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Concise Results
Standard Results
Full Results
amino acid permease [Enterococcus faecium]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
2A0307_GadC super family
cl30095 glutamate:gamma-aminobutyrate antiporter; Lowered cutoffs from 1000/500 to 800/300, promoted ...
10-473
1.30e-180
glutamate:gamma-aminobutyrate antiporter; Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009 [Transport and binding proteins, Amino acids, peptides and amines]
TIGR00910 :Pssm-ID: 129988
Cd Length: 507
Bit Score: 515.22
E-value: 1.30e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 10 AKKL TF FGF L A M T I SMV VSL YEYPTFATSGF S LVFFLLLGG L LWFIPVALCAAEMATV K GWE K GG VYT WVS R TLG K RFGF 89
Cdd:TIGR00910 3 AKKL SL FGF F A I T A SMV LAV YEYPTFATSGF H LVFFLLLGG I LWFIPVALCAAEMATV D GWE E GG IFA WVS N TLG E RFGF 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 90 AAIFF Q WF E I TV G YLT M L YF LT GALSY ATGIG A IQNNKYL K LAIL LIIFWA ILL SQ LK GTK Y T SL IA RI GF V AGIL L PA L 169
Cdd:TIGR00910 83 AAIFF G WF Q I AI G FIP M I YF IL GALSY ILKFP A LNEDPII K FIAA LIIFWA LAF SQ FG GTK R T AK IA KA GF F AGIL I PA F 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 170 V LF G L GIH Y VAS GAP LQTTLSMKTLI PDFSK LP TLVVFV S FI L AYMGVE T SASH A NE M ENP KK DYPLAM FV L V I L AI I LD 249
Cdd:TIGR00910 163 I LF A L AAA Y FHG GAP IAIEIDSHAFF PDFSK VG TLVVFV A FI G AYMGVE A SASH I NE L ENP GR DYPLAM IL L M I A AI C LD 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 250 TF GG LT IA TTV P QHGLS L NT GVIQ SLEF L LR H IDPNLA W IA K IL A I L VCL GV IG EIASW VTS PS KALHV AA EE GLLP EY F 329
Cdd:TIGR00910 243 AI GG FS IA AVI P GKEIN L SA GVIQ TFQT L IL H FAHEIE W LV K VI A A L IAF GV LA EIASW IVG PS RGMFA AA QK GLLP AA F 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 330 AK E N T H G VP AH L MVAN GI VAT I WA A VF T LS GGGNNLSFL A A MS LTVVIYL ML YF M FF A GY LK L VF K DDS L E R AYQV PGG K 409
Cdd:TIGR00910 323 AK M N K H E VP VP L VIIQ GI ITS I AG A IL T FG GGGNNLSFL I A IA LTVVIYL CA YF L FF I GY FV L IL K HPD L K R TFNI PGG I 402
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488252845 410 VV K V I V A CL G L L T S L FAF C ISF V PPA S IA AGQHGI Y ET IL IV S Y L IVLVI PF T IYA CRH K FQ HA 473
Cdd:TIGR00910 403 GG K L I I A GI G F L L S I FAF F ISF L PPA N IA GDETDM Y QE IL LI S F L VTAAL PF I IYA LHD K KG HA 466
Name
Accession
Description
Interval
E-value
2A0307_GadC
TIGR00910 glutamate:gamma-aminobutyrate antiporter; Lowered cutoffs from 1000/500 to 800/300, promoted ...
