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Conserved domains on  [gi|488194366|ref|WP_002265574|]
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nuclear transport factor 2 family protein [Streptococcus mutans]

Protein Classification

nuclear transport factor 2 family protein( domain architecture ID 10577308)

nuclear transport factor 2 (NTF2) family protein with a SnoaL-like polyketide cyclase domain

CATH:  3.10.450.50
PubMed:  11129791|11529502|24246060
SCOP:  3000472

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SnoaL_2 pfam12680
SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.
 27-107 5.44e-05

SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.


:

Pssm-ID: 432716 [Multi-domain]  Cd Length: 100  Bit Score: 39.19  E-value: 5.44e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488194366   27 LFKDDAIIEaNDGHRYSGRREIDSFFTEFFSRNAETRHlydirELSDTVQQANWGVV------CRRKNGAYIALTGTDIA 100
Cdd:pfam12680  19 LFAPDAVFH-DPGGPLRGRDAIRAFFAALFAAFPDLRF-----EIHDVIADGDRVAVrwtvtgTIPPTGRGVRVRGVDVF 92


                  ....*..
gi 488194366  101 EVEEGKI 107
Cdd:pfam12680  93 RFRDGKI 99
 
Name Accession Description Interval E-value
SnoaL_2 pfam12680
SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.
 27-107 5.44e-05

SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.


Pssm-ID: 432716 [Multi-domain]  Cd Length: 100  Bit Score: 39.19  E-value: 5.44e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488194366   27 LFKDDAIIEaNDGHRYSGRREIDSFFTEFFSRNAETRHlydirELSDTVQQANWGVV------CRRKNGAYIALTGTDIA 100
Cdd:pfam12680  19 LFAPDAVFH-DPGGPLRGRDAIRAFFAALFAAFPDLRF-----EIHDVIADGDRVAVrwtvtgTIPPTGRGVRVRGVDVF 92


                  ....*..
gi 488194366  101 EVEEGKI 107
Cdd:pfam12680  93 RFRDGKI 99
YesE COG3631
Ketosteroid isomerase-related protein [General function prediction only];
27-112 5.50e-05

Ketosteroid isomerase-related protein [General function prediction only];


Pssm-ID: 442849  Cd Length: 126  Bit Score: 39.52  E-value: 5.50e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488194366  27 LFKDDAIIE---ANDGHRYSGRREIDSFFTEFFSRNAETRHlydirELSDTVQQANWGVVC------RRKNGAYIALTGT 97
Cdd:COG3631   24 LLAEDVVWEdpgGPGAGTYRGKEAVRAFFARLAAAFEDLRF-----EVRRVVADGDRVVVEgtvrgtVLATGKPYENRYA 98

                         90
                 ....*....|....*
gi 488194366  98 DIAEVEEGKISHLTI 112
Cdd:COG3631   99 DVFTVRDGKIVRVRE 113
 
Name Accession Description Interval E-value
SnoaL_2 pfam12680
SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.
 27-107 5.44e-05

SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.


Pssm-ID: 432716 [Multi-domain]  Cd Length: 100  Bit Score: 39.19  E-value: 5.44e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488194366   27 LFKDDAIIEaNDGHRYSGRREIDSFFTEFFSRNAETRHlydirELSDTVQQANWGVV------CRRKNGAYIALTGTDIA 100
Cdd:pfam12680  19 LFAPDAVFH-DPGGPLRGRDAIRAFFAALFAAFPDLRF-----EIHDVIADGDRVAVrwtvtgTIPPTGRGVRVRGVDVF 92


                  ....*..
gi 488194366  101 EVEEGKI 107
Cdd:pfam12680  93 RFRDGKI 99
YesE COG3631
Ketosteroid isomerase-related protein [General function prediction only];
27-112 5.50e-05

Ketosteroid isomerase-related protein [General function prediction only];


Pssm-ID: 442849  Cd Length: 126  Bit Score: 39.52  E-value: 5.50e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488194366  27 LFKDDAIIE---ANDGHRYSGRREIDSFFTEFFSRNAETRHlydirELSDTVQQANWGVVC------RRKNGAYIALTGT 97
Cdd:COG3631   24 LLAEDVVWEdpgGPGAGTYRGKEAVRAFFARLAAAFEDLRF-----EVRRVVADGDRVVVEgtvrgtVLATGKPYENRYA 98

                         90
                 ....*....|....*
gi 488194366  98 DIAEVEEGKISHLTI 112
Cdd:COG3631   99 DVFTVRDGKIVRVRE 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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