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Conserved domains on  [gi|487961699|ref|WP_002035001|]
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MULTISPECIES: CxxH/CxxC protein [Bacillus]

Protein Classification

CxxH/CxxC protein( domain architecture ID 10624329)

CxxH/CxxC protein similar to Bacillus subtilis protein YyzF

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YyzF pfam14116
YyzF-like protein; The YyzF-like protein family includes the B. subtilis YyzF protein, which ...
 5-52 1.21e-17

YyzF-like protein; The YyzF-like protein family includes the B. subtilis YyzF protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.


:

Pssm-ID: 433729  Cd Length: 48  Bit Score: 68.08  E-value: 1.21e-17
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 487961699   5 CCLEHVELALDIIVDECEVAPVINNVDNSKEEKKTCEFCQNEATYVVS 52
Cdd:pfam14116  1 VCEEHLELAIDMFVDEYEQAPDIYKLEEVEKLSKTCDFCENPAVYLVV 48
 
Name Accession Description Interval E-value
YyzF pfam14116
YyzF-like protein; The YyzF-like protein family includes the B. subtilis YyzF protein, which ...
 5-52 1.21e-17

YyzF-like protein; The YyzF-like protein family includes the B. subtilis YyzF protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.


Pssm-ID: 433729  Cd Length: 48  Bit Score: 68.08  E-value: 1.21e-17
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 487961699   5 CCLEHVELALDIIVDECEVAPVINNVDNSKEEKKTCEFCQNEATYVVS 52
Cdd:pfam14116  1 VCEEHLELAIDMFVDEYEQAPDIYKLEEVEKLSKTCDFCENPAVYLVV 48
CxxH_BA5709 TIGR04129
CxxH/CxxC protein, BA_5709 family; Members of this protein family occur exclusively in the ...
 5-51 1.13e-15

CxxH/CxxC protein, BA_5709 family; Members of this protein family occur exclusively in the Firmicutes, in at least 50 different species. Members average about 55 residues in length, and four of the five invariant or nearly invariant residues occur in motifs CxxH and CxxC. The function is unknown.


Pssm-ID: 275002  Cd Length: 49  Bit Score: 63.08  E-value: 1.13e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 487961699   5 CCLEHVELALDIIVDECEVAPVINNVDNSKEEKKTCEFCQNEATYVV 51
Cdd:TIGR04129  3 CCKEHIELAIDDYVDEYETAPDLEKLEEVKKLSTTCEYCSEPAVYLV 49
 
Name Accession Description Interval E-value
YyzF pfam14116
YyzF-like protein; The YyzF-like protein family includes the B. subtilis YyzF protein, which ...
 5-52 1.21e-17

YyzF-like protein; The YyzF-like protein family includes the B. subtilis YyzF protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.


Pssm-ID: 433729  Cd Length: 48  Bit Score: 68.08  E-value: 1.21e-17
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 487961699   5 CCLEHVELALDIIVDECEVAPVINNVDNSKEEKKTCEFCQNEATYVVS 52
Cdd:pfam14116  1 VCEEHLELAIDMFVDEYEQAPDIYKLEEVEKLSKTCDFCENPAVYLVV 48
CxxH_BA5709 TIGR04129
CxxH/CxxC protein, BA_5709 family; Members of this protein family occur exclusively in the ...
 5-51 1.13e-15

CxxH/CxxC protein, BA_5709 family; Members of this protein family occur exclusively in the Firmicutes, in at least 50 different species. Members average about 55 residues in length, and four of the five invariant or nearly invariant residues occur in motifs CxxH and CxxC. The function is unknown.


Pssm-ID: 275002  Cd Length: 49  Bit Score: 63.08  E-value: 1.13e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 487961699   5 CCLEHVELALDIIVDECEVAPVINNVDNSKEEKKTCEFCQNEATYVV 51
Cdd:TIGR04129  3 CCKEHIELAIDDYVDEYETAPDLEKLEEVKKLSTTCEYCSEPAVYLV 49
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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