10-473
1.30e-180
glutamate:gamma-aminobutyrate antiporter; Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009 [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 129988
Cd Length: 507
Bit Score: 515.22
E-value: 1.30e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 10 AKKL TF FGF L A M T I SMV VSL YEYPTFATSGF S LVFFLLLGG L LWFIPVALCAAEMATV K GWE K GG VYT WVS R TLG K RFGF 89
Cdd:TIGR00910 3 AKKL SL FGF F A I T A SMV LAV YEYPTFATSGF H LVFFLLLGG I LWFIPVALCAAEMATV D GWE E GG IFA WVS N TLG E RFGF 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 90 AAIFF Q WF E I TV G YLT M L YF LT GALSY ATGIG A IQNNKYL K LAIL LIIFWA ILL SQ LK GTK Y T SL IA RI GF V AGIL L PA L 169
Cdd:TIGR00910 83 AAIFF G WF Q I AI G FIP M I YF IL GALSY ILKFP A LNEDPII K FIAA LIIFWA LAF SQ FG GTK R T AK IA KA GF F AGIL I PA F 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 170 V LF G L GIH Y VAS GAP LQTTLSMKTLI PDFSK LP TLVVFV S FI L AYMGVE T SASH A NE M ENP KK DYPLAM FV L V I L AI I LD 249
Cdd:TIGR00910 163 I LF A L AAA Y FHG GAP IAIEIDSHAFF PDFSK VG TLVVFV A FI G AYMGVE A SASH I NE L ENP GR DYPLAM IL L M I A AI C LD 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 250 TF GG LT IA TTV P QHGLS L NT GVIQ SLEF L LR H IDPNLA W IA K IL A I L VCL GV IG EIASW VTS PS KALHV AA EE GLLP EY F 329
Cdd:TIGR00910 243 AI GG FS IA AVI P GKEIN L SA GVIQ TFQT L IL H FAHEIE W LV K VI A A L IAF GV LA EIASW IVG PS RGMFA AA QK GLLP AA F 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 330 AK E N T H G VP AH L MVAN GI VAT I WA A VF T LS GGGNNLSFL A A MS LTVVIYL ML YF M FF A GY LK L VF K DDS L E R AYQV PGG K 409
Cdd:TIGR00910 323 AK M N K H E VP VP L VIIQ GI ITS I AG A IL T FG GGGNNLSFL I A IA LTVVIYL CA YF L FF I GY FV L IL K HPD L K R TFNI PGG I 402
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488252845 410 VV K V I V A CL G L L T S L FAF C ISF V PPA S IA AGQHGI Y ET IL IV S Y L IVLVI PF T IYA CRH K FQ HA 473
Cdd:TIGR00910 403 GG K L I I A GI G F L L S I FAF F ISF L PPA N IA GDETDM Y QE IL LI S F L VTAAL PF I IYA LHD K KG HA 466
AA_permease_2
pfam13520 Amino acid permease;
13-453
5.87e-38
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 143.60
E-value: 5.87e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 13 L TFFGFL A MT I SM V VSLYEYPT -- F A TS G FS L VFFLLLGGLLWFIP V A L CA AE MATVK g WEK GG V Y TWVSRTL GK RFG F A 90
Cdd:pfam13520 1 L GLLSAF A LV I GS V IGSGIFVA pl V A SG G PA L IVWGWIAAIIFSLA V G L VY AE LSSAL - PRS GG I Y VYLENAF GK FVA F L 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 91 A IFFQ WF EITV G YLTMLYFLTGA L SY A T G i GAIQNNKY L KLA I LLI I FWAILLSQLK G TKYTSL I AR I GFVAGI LLP ALV 170
Cdd:pfam13520 80 A GWSN WF AYVL G LASSASVAASY L LS A L G - PDLVPTTW L TYG I AIA I LIIFAIINIR G VRESAK I QN I LGILKL LLP LIL 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 171 LFG LG IHYVAS G APLQTTLSMK T LI PD FSKL p TLVV F VSFILAYM G V E TS A SHAN E M en P K KDY P L A M F VL VI LAII L DT 250
Cdd:pfam13520 159 III LG LVTADG G GFNLLSGEWH T FF PD GWPG - VFAG F LGVLWSFT G F E SA A NVSE E V -- K K RNV P K A I F IG VI IVGV L YI 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 251 FGGLTIATT VP QHGLS L NT G VI Q SLEF L LRHI dp NLA W I A K I LA IL VC L GVI G EIASWVTSP S KA L HVA A EE G L LP E -- Y 328
