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Conserved domains on  [gi|488225791|ref|WP_002296999|]
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MULTISPECIES: GNAT family protein [Enterococcus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RimL super family cl34333
Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, ...
6-38 9.13e-05

Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG1670:

Pssm-ID: 441276 [Multi-domain]  Cd Length: 173  Bit Score: 36.52  E-value: 9.13e-05
                         10        20        30
                 ....*....|....*....|....*....|...
gi 488225791   6 EKCGMTKEVVIRKVRFLNNQYYDSVKYGILWEE 38
Cdd:COG1670  141 EKLGFRLEGTLRDALVIDGRYRDHVLYSLLREE 173
 
Name Accession Description Interval E-value
RimL COG1670
Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, ...
6-38 9.13e-05

Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441276 [Multi-domain]  Cd Length: 173  Bit Score: 36.52  E-value: 9.13e-05
                         10        20        30
                 ....*....|....*....|....*....|...
gi 488225791   6 EKCGMTKEVVIRKVRFLNNQYYDSVKYGILWEE 38
Cdd:COG1670  141 EKLGFRLEGTLRDALVIDGRYRDHVLYSLLREE 173
 
Name Accession Description Interval E-value
RimL COG1670
Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, ...
6-38 9.13e-05

Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441276 [Multi-domain]  Cd Length: 173  Bit Score: 36.52  E-value: 9.13e-05
                         10        20        30
                 ....*....|....*....|....*....|...
gi 488225791   6 EKCGMTKEVVIRKVRFLNNQYYDSVKYGILWEE 38
Cdd:COG1670  141 EKLGFRLEGTLRDALVIDGRYRDHVLYSLLREE 173
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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