 330 INGLRLGRLLYQGRWFDSQALMLRETAQRWVAKAITGEVTLELRRGNDYTIMNTESPNLTYEAERLTMEKG-DSMFTPMD 408
Cdd:PRK05370 322 INGRRLGRLLYQGRWFDPQALMLRESLQRWVASAITGEVTLELRRGNDYSILNTVSPNLTYKPERLSMEKVeSAAFSPDD 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 487912961 409 RIGQLTMRNLDITDTRAKLGIYTDAGLLSIGQGSAVPQLDNKKK 452
Cdd:PRK05370 402 RIGQLTMRNLDITDTREKLFIYAKTGLLSSGEASGLPQLENLEN 445
|
|
| argG |
TIGR00032 |
argininosuccinate synthase; argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a ... |
21-428 |
0e+00 |
|
argininosuccinate synthase; argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria. [Amino acid biosynthesis, Glutamate family]
Pssm-ID: 199987 Cd Length: 394 Bit Score: 591.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 21 KVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPdEDDYDAIPKKAEQYGAVKARLIDCRLQLALE-GIAAIQCGAFH 99
Cdd:TIGR00032 1 KVVLAYSGGLDTSVCLKWLREKGYEVIAYTADVGQP-EEDIDAIPEKALEYGAENHYTIDAREEFVKDyGFAAIQANAFY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 100 ISTggvpYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNFIdelggRAE 179
Cdd:TIGR00032 80 EGT----YPLSTALARPLIAKKLVEAAKKEGANAVAHGCTGKGNDQERFERSIRLLNPDLKVIAPWRDLNFT-----REE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 180 MSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNaGIKIVDPIMGVAFWKEEVEIKPEEVTVRFEEGVPVALNG 259
Cdd:TIGR00032 151 EIEYAIQCGIPYPMSKEKPYSIDENLWGRSIEAGILEDPS-TEPPEDIYMWTKFPDEATPDEPEVVTIDFEQGVPVALNG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 260 QRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLL 339
Cdd:TIGR00032 230 VSLD-PVELILEANEIAGKHGVGRIDIIENRIIGLKSREIYEAPGAALLIIAHRDLETLTLTRDVLEFKDIVEEQYSELI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 340 YQGRWFDSQALMLReTAQRWVAKAITGEVTLELRRGNDYTIMNTeSPNLTYEAERLTMEKgDSMFTPMDRIGQLTMRNLD 419
Cdd:TIGR00032 309 YQGLWFDPLAEALD-AFIRKTQERVTGTVRVKLFKGNAIVIGRT-SPYSLYDEELVSMEK-DDVFDPRDAIGFITMRGLQ 385
|
....*....
gi 487912961 420 ITDTRAKLG 428
Cdd:TIGR00032 386 IKDYREKKK 394
|
|
| ArgG |
COG0137 |
Argininosuccinate synthase [Amino acid transport and metabolism]; Argininosuccinate synthase ... |
20-426 |
0e+00 |
|
Argininosuccinate synthase [Amino acid transport and metabolism]; Argininosuccinate synthase is part of the Pathway/BioSystem: Arginine biosynthesis
Pssm-ID: 439907 Cd Length: 397 Bit Score: 516.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQK-GAEPYAYTANLGQpdEDDYDAIPKKAEQYGAVKARLIDCRLQLALEGIA-AIQCGA 97
Cdd:COG0137 1 KKVVLAYSGGLDTSVIIPWLKEKyGYEVIAVTADVGQ--GEDLEAIEEKALKLGASKAYVVDAREEFVEDYVFpAIKANA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 98 FHistGGVpYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNfideLGGR 177
Cdd:COG0137 79 LY---EGK-YPLGTALARPLIAKKLVEIAREEGADAVAHGCTGKGNDQVRFELAIRALAPDLKIIAPWREWD----LKSR 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 178 AEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNAGIKivDPIMGVAFWKEEVEIKPEEVTVRFEEGVPVAL 257
Cdd:COG0137 151 EEEIEYAEEHGIPVPATKEKPYSIDENLWGRSIEGGELEDPWNEPP--EDAYEWTVSPEDAPDEPEYVTITFEKGVPVAL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 258 NGQRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGR 337
Cdd:COG0137 229 NGEKLS-PVELIEELNEIGGKHGVGRIDIVENRLVGIKSRGVYEAPGATILITAHRALESLTLDRETLHFKDILDQKYAE 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 338 LLYQGRWFDSQALMLRETAQRwVAKAITGEVTLELRRGNdYTIMNTESPNLTYEAERLTMEKGDSmFTPMDRIGQLTMRN 417
Cdd:COG0137 308 LVYNGLWFSPLREALDAFIDE-TQKRVTGTVRLKLYKGN-ATVVGRKSPYSLYDEDLATYEEDDV-FDQKDAEGFIKLFG 384
|
....*....