Cdd:pfam13520 236 LVNIAFFGV VP DDEIA L SS G LG Q VAAL L FQAV -- GGK W G A I I VV IL LA L SLL G AVNTAIVGA S RL L YAL A RD G V LP F sr F 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 329 FAK E N TH G V P AHLMVANG I VAT I WAAV F T LS GG gnnl SFL A AM SL TVVI YL ML Y FMFFA G Y L K L VF K DDS L E R AYQ vpgg 408
Cdd:pfam13520 314 FAK V N KF G S P IRAIILTA I LSL I LLLL F L LS PA ---- AYN A LL SL SAYG YL LS Y LLPII G L L I L RK K RPD L G R IPG ---- 385
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 488252845 409 kvv KVI VA CL G L L T SLF AFCIS F V PP ASI A A G QHGI Y ET ILIV SY 453
Cdd:pfam13520 386 --- RWP VA IF G I L F SLF LIVAL F F PP VGP A T G SSLN Y AI ILIV AF 427
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-440
1.60e-36
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 139.65
E-value: 1.60e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 1 M QQSKTKIPAK KL TF F GFL A MTISMVVSLY eyp T F ATS G FSLVFFLLLGG L L W F I ------ P VAL CA AE M A TVKG w EK GG 74
Cdd:COG0531 1 M SRGESSELKR KL GL F DLV A LGVGAIIGAG --- I F VLP G LAAGLAGPAAI L A W L I agllal L VAL SY AE L A SAFP - RA GG 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 75 V YT WVS R T LG KRF GF A A IFFQWFEITVGYLTMLYFLT G A LS YATGI G A iqnnkyl KLA I L L IIFWAIL L SQ L K G T K YTSL 154
Cdd:COG0531 77 A YT YAR R A LG PLL GF L A GWALLLSYVLAVAAVAVAFG G Y LS SLFPA G G ------- SVL I A L VLILLLT L LN L R G V K ESAK 149
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 155 IAR I GF V AGI L LPA L VLFGLGIHYVAS gaplqttl SMKTLI P DFSK L PTLVVFVSFIL - A YM G V E TS A SH A N E ME NPK KD 233
Cdd:COG0531 150 VNN I LT V LKL L VLL L FIVVGLFAFDPA -------- NFTPFL P AGGG L SGVLAALALAF f A FT G F E AI A NL A E E AK NPK RN 221
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 234 Y P L A MFVLVILAII L DTFGG L TIATT VP QHG L SLNTGVIQ sle FLLRHIDPN la W I A KIL A ILVC L GVI G EIASWVTSP S 313
Cdd:COG0531 222 I P R A IILSLLIVGV L YILVS L ALTGV VP YDE L AASGAPLA --- DAAEAVFGP -- W G A ILI A LGAL L SLL G ALNASILGA S 296
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 314 KA L HVA A EE GLLP EY FAK EN - TH G V P AHLMVAN G IV A TIWAAVF tlsgggn NL SF L A AM SL TV V IY L ML Y FMFFAGYLK L 392
Cdd:COG0531 297 RL L YAM A RD GLLP KV FAK VH p RF G T P VNAILLT G VI A LLLLLLG ------- AA SF T A LA SL AS V GV L LA Y LLVALAVIV L 369
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 488252845 393 VFKDDS L E R AYQ VP G gkvvk VIVAC LG L L TS LF AFCISFVPPAS I AAG 440
Cdd:COG0531 370 RRRRPD L P R PFR VP L ----- PLIPI LG I L LC LF LLYLLGPGALL I GLV 412
PRK15238
PRK15238 inner membrane transporter YjeM; Provisional
11-469
7.41e-17
inner membrane transporter YjeM; Provisional
Pssm-ID: 237929 [Multi-domain]
Cd Length: 496
Bit Score: 82.68
E-value: 7.41e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 11 KKL TFF G FLA M TISM V VSLYEY P T - F ATS G F S LVFFLL L GGL L W FIP V AL CA AE MATVKGW EKGG V Y T W VSRTL G KR F G F 89
Cdd:PRK15238 7 KKL SLI G LIL M IFTS V FGFANS P R a F YLM G Y S AIPWYI L SAI L F FIP F AL MM AE YGSAFKD EKGG I Y S W MNKSV G PK F A F 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 90 AAI F F q WF EITVGYL ----- TMLYFLTGAL -- SYA T GIGAIQNNKYLKLAIL L IIF W A IL LSQL -- KG TKYTSLIAR IG F 160
