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Conserved domains on  [gi|488091298|ref|WP_002162695|]
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MULTISPECIES: IS3 family transposase, partial [Bacillus cereus group]

Protein Classification

transposase( domain architecture ID 706434)

transposase binds to the end of a transposon and catalyzes the movement of the transposon to another part of the genome by a cut and paste mechanism or a replicative transposition mechanism; similar to Escherichia coli IS150 protein InsAB

Gene Ontology:  GO:0006313|GO:0003677|GO:0004803
PubMed:  20885819

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
InsE super family cl26146
Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons];
3-33 3.91e-04

Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons];


The actual alignment was detected with superfamily member COG2963:

Pssm-ID: 442203 [Multi-domain]  Cd Length: 93  Bit Score: 33.36  E-value: 3.91e-04
                        10        20        30
                ....*....|....*....|....*....|.
gi 488091298  3 KFTADEKIQIVLRYLNGNESYREMGRSLGIS 33
Cdd:COG2963   7 RYSPEFKAEAVRLVLEGGASVAEVARELGIS 37
 
Name Accession Description Interval E-value
InsE COG2963
Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons];
3-33 3.91e-04

Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons];


Pssm-ID: 442203 [Multi-domain]  Cd Length: 93  Bit Score: 33.36  E-value: 3.91e-04
                        10        20        30
                ....*....|....*....|....*....|.
gi 488091298  3 KFTADEKIQIVLRYLNGNESYREMGRSLGIS 33
Cdd:COG2963   7 RYSPEFKAEAVRLVLEGGASVAEVARELGIS 37
 
Name Accession Description Interval E-value
InsE COG2963
Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons];
3-33 3.91e-04

Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons];


Pssm-ID: 442203 [Multi-domain]  Cd Length: 93  Bit Score: 33.36  E-value: 3.91e-04
                        10        20        30
                ....*....|....*....|....*....|.
gi 488091298  3 KFTADEKIQIVLRYLNGNESYREMGRSLGIS 33
Cdd:COG2963   7 RYSPEFKAEAVRLVLEGGASVAEVARELGIS 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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