gi 487912961 418 LDITDTRAK 426
Cdd:COG0137 385 LPLRVAARV 393
|
|
| ASS |
cd01999 |
argininosuccinate_synthase (ASS); Argininosuccinate synthase (ASS; EC 6.3.4.5) is a urea cycle ... |
20-419 |
9.42e-149 |
|
argininosuccinate_synthase (ASS); Argininosuccinate synthase (ASS; EC 6.3.4.5) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate. In humans, a defect in the ASS gene causes citrullinemia, a genetic disease characterized by severe vomiting spells and mental retardation. ASS is a homotetrameric enzyme of about 400 amino-acid residues. An arginine residue seems to be important for the enzyme's catalytic mechanism. The sequences of ASS from various prokaryotes, archaeabacteria and eukaryotes show significant similarity.
Pssm-ID: 467503 Cd Length: 386 Bit Score: 428.49 E-value: 9.42e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQK-GAEPYAYTANLGQPDEDDydAIPKKAEQYGAVKARLIDCRLQLALEGIA-AIQCGA 97
Cdd:cd01999 1 KKVVLAYSGGLDTSVILKWLKEEyGYEVIAFTADLGQGDEEE--EIEEKALKLGAVKVYVVDLREEFAEDYIFpAIKANA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 98 FHISTggvpYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNFidelGGR 177
Cdd:cd01999 79 IYEGR----YPLGTALARPLIAKKLVEVAREEGATAVAHGCTGKGNDQVRFELAIKALAPDLKVIAPWRDWNF----LTR 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 178 AEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNAGikivdPIMGVAFW---KEEVEIKPEEVTVRFEEGVP 254
Cdd:cd01999 151 AEEIAYAKKHGIPVPVTKKKPYSIDENLWGRSYEGGDLEDPWNE-----PPEDAFEWtvsPEKAPDEPEYVTIEFEKGVP 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 255 VALNGQRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLR 334
Cdd:cd01999 226 VAVNGEKLD-PVELIEKLNEIAGRHGVGRIDIVENRLVGIKSRGVYEAPGATLLIKAHRDLEDLTLDREVLHFKDIVSRK 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 335 LGRLLYQGRWFDSQALMLRETAQRWvAKAITGEVTLELRRGNDYtIMNTESPNLTYEAERLTMEKGDSmFTPMDRIGQLT 414
Cdd:cd01999 305 YAELVYNGLWFDPLREALEAFIDKT-QERVTGEVRLKLYKGNVI-VVGRESPNSLYSEELATYEEGDG-FDQKDAEGFIK 381
|
....*
gi 487912961 415 MRNLD 419
Cdd:cd01999 382 IHGLQ 386
|
|
| Arginosuc_synth |
pfam00764 |
Arginosuccinate synthase; This family contains a PP-loop motif. |
24-411 |
5.01e-69 |
|
Arginosuccinate synthase; This family contains a PP-loop motif.