Cdd:PRK15238 87 IGT F M - WF ASYIIWM vstas KIWIPFSTFI fg KDT T QTWHFLGLNSTQVVGI L AVI W M IL VTFV as KG INKIAKVTS IG G 165
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 161 V A GI LL PALV L FGLG I HYVAS G APLQTTLSMKTLI ---- P DFSKLPTLVV FV S F - I L AY M G V E TSASHANEM ENP K K DY P 235
Cdd:PRK15238 166 I A VM LL NIVL L LVSI I ILILN G GHFAQPIGVSSFV tspn P AYQSPIAVLS FV V F a I F AY G G I E AVGGLVDKT ENP E K NF P 245
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 236 LAMFVLV I LAI I LDTFGGLTIATTVPQH ---- GL S L N T G ----- VIQS L EFL L R H --- ID P NLA ----- W I A K I LAILVC 298
Cdd:PRK15238 246 KGIIIAA I VIS I GYSLAIFLWGVSTNWQ qvls NK S V N L G nityv LMNN L GYT L G H alg LS P AAS ltlgv W F A R I TGLSMF 325
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 299 L GVI G EIASWVT SP S K A L HVAAEEG L L P EYFA K E N TH G V PA HL M VANG I VATIW aa VFTL S G GG NNL S - F LAAMS L TVVI 377
Cdd:PRK15238 326 L AYT G AFFTLSY SP L K Q L IEGTPKA L W P KKMT K L N KN G M PA NA M WLQC I IVSVF -- ILLV S F GG DAA S a F FNILT L MANV 403
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 378 YLM L YFM F F AG YLKLVF K DDSLE R AYQ V PGG K VVKV I VACLGL L TSL FA FCISFVP P ASIAAG Q HGIYETILI V SYL I VL 457
Cdd:PRK15238 404 SMT L PYL F L AG AFPFFK K KKDID R PFV V FKT K KSTL I ATIVVV L VVG FA NVFTIIQ P VIEGDY Q STFWMIGGP V FFS I LA 483
490
....*....|..
gi 488252845 458 V I PFTI Y ACRHK 469
Cdd:PRK15238 484 W I IYQN Y EKKMA 495
Name
Accession
Description
Interval
E-value
2A0307_GadC
TIGR00910 glutamate:gamma-aminobutyrate antiporter; Lowered cutoffs from 1000/500 to 800/300, promoted ...
10-473
1.30e-180
glutamate:gamma-aminobutyrate antiporter; Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009 [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 129988
Cd Length: 507
Bit Score: 515.22
E-value: 1.30e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 10 AKKL TF FGF L A M T I SMV VSL YEYPTFATSGF S LVFFLLLGG L LWFIPVALCAAEMATV K GWE K GG VYT WVS R TLG K RFGF 89
Cdd:TIGR00910 3 AKKL SL FGF F A I T A SMV LAV YEYPTFATSGF H LVFFLLLGG I LWFIPVALCAAEMATV D GWE E GG IFA WVS N TLG E RFGF 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 90 AAIFF Q WF E I TV G YLT M L YF LT GALSY ATGIG A IQNNKYL K LAIL LIIFWA ILL SQ LK GTK Y T SL IA RI GF V AGIL L PA L 169
Cdd:TIGR00910 83 AAIFF G WF Q I AI G FIP M I YF IL GALSY ILKFP A LNEDPII K FIAA LIIFWA LAF SQ FG GTK R T AK IA KA GF F AGIL I PA F 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 170 V LF G L GIH Y VAS GAP LQTTLSMKTLI PDFSK LP TLVVFV S FI L AYMGVE T SASH A NE M ENP KK DYPLAM FV L V I L AI I LD 249
Cdd:TIGR00910 163 I LF A L AAA Y FHG GAP IAIEIDSHAFF PDFSK VG TLVVFV A FI G AYMGVE A SASH I NE L ENP GR DYPLAM IL L M I A AI C LD 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 250 TF GG LT IA TTV P QHGLS L NT GVIQ SLEF L LR H IDPNLA W IA K IL A I L VCL GV IG EIASW VTS PS KALHV AA EE GLLP EY F 329
