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Conserved domains on  [gi|488019750|ref|WP_002091149|]
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MULTISPECIES: DUF3969 family protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3969 super family cl16100
Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. ...
 9-110 2.40e-33

Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 110 amino acids in length.


The actual alignment was detected with superfamily member pfam13108:

Pssm-ID: 404088  Cd Length: 102  Bit Score: 111.77  E-value: 2.40e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488019750    9 KQPVLEKTILLFILSIVESLKLKVVSLDEAHRYIFNLEVLELLMDRNIDDQVLELIHFGMGLEDIYHVLPEELEHSIEEL 88
Cdd:pfam13108   1 NQPDLERLILIAILGLCESLKLGTVSIEEAEQYLFGPYLLERLEKLNADDQLVELIHKGTELEDVASLIPEELEKSIEEI 80

                          90       100
                  ....*....|....*....|..
gi 488019750   89 KWLCIQVLSEYSMHDDECAQLI 110
Cdd:pfam13108  81 KTKCLQVLAELPPGEMSGEKWL 102
 
Name Accession Description Interval E-value
DUF3969 pfam13108
Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. ...
 9-110 2.40e-33

Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 110 amino acids in length.


Pssm-ID: 404088  Cd Length: 102  Bit Score: 111.77  E-value: 2.40e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488019750    9 KQPVLEKTILLFILSIVESLKLKVVSLDEAHRYIFNLEVLELLMDRNIDDQVLELIHFGMGLEDIYHVLPEELEHSIEEL 88
Cdd:pfam13108   1 NQPDLERLILIAILGLCESLKLGTVSIEEAEQYLFGPYLLERLEKLNADDQLVELIHKGTELEDVASLIPEELEKSIEEI 80

                          90       100
                  ....*....|....*....|..
gi 488019750   89 KWLCIQVLSEYSMHDDECAQLI 110
Cdd:pfam13108  81 KTKCLQVLAELPPGEMSGEKWL 102
 
Name Accession Description Interval E-value
DUF3969 pfam13108
Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. ...
 9-110 2.40e-33

Protein of unknown function (DUF3969); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 110 amino acids in length.


Pssm-ID: 404088  Cd Length: 102  Bit Score: 111.77  E-value: 2.40e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488019750    9 KQPVLEKTILLFILSIVESLKLKVVSLDEAHRYIFNLEVLELLMDRNIDDQVLELIHFGMGLEDIYHVLPEELEHSIEEL 88
Cdd:pfam13108   1 NQPDLERLILIAILGLCESLKLGTVSIEEAEQYLFGPYLLERLEKLNADDQLVELIHKGTELEDVASLIPEELEKSIEEI 80

                          90       100
                  ....*....|....*....|..
gi 488019750   89 KWLCIQVLSEYSMHDDECAQLI 110
Cdd:pfam13108  81 KTKCLQVLAELPPGEMSGEKWL 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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