Pssm-ID: 279148 Cd Length: 386 Bit Score: 224.53 E-value: 5.01e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 24 IAFSGGLDTSAALLWMKQK-GAEPYAYTANLGQPdEDDYDAIPKKAEQYGAVKARLIDCRLQLALEGI-AAIQCGAFHIS 101
Cdd:pfam00764 2 LAYSGGLDTSVCIPWLKEQgGYEVIAVAVDVGQG-GEDIDEAREKALKLGAVKHYVIDAKEEFVEDYIfPAIQANALYED 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 102 TggvpYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNFIdelggRAEMS 181
Cdd:pfam00764 81 R----YPLGTALARPLIAKKLVEAAKKEGASAVAHGCTGKGNDQVRFEVSFRSLAPDLKVIAPVRDPNLT-----REEEI 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 182 QFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNagikiVDPIMGVAFWKEEVEI---KPEEVTVRFEEGVPVALN 258
Cdd:pfam00764 152 EYAEEHGIPIPVTKKSPYSIDENLWGRSIEAGILEDPW-----NAPPEDIYEWTKDPAKapdEPDIVEIGFEKGVPVALD 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 259 GQRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL---HIAYERLVTgihnEDTIEQY-RINGLR 334
Cdd:pfam00764 227 GEPVS-PLELIEKLNEIAGAHGVGRIDIVEDRLVGIKSREIYEAPAATVLitaHRDLENLTL----TREVLRFkRIVDQK 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 335 LGRLLYQGRWFDSqalmLRETAQRWVAKA---ITGEVTLELRRGNdYTIMNTESPNLTYEAERLTMEKGDSmFTPMDRIG 411
Cdd:pfam00764 302 WAELVYDGLWFSP----LKEALDAFIDKTqerVTGTVRVKLHKGS-AIVLGRRSPYSLYDEELVSYDEGDT-FDQTDATG 375
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK05370 |
PRK05370 |
argininosuccinate synthase; Validated |
10-452 |
0e+00 |
|
argininosuccinate synthase; Validated
Pssm-ID: 235434 Cd Length: 447 Bit Score: 1004.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 10 ATILQHVPVGKKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLIDCRLQLALEG 89
Cdd:PRK05370 2 STILKHLPVGQRVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRAQLVAEG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 90 IAAIQCGAFHISTGGVPYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQN 169
Cdd:PRK05370 82 IAAIQCGAFHISTGGVTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPELKIYKPWLDQD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 170 FIDELGGRAEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNAGIKIVDPIMGVAFWKEEVEIKPEEVTVRF 249
Cdd:PRK05370 162 FIDELGGRAEMSEFLIAHGFDYKMSVEKAYSTDSNMLGATHEAKDLEHLNSGIKIVNPIMGVAFWDEDVEIKAEEVTVRF 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 250 EEGVPVALNGQRFDNPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYR 329
Cdd:PRK05370 242 EQGRPVALNGKTFSDPVELMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYR 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 330 INGLRLGRLLYQGRWFDSQALMLRETAQRWVAKAITGEVTLELRRGNDYTIMNTESPNLTYEAERLTMEKG-DSMFTPMD 408
Cdd:PRK05370 322 INGRRLGRLLYQGRWFDPQALMLRESLQRWVASAITGEVTLELRRGNDYSILNTVSPNLTYKPERLSMEKVeSAAFSPDD 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 487912961 409 RIGQLTMRNLDITDTRAKLGIYTDAGLLSIGQGSAVPQLDNKKK 452
Cdd:PRK05370 402 RIGQLTMRNLDITDTREKLFIYAKTGLLSSGEASGLPQLENLEN 445
|
|
| argG |
TIGR00032 |
argininosuccinate synthase; argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a ... |
21-428 |
0e+00 |
|
argininosuccinate synthase; argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria. [Amino acid biosynthesis, Glutamate family]
Pssm-ID: 199987 Cd Length: 394 Bit Score: 591.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 21 KVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPdEDDYDAIPKKAEQYGAVKARLIDCRLQLALE-GIAAIQCGAFH 99
Cdd:TIGR00032 1 KVVLAYSGGLDTSVCLKWLREKGYEVIAYTADVGQP-EEDIDAIPEKALEYGAENHYTIDAREEFVKDyGFAAIQANAFY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 100 ISTggvpYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNFIdelggRAE 179
Cdd:TIGR00032 80 EGT----YPLSTALARPLIAKKLVEAAKKEGANAVAHGCTGKGNDQERFERSIRLLNPDLKVIAPWRDLNFT-----REE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 180 MSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNaGIKIVDPIMGVAFWKEEVEIKPEEVTVRFEEGVPVALNG 259
Cdd:TIGR00032 151 EIEYAIQCGIPYPMSKEKPYSIDENLWGRSIEAGILEDPS-TEPPEDIYMWTKFPDEATPDEPEVVTIDFEQGVPVALNG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 260 QRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLL 339
Cdd:TIGR00032 230 VSLD-PVELILEANEIAGKHGVGRIDIIENRIIGLKSREIYEAPGAALLIIAHRDLETLTLTRDVLEFKDIVEEQYSELI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 340 YQGRWFDSQALMLReTAQRWVAKAITGEVTLELRRGNDYTIMNTeSPNLTYEAERLTMEKgDSMFTPMDRIGQLTMRNLD 419
Cdd:TIGR00032 309 YQGLWFDPLAEALD-AFIRKTQERVTGTVRVKLFKGNAIVIGRT-SPYSLYDEELVSMEK-DDVFDPRDAIGFITMRGLQ 385
|
....*....