Cdd:TIGR00910 243 AI GG FS IA AVI P GKEIN L SA GVIQ TFQT L IL H FAHEIE W LV K VI A A L IAF GV LA EIASW IVG PS RGMFA AA QK GLLP AA F 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 330 AK E N T H G VP AH L MVAN GI VAT I WA A VF T LS GGGNNLSFL A A MS LTVVIYL ML YF M FF A GY LK L VF K DDS L E R AYQV PGG K 409
Cdd:TIGR00910 323 AK M N K H E VP VP L VIIQ GI ITS I AG A IL T FG GGGNNLSFL I A IA LTVVIYL CA YF L FF I GY FV L IL K HPD L K R TFNI PGG I 402
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488252845 410 VV K V I V A CL G L L T S L FAF C ISF V PPA S IA AGQHGI Y ET IL IV S Y L IVLVI PF T IYA CRH K FQ HA 473
Cdd:TIGR00910 403 GG K L I I A GI G F L L S I FAF F ISF L PPA N IA GDETDM Y QE IL LI S F L VTAAL PF I IYA LHD K KG HA 466
AA_permease_2
pfam13520 Amino acid permease;
13-453
5.87e-38
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 143.60
E-value: 5.87e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 13 L TFFGFL A MT I SM V VSLYEYPT -- F A TS G FS L VFFLLLGGLLWFIP V A L CA AE MATVK g WEK GG V Y TWVSRTL GK RFG F A 90
Cdd:pfam13520 1 L GLLSAF A LV I GS V IGSGIFVA pl V A SG G PA L IVWGWIAAIIFSLA V G L VY AE LSSAL - PRS GG I Y VYLENAF GK FVA F L 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 91 A IFFQ WF EITV G YLTMLYFLTGA L SY A T G i GAIQNNKY L KLA I LLI I FWAILLSQLK G TKYTSL I AR I GFVAGI LLP ALV 170
Cdd:pfam13520 80 A GWSN WF AYVL G LASSASVAASY L LS A L G - PDLVPTTW L TYG I AIA I LIIFAIINIR G VRESAK I QN I LGILKL LLP LIL 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 171 LFG LG IHYVAS G APLQTTLSMK T LI PD FSKL p TLVV F VSFILAYM G V E TS A SHAN E M en P K KDY P L A M F VL VI LAII L DT 250
Cdd:pfam13520 159 III LG LVTADG G GFNLLSGEWH T FF PD GWPG - VFAG F LGVLWSFT G F E SA A NVSE E V -- K K RNV P K A I F IG VI IVGV L YI 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 251 FGGLTIATT VP QHGLS L NT G VI Q SLEF L LRHI dp NLA W I A K I LA IL VC L GVI G EIASWVTSP S KA L HVA A EE G L LP E -- Y 328
Cdd:pfam13520 236 LVNIAFFGV VP DDEIA L SS G LG Q VAAL L FQAV -- GGK W G A I I VV IL LA L SLL G AVNTAIVGA S RL L YAL A RD G V LP F sr F 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 329 FAK E N TH G V P AHLMVANG I VAT I WAAV F T LS GG gnnl SFL A AM SL TVVI YL ML Y FMFFA G Y L K L VF K DDS L E R AYQ vpgg 408
Cdd:pfam13520 314 FAK V N KF G S P IRAIILTA I LSL I LLLL F L LS PA ---- AYN A LL SL SAYG YL LS Y LLPII G L L I L RK K RPD L G R IPG ---- 385
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 488252845 409 kvv KVI VA CL G L L T SLF AFCIS F V PP ASI A A G QHGI Y ET ILIV SY 453
Cdd:pfam13520 386 --- RWP VA IF G I L F SLF LIVAL F F PP VGP A T G SSLN Y AI ILIV AF 427
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-440
1.60e-36
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 139.65
E-value: 1.60e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 1 M QQSKTKIPAK KL TF F GFL A MTISMVVSLY eyp T F ATS G FSLVFFLLLGG L L W F I ------ P VAL CA AE M A TVKG w EK GG 74
Cdd:COG0531 1 M SRGESSELKR KL GL F DLV A LGVGAIIGAG --- I F VLP G LAAGLAGPAAI L A W L I agllal L VAL SY AE L A SAFP - RA GG 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 75 V YT WVS R T LG KRF GF A A IFFQWFEITVGYLTMLYFLT G A LS YATGI G A iqnnkyl KLA I L L IIFWAIL L SQ L K G T K YTSL 154
