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Conserved domains on  [gi|488068849|ref|WP_002140246|]
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MULTISPECIES: DUF1992 domain-containing protein [Bacillus]

Protein Classification

DUF1992 domain-containing protein( domain architecture ID 10558648)

DUF1992 domain-containing protein similar to Bacillus subtilis YflB

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DJC28_CD pfam09350
DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that ...
 7-74 2.94e-26

DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that may have a role in protein folding or as a chaperone, including DnaJ homolog subfamily C member 28. DnaJ is a member of the J-protein family (also known as HSP40), which are defined by the presence of a J domain that regulate the activity of 70kDa heat-shock proteins. The function of this domain is not yet known.


:

Pssm-ID: 462766  Cd Length: 72  Bit Score: 93.00  E-value: 2.94e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488068849    7 IAEEKIRQAIRNGDLDHIPGKGKPLQLEDLS----MVPPELRMSYKILKNAGMIPPEMELQKDILKIEDLIA 74
Cdd:pfam09350   1 LAERRIREAIERGEFDNLPGRGKPLPLDDDSehnpFVPEELRMANRILKNAGVLPPWIELRKEIERLIELLR 72
 
Name Accession Description Interval E-value
DJC28_CD pfam09350
DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that ...
 7-74 2.94e-26

DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that may have a role in protein folding or as a chaperone, including DnaJ homolog subfamily C member 28. DnaJ is a member of the J-protein family (also known as HSP40), which are defined by the presence of a J domain that regulate the activity of 70kDa heat-shock proteins. The function of this domain is not yet known.


Pssm-ID: 462766  Cd Length: 72  Bit Score: 93.00  E-value: 2.94e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488068849    7 IAEEKIRQAIRNGDLDHIPGKGKPLQLEDLS----MVPPELRMSYKILKNAGMIPPEMELQKDILKIEDLIA 74
Cdd:pfam09350   1 LAERRIREAIERGEFDNLPGRGKPLPLDDDSehnpFVPEELRMANRILKNAGVLPPWIELRKEIERLIELLR 72
PRK10203 PRK10203
hypothetical protein; Provisional
 8-98 3.23e-26

hypothetical protein; Provisional


Pssm-ID: 182303  Cd Length: 122  Bit Score: 94.72  E-value: 3.23e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488068849   8 AEEKIRQAIRNGDLDHIPGKGKPLQLEDLSMVPPELRMSYKILKNAGMIPPEMELQKDILKIEDLIACC-YDEVERKELQ 86
Cdd:PRK10203   8 AERHILEAQRKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDLLKGIrEDDPQYQEVS 87

                         90
                 ....*....|..
gi 488068849  87 EELTAKTLRFQQ 98
Cdd:PRK10203  88 RRLSLLELKLRQ 99
 
Name Accession Description Interval E-value
DJC28_CD pfam09350
DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that ...
 7-74 2.94e-26

DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that may have a role in protein folding or as a chaperone, including DnaJ homolog subfamily C member 28. DnaJ is a member of the J-protein family (also known as HSP40), which are defined by the presence of a J domain that regulate the activity of 70kDa heat-shock proteins. The function of this domain is not yet known.


Pssm-ID: 462766  Cd Length: 72  Bit Score: 93.00  E-value: 2.94e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488068849    7 IAEEKIRQAIRNGDLDHIPGKGKPLQLEDLS----MVPPELRMSYKILKNAGMIPPEMELQKDILKIEDLIA 74
Cdd:pfam09350   1 LAERRIREAIERGEFDNLPGRGKPLPLDDDSehnpFVPEELRMANRILKNAGVLPPWIELRKEIERLIELLR 72
PRK10203 PRK10203
hypothetical protein; Provisional
 8-98 3.23e-26

hypothetical protein; Provisional


Pssm-ID: 182303  Cd Length: 122  Bit Score: 94.72  E-value: 3.23e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488068849   8 AEEKIRQAIRNGDLDHIPGKGKPLQLEDLSMVPPELRMSYKILKNAGMIPPEMELQKDILKIEDLIACC-YDEVERKELQ 86
Cdd:PRK10203   8 AERHILEAQRKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDLLKGIrEDDPQYQEVS 87

                         90
                 ....*....|..
gi 488068849  87 EELTAKTLRFQQ 98
Cdd:PRK10203  88 RRLSLLELKLRQ 99
PLN03085 PLN03085
nucleobase:cation symporter-1; Provisional
 5-66 5.97e-09

nucleobase:cation symporter-1; Provisional


Pssm-ID: 215566  Cd Length: 221  Bit Score: 51.91  E-value: 5.97e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488068849   5 LNIAEEKIRQAIRNGDLDHIPGKGKPLQLEDLSMVPPELRMSYKILKNAGMIPPEMELQKDI 66
Cdd:PLN03085  90 INVVEQRIWHSMEEGHFENLPGKGKPLNLSTNPHADPAEDTLYRILSKNGCAPEWVELNKEI 151
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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