gi 487912961 420 ITDTRAKLG 428
Cdd:TIGR00032 386 IKDYREKKK 394
|
|
| ArgG |
COG0137 |
Argininosuccinate synthase [Amino acid transport and metabolism]; Argininosuccinate synthase ... |
20-426 |
0e+00 |
|
Argininosuccinate synthase [Amino acid transport and metabolism]; Argininosuccinate synthase is part of the Pathway/BioSystem: Arginine biosynthesis
Pssm-ID: 439907 Cd Length: 397 Bit Score: 516.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQK-GAEPYAYTANLGQpdEDDYDAIPKKAEQYGAVKARLIDCRLQLALEGIA-AIQCGA 97
Cdd:COG0137 1 KKVVLAYSGGLDTSVIIPWLKEKyGYEVIAVTADVGQ--GEDLEAIEEKALKLGASKAYVVDAREEFVEDYVFpAIKANA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 98 FHistGGVpYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNfideLGGR 177
Cdd:COG0137 79 LY---EGK-YPLGTALARPLIAKKLVEIAREEGADAVAHGCTGKGNDQVRFELAIRALAPDLKIIAPWREWD----LKSR 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 178 AEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNAGIKivDPIMGVAFWKEEVEIKPEEVTVRFEEGVPVAL 257
Cdd:COG0137 151 EEEIEYAEEHGIPVPATKEKPYSIDENLWGRSIEGGELEDPWNEPP--EDAYEWTVSPEDAPDEPEYVTITFEKGVPVAL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 258 NGQRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGR 337
Cdd:COG0137 229 NGEKLS-PVELIEELNEIGGKHGVGRIDIVENRLVGIKSRGVYEAPGATILITAHRALESLTLDRETLHFKDILDQKYAE 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 338 LLYQGRWFDSQALMLRETAQRwVAKAITGEVTLELRRGNdYTIMNTESPNLTYEAERLTMEKGDSmFTPMDRIGQLTMRN 417
Cdd:COG0137 308 LVYNGLWFSPLREALDAFIDE-TQKRVTGTVRLKLYKGN-ATVVGRKSPYSLYDEDLATYEEDDV-FDQKDAEGFIKLFG 384
|
....*....
gi 487912961 418 LDITDTRAK 426
Cdd:COG0137 385 LPLRVAARV 393
|
|
| ASS |
cd01999 |
argininosuccinate_synthase (ASS); Argininosuccinate synthase (ASS; EC 6.3.4.5) is a urea cycle ... |
20-419 |
9.42e-149 |
|
argininosuccinate_synthase (ASS); Argininosuccinate synthase (ASS; EC 6.3.4.5) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate. In humans, a defect in the ASS gene causes citrullinemia, a genetic disease characterized by severe vomiting spells and mental retardation. ASS is a homotetrameric enzyme of about 400 amino-acid residues. An arginine residue seems to be important for the enzyme's catalytic mechanism. The sequences of ASS from various prokaryotes, archaeabacteria and eukaryotes show significant similarity.