Cdd:COG0531 77 A YT YAR R A LG PLL GF L A GWALLLSYVLAVAAVAVAFG G Y LS SLFPA G G ------- SVL I A L VLILLLT L LN L R G V K ESAK 149
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 155 IAR I GF V AGI L LPA L VLFGLGIHYVAS gaplqttl SMKTLI P DFSK L PTLVVFVSFIL - A YM G V E TS A SH A N E ME NPK KD 233
Cdd:COG0531 150 VNN I LT V LKL L VLL L FIVVGLFAFDPA -------- NFTPFL P AGGG L SGVLAALALAF f A FT G F E AI A NL A E E AK NPK RN 221
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 234 Y P L A MFVLVILAII L DTFGG L TIATT VP QHG L SLNTGVIQ sle FLLRHIDPN la W I A KIL A ILVC L GVI G EIASWVTSP S 313
Cdd:COG0531 222 I P R A IILSLLIVGV L YILVS L ALTGV VP YDE L AASGAPLA --- DAAEAVFGP -- W G A ILI A LGAL L SLL G ALNASILGA S 296
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 314 KA L HVA A EE GLLP EY FAK EN - TH G V P AHLMVAN G IV A TIWAAVF tlsgggn NL SF L A AM SL TV V IY L ML Y FMFFAGYLK L 392
Cdd:COG0531 297 RL L YAM A RD GLLP KV FAK VH p RF G T P VNAILLT G VI A LLLLLLG ------- AA SF T A LA SL AS V GV L LA Y LLVALAVIV L 369
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 488252845 393 VFKDDS L E R AYQ VP G gkvvk VIVAC LG L L TS LF AFCISFVPPAS I AAG 440
Cdd:COG0531 370 RRRRPD L P R PFR VP L ----- PLIPI LG I L LC LF LLYLLGPGALL I GLV 412
PRK15238
PRK15238 inner membrane transporter YjeM; Provisional
11-469
7.41e-17
inner membrane transporter YjeM; Provisional
Pssm-ID: 237929 [Multi-domain]
Cd Length: 496
Bit Score: 82.68
E-value: 7.41e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 11 KKL TFF G FLA M TISM V VSLYEY P T - F ATS G F S LVFFLL L GGL L W FIP V AL CA AE MATVKGW EKGG V Y T W VSRTL G KR F G F 89
Cdd:PRK15238 7 KKL SLI G LIL M IFTS V FGFANS P R a F YLM G Y S AIPWYI L SAI L F FIP F AL MM AE YGSAFKD EKGG I Y S W MNKSV G PK F A F 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 90 AAI F F q WF EITVGYL ----- TMLYFLTGAL -- SYA T GIGAIQNNKYLKLAIL L IIF W A IL LSQL -- KG TKYTSLIAR IG F 160
Cdd:PRK15238 87 IGT F M - WF ASYIIWM vstas KIWIPFSTFI fg KDT T QTWHFLGLNSTQVVGI L AVI W M IL VTFV as KG INKIAKVTS IG G 165
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 161 V A GI LL PALV L FGLG I HYVAS G APLQTTLSMKTLI ---- P DFSKLPTLVV FV S F - I L AY M G V E TSASHANEM ENP K K DY P 235
Cdd:PRK15238 166 I A VM LL NIVL L LVSI I ILILN G GHFAQPIGVSSFV tspn P AYQSPIAVLS FV V F a I F AY G G I E AVGGLVDKT ENP E K NF P 245
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 236 LAMFVLV I LAI I LDTFGGLTIATTVPQH ---- GL S L N T G ----- VIQS L EFL L R H --- ID P NLA ----- W I A K I LAILVC 298
Cdd:PRK15238 246 KGIIIAA I VIS I GYSLAIFLWGVSTNWQ qvls NK S V N L G nityv LMNN L GYT L G H alg LS P AAS ltlgv W F A R I TGLSMF 325
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 299 L GVI G EIASWVT SP S K A L HVAAEEG L L P EYFA K E N TH G V PA HL M VANG I VATIW aa VFTL S G GG NNL S - F LAAMS L TVVI 377
Cdd:PRK15238 326 L AYT G AFFTLSY SP L K Q L IEGTPKA L W P KKMT K L N KN G M PA NA M WLQC I IVSVF -- ILLV S F GG DAA S a F FNILT L MANV 403
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 378 YLM L YFM F F AG YLKLVF K DDSLE R AYQ V PGG K VVKV I VACLGL L TSL FA FCISFVP P ASIAAG Q HGIYETILI V SYL I VL 457
Cdd:PRK15238 404 SMT L PYL F L AG AFPFFK K KKDID R PFV V FKT K KSTL I ