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Conserved domains on  [gi|488146644|ref|WP_002217852|]
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MULTISPECIES: DNA-mimic protein DMP19 [Neisseria]

Protein Classification

DMP19 family protein( domain architecture ID 10626476)

DMP19 family protein is a DUF4375 domain-containing protein, similar to Neisseria conserved protein DMP19, which may act as a DNA mimic protein that prevents DNA binding to a nitrogen-response transcription factor

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4375 pfam14300
Domain of unknown function (DUF4375); This family of proteins is found in bacteria. Proteins ...
 38-155 1.13e-30

Domain of unknown function (DUF4375); This family of proteins is found in bacteria. Proteins in this family are typically between 156 and 204 amino acids in length. There is a single completely conserved residue G that may be functionally important.


:

Pssm-ID: 433851  Cd Length: 116  Bit Score: 107.28  E-value: 1.13e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488146644   38 LSCLSDDQHTLTAFCYLDSQVEEGGFVQLIASGYGEYIfrNPLADSLRRWKIKAVPKVLDKAKALYEQHGKTIETLADgG 117
Cdd:pfam14300   1 MAKLSEEQRTLLAYWILESEVMNGGFVQLFHNGYGDFI--NPALKALRLIGAKELAKLLQKAIKLFGKGGPPLDREER-D 77

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 488146644  118 ADIESLRKQ-FPDFEEWDGAYYEAAEQDLPLLAEHIQSN 155
Cdd:pfam14300  78 EEFMALYEEeYPEFDDLDDRFYEYEEELTALLAEYVDEH 116
 
Name Accession Description Interval E-value
DUF4375 pfam14300
Domain of unknown function (DUF4375); This family of proteins is found in bacteria. Proteins ...
 38-155 1.13e-30

Domain of unknown function (DUF4375); This family of proteins is found in bacteria. Proteins in this family are typically between 156 and 204 amino acids in length. There is a single completely conserved residue G that may be functionally important.


Pssm-ID: 433851  Cd Length: 116  Bit Score: 107.28  E-value: 1.13e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488146644   38 LSCLSDDQHTLTAFCYLDSQVEEGGFVQLIASGYGEYIfrNPLADSLRRWKIKAVPKVLDKAKALYEQHGKTIETLADgG 117
Cdd:pfam14300   1 MAKLSEEQRTLLAYWILESEVMNGGFVQLFHNGYGDFI--NPALKALRLIGAKELAKLLQKAIKLFGKGGPPLDREER-D 77

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 488146644  118 ADIESLRKQ-FPDFEEWDGAYYEAAEQDLPLLAEHIQSN 155
Cdd:pfam14300  78 EEFMALYEEeYPEFDDLDDRFYEYEEELTALLAEYVDEH 116
 
Name Accession Description Interval E-value
DUF4375 pfam14300
Domain of unknown function (DUF4375); This family of proteins is found in bacteria. Proteins ...
 38-155 1.13e-30

Domain of unknown function (DUF4375); This family of proteins is found in bacteria. Proteins in this family are typically between 156 and 204 amino acids in length. There is a single completely conserved residue G that may be functionally important.


Pssm-ID: 433851  Cd Length: 116  Bit Score: 107.28  E-value: 1.13e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488146644   38 LSCLSDDQHTLTAFCYLDSQVEEGGFVQLIASGYGEYIfrNPLADSLRRWKIKAVPKVLDKAKALYEQHGKTIETLADgG 117
Cdd:pfam14300   1 MAKLSEEQRTLLAYWILESEVMNGGFVQLFHNGYGDFI--NPALKALRLIGAKELAKLLQKAIKLFGKGGPPLDREER-D 77

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 488146644  118 ADIESLRKQ-FPDFEEWDGAYYEAAEQDLPLLAEHIQSN 155
Cdd:pfam14300  78 EEFMALYEEeYPEFDDLDDRFYEYEEELTALLAEYVDEH 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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