Pssm-ID: 467503 Cd Length: 386 Bit Score: 428.49 E-value: 9.42e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQK-GAEPYAYTANLGQPDEDDydAIPKKAEQYGAVKARLIDCRLQLALEGIA-AIQCGA 97
Cdd:cd01999 1 KKVVLAYSGGLDTSVILKWLKEEyGYEVIAFTADLGQGDEEE--EIEEKALKLGAVKVYVVDLREEFAEDYIFpAIKANA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 98 FHISTggvpYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNFidelGGR 177
Cdd:cd01999 79 IYEGR----YPLGTALARPLIAKKLVEVAREEGATAVAHGCTGKGNDQVRFELAIKALAPDLKVIAPWRDWNF----LTR 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 178 AEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNAGikivdPIMGVAFW---KEEVEIKPEEVTVRFEEGVP 254
Cdd:cd01999 151 AEEIAYAKKHGIPVPVTKKKPYSIDENLWGRSYEGGDLEDPWNE-----PPEDAFEWtvsPEKAPDEPEYVTIEFEKGVP 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 255 VALNGQRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLR 334
Cdd:cd01999 226 VAVNGEKLD-PVELIEKLNEIAGRHGVGRIDIVENRLVGIKSRGVYEAPGATLLIKAHRDLEDLTLDREVLHFKDIVSRK 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 335 LGRLLYQGRWFDSQALMLRETAQRWvAKAITGEVTLELRRGNDYtIMNTESPNLTYEAERLTMEKGDSmFTPMDRIGQLT 414
Cdd:cd01999 305 YAELVYNGLWFDPLREALEAFIDKT-QERVTGEVRLKLYKGNVI-VVGRESPNSLYSEELATYEEGDG-FDQKDAEGFIK 381
|
....*
gi 487912961 415 MRNLD 419
Cdd:cd01999 382 IHGLQ 386
|
|
| PRK00509 |
PRK00509 |
argininosuccinate synthase; Provisional |
20-402 |
1.01e-69 |
|
argininosuccinate synthase; Provisional
Pssm-ID: 234785 Cd Length: 399 Bit Score: 226.48 E-value: 1.01e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQK-GAEPYAYTANLGQpdEDDYDAIPKKAEQYGAVKARLIDCRLQLALEGIA-AIQCGA 97
Cdd:PRK00509 3 KKVVLAYSGGLDTSVIIKWLKETyGCEVIAFTADVGQ--GEELEPIREKALKSGASEIYVEDLREEFVRDYVFpAIRANA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 98 FhistggvpYFNTTPLG----RAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERF---YrYGLltNPNLKIYKPWLDQNF 170
Cdd:PRK00509 81 L--------YEGKYPLGtalaRPLIAKKLVEIARKEGADAVAHGCTGKGNDQVRFelgI-AAL--APDLKVIAPWREWDL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 171 idelGGRAEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEylnagikivDPimgvafWKEEVEI---------- 240
Cdd:PRK00509 150 ----KSREELIAYAEEHGIPIPVTKKSPYSIDANLWHRSIEGGILE---------DP------WNEPPEDvyewtvsped 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 241 ---KPEEVTVRFEEGVPVALNGQRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAY---ER 314
Cdd:PRK00509 211 apdEPEYVEIEFEKGVPVAINGEALS-PAELIEELNELAGKHGIGRIDIVENRLVGIKSRGVYETPGGTILIKAHralES 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 315 LV---TGIHNEDTIEQyringlRLGRLLYQGRWFDS-----QALMlrETAQRWVakaiTGEVTLELRRGNdYTIMNTESP 386
Cdd:PRK00509 290 LTldrEVAHFKDELEP------KYAELVYNGLWFSPlrealQAFI--DETQEHV----TGEVRLKLYKGN-AIVVGRKSP 356
|
410
....*....|....*.
gi 487912961 387 NLTYEAERLTMEKGDS 402
Cdd:PRK00509 357 NSLYDEDLATYEEDDV 372
|
|
| Arginosuc_synth |
pfam00764 |
Arginosuccinate synthase; This family contains a PP-loop motif. |
24-411 |
5.01e-69 |
|
Arginosuccinate synthase; This family contains a PP-loop motif.
Pssm-ID: 279148 Cd Length: 386 Bit Score: 224.53 E-value: 5.01e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 24 IAFSGGLDTSAALLWMKQK-GAEPYAYTANLGQPdEDDYDAIPKKAEQYGAVKARLIDCRLQLALEGI-AAIQCGAFHIS 101
Cdd:pfam00764 2 LAYSGGLDTSVCIPWLKEQgGYEVIAVAVDVGQG-GEDIDEAREKALKLGAVKHYVIDAKEEFVEDYIfPAIQANALYED 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 102 TggvpYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNFIdelggRAEMS 181
Cdd:pfam00764 81 R----YPLGTALARPLIAKKLVEAAKKEGASAVAHGCTGKGNDQVRFEVSFRSLAPDLKVIAPVRDPNLT-----REEEI 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 182 QFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNagikiVDPIMGVAFWKEEVEI---KPEEVTVRFEEGVPVALN 258
Cdd:pfam00764 152 EYAEEHGIPIPVTKKSPYSIDENLWGRSIEAGILEDPW-----NAPPEDIYEWTKDPAKapdEPDIVEIGFEKGVPVALD 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 259 GQRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL---HIAYERLVTgihnEDTIEQY-RINGLR 334
Cdd:pfam00764 227 GEPVS-PLELIEKLNEIAGAHGVGRIDIVEDRLVGIKSREIYEAPAATVLitaHRDLENLTL----TREVLRFkRIVDQK 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 335 LGRLLYQGRWFDSqalmLRETAQRWVAKA---ITGEVTLELRRGNdYTIMNTESPNLTYEAERLTMEKGDSmFTPMDRIG 411
Cdd:pfam00764 302 WAELVYDGLWFSP----LKEALDAFIDKTqerVTGTVRVKLHKGS-AIVLGRRSPYSLYDEELVSYDEGDT-FDQTDATG 375
|
|
| PLN00200 |
PLN00200 |
argininosuccinate synthase; Provisional |
20-418 |
7.88e-61 |
|
argininosuccinate synthase; Provisional
Pssm-ID: 177791 Cd Length: 404 Bit Score: 203.44 E-value: 7.88e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQK-GAEPYAYTANLGQPDEDdYDAIPKKAEQYGAVKARLIDCRLQLALEGI-AAIQCGA 97
Cdd:PLN00200 6 NKVVLAYSGGLDTSVILKWLRENyGCEVVCFTADVGQGIEE-LEGLEAKAKASGAKQLVVKDLREEFVRDYIfPCLRANA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 98 FHISTggvpYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYR--YGLltNPNLKIYKPWLDQnfidELG 175
Cdd:PLN00200 85 IYEGK----YLLGTSMARPLIAKAMVDIAKEVGADAVAHGATGKGNDQVRFELtfFAL--NPELKVVAPWREW----DIK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 176 GRAEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEylnagikivDP---------IMGVAfwKEEVEIKPEEVT 246
Cdd:PLN00200 155 GREDLIEYAKKHNIPVPVTKKSIYSRDRNLWHISYEGDILE---------DPanepkedmfMMSVS--PEAAPDQPEYIE 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 247 VRFEEGVPVALNGQRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIE 326
Cdd:PLN00200 224 IEFEKGLPVAINGKTLS-PATLLTKLNEIGGKHGIGRIDMVENRFVGMKSRGVYETPGGTILFAAHRELESLTLDRETMQ 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 327 QYRINGLRLGRLLYQGRWFDSQALMLRETAQRwVAKAITGEVTLELRRGNdYTIMNTESPNLTYEAERLTMEKGDSMFTP 406
Cdd:PLN00200 303 VKDSLALKYAELVYNGFWFDPERESMDAFMEK-ITETTTGSVRLKLYKGN-VSVAGRKSPYSLYRQDISSFEEGGGIYNQ 380
|
410
....*....|....*..
gi 487912961 407 MD-----RIGQLTMRNL 418
Cdd:PLN00200 381 ADaagfiRLYALRLRTR 397
|
|
| PRK13820 |
PRK13820 |
argininosuccinate synthase; Provisional |
20-393 |
1.82e-40 |
|
argininosuccinate synthase; Provisional
Pssm-ID: 237521 Cd Length: 394 Bit Score: 148.92 E-value: 1.82e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQKgaepYAY------TANLGQPDEDdYDAIPKKAEQYGaVKARLIDCRLQLALEGIA-A 92
Cdd:PRK13820 3 KKVVLAYSGGLDTSVCVPLLKEK----YGYdevitvTVDVGQPEEE-IKEAEEKAKKLG-DKHYTIDAKEEFAKDYIFpA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 93 IQCGAfhiSTGGVPYfnTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERF---YRyglltNPNLKIYKPWLDQN 169
Cdd:PRK13820 77 IKANA---LYEGYPL--GTALARPLIAEKIVEVAEKEGASAIAHGCTGKGNDQLRFeavFR-----ASDLEVIAPIRELN 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 170 FIdelggRAEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEylnagikivDPimgvAF--------WK---EEV 238
Cdd:PRK13820 147 LT-----REWEIEYAKEKGIPVPVGKEKPWSIDENLWSRSIEGGKLE---------DP----AFeppeeiyaWTvspEDA 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 239 EIKPEEVTVRFEEGVPVALNGQRFDnPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL---HIAYERL 315
Cdd:PRK13820 209 PDEPEIVEIEFEEGVPVAINGEKMD-GVELIRKLNEIAGKHGVGRTDMMEDRVLGLKSRENYEHPAATVLltaHKALEQL 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 316 VTgihnedTIEQYRINGL---RLGRLLYQGRWFDS--QAL--MLRETAQRwvakaITGEVTLELRRGNdYTIMNTESPNL 388
Cdd:PRK13820 288 VL------TREELKFKEIvdsKWAELAYEGLVDEPlrEDLnaFIDKTQER-----VTGTVTVKLYKGS-ARVVGRESPYA 355
|
....*
gi 487912961 389 TYEAE 393
Cdd:PRK13820 356 LYSEE 360
|
|
| PRK04527 |
PRK04527 |
argininosuccinate synthase; Provisional |
20-375 |
6.08e-24 |
|
argininosuccinate synthase; Provisional
Pssm-ID: 235305 Cd Length: 400 Bit Score: 102.99 E-value: 6.08e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLIDCRlQLALEGIAAiqcgafH 99
Cdd:PRK04527 3 KDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEERDFIEKRAAELGAASHVTVDGG-PAIWEGFVK------P 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 100 ISTGGVPYFNTTPL---GRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRyGLLTNPNLKIYKPWLD-QNFIDELg 175
Cdd:PRK04527 76 LVWAGEGYQGQYPLlvsDRYLIVDAALKRAEELGTRIIAHGCTGMGNDQVRFDL-AVKALGDYQIVAPIREiQKEHTQT- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 176 gRAEMSQFLIDNGFDYKmSKEKAYSTDSNMLGATHEAKDLEYLNAgikivdPIMGVAFWKEEVEIKPEE---VTVRFEEG 252
Cdd:PRK04527 154 -RAYEQKYLEERGFGVR-AKQKAYTINENLLGVTMSGGEIDRWEA------PGEGARGWCAPRSAWPTEaltVTIKFVEG 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 253 VPVALNGQRFDNPvELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL---HIAYERLVTgihnedTIEQYR 329
Cdd:PRK04527 226 EAVALDGKPLPGA-QILAKLNKLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLVSLltaHRALEDAVL------TKQQNR 298
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 487912961 330 IN---GLRLGRLLYQGRWFDSqalmLRETAQRWVAKA---ITGEVTLELRRG 375
Cdd:PRK04527 299 FKpdvARKWVELVYEGFYHDP----LKTDIEAFLKSSqakVNGEVTLETRGG 346
|
|
| QueC-like |
cd01995 |
7-cyano-7-deazaguanine synthase QueC and similar proteins; 7-cyano-7-deazaguanine synthase (EC ... |
20-80 |
2.32e-04 |
|
7-cyano-7-deazaguanine synthase QueC and similar proteins; 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) is also called 7-cyano-7-carbaguanine synthase, preQ(0) synthase, or queuosine biosynthesis protein QueC. It catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)), as part of the biosynthesis pathway of queuosine (Q). Q is one of the most complex modifications occurring at the wobble position of tRNAs with GUN anticodons, and is implicated in a number of biological activities, including accuracy of decoding, virulence, and cellular differentiation. This subfamily belongs to the adenine nucleotide alpha hydrolase (AANH) superfamily that also includes other N-type ATP PPases and ATP sulfurylases. It forms an alpha/beta/alpha fold which binds to the adenosine group.
Pssm-ID: 467499 [Multi-domain] Cd Length: 208 Bit Score: 42.22 E-value: 2.32e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLID 80
Cdd:cd01995 1 MKAVVLLSGGLDSTTLLYWALKEGYEVHALTFDYGQRHAKEELEAAKLIAKLLGIEHKVID 61
|
|
| COG1365 |
COG1365 |
Predicted ATPase, PP-loop superfamily [General function prediction only]; |
6-148 |
2.73e-04 |
|
Predicted ATPase, PP-loop superfamily [General function prediction only];
Pssm-ID: 440976 Cd Length: 256 Bit Score: 42.35 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487912961 6 MTDNATILQH-VPVGKKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLIDCRLQ 84
Cdd:COG1365 46 LNGPKEFLKRsKEKNPKVVVAFSGGVDSSASLIIAKWIGFDVEAVTVKSTIILPQMFKKNIKELCKKLNVKHEFIEIDLG 125
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 487912961 85 LALEGIAAiqcGAFHistggvpyfnttPLGR---AVTGTMLVTAMKED-DVNIWGD------GSTYKGNDIERF 148
Cdd:COG1365 126 EIIEDALK---GKFH------------PCGRchsLIEEAVEDYAKKNGiKIVIFGDllsvgyLSIYKKDGIVRL 184
|
|
| TilS |
COG0037 |
tRNA(Ile)-lysidine synthase TilS/MesJ [Translation, ribosomal structure and biogenesis]; tRNA ... |
19-72 |
8.66e-04 |
|
tRNA(Ile)-lysidine synthase TilS/MesJ [Translation, ribosomal structure and biogenesis]; tRNA(Ile)-lysidine synthase TilS/MesJ is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 439807 [Multi-domain] Cd Length: 235 Bit Score: 40.59 E-value: 8.66e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 487912961 19 GKKVGIAFSGGLDtSAALL-----WMKQKGAEPYAYTANLGQPDEDDYDA--IPKKAEQYG 72
Cdd:COG0037 15 GDRILVAVSGGKD-SLALLhllakLRRRLGFELVAVHVDHGLREESDEDAefVAELCEELG 74
|
|
| QueC |
COG0603 |
7-cyano-7-deazaguanine synthase (queuosine biosynthesis) [Translation, ribosomal structure and ... |
20-80 |
3.15e-03 |
|
7-cyano-7-deazaguanine synthase (queuosine biosynthesis) [Translation, ribosomal structure and biogenesis]; 7-cyano-7-deazaguanine synthase (queuosine biosynthesis) is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440368 [Multi-domain] Cd Length: 223 Bit Score: 38.99 E-value: 3.15e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 487912961 20 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLID 80
Cdd:COG0603 3 KKAVVLLSGGLDSTTCLAWALARGYEVYALSFDYGQRHRKELEAARRIAKALGVGEHKVID 63
|
|
| QueC |
pfam06508 |
Queuosine biosynthesis protein QueC; This family of proteins participate in the biosynthesis ... |
26-55 |
6.19e-03 |
|
Queuosine biosynthesis protein QueC; This family of proteins participate in the biosynthesis of 7-carboxy-7-deazaguanine. They catalyze the conversion of 7-deaza-7-carboxyguanine to preQ0.
Pssm-ID: 428982 [Multi-domain] Cd Length: 210 Bit Score: 37.98 E-value: 6.19e-03
10 20 30
....*....|....*....|....*....|
gi 487912961 26 FSGGLDTSAALLWMKQKGAEPYAYTANLGQ 55
Cdd:pfam06508 6 LSGGLDSTTCLAWAKKEGYEVYALSFDYGQ 35
|
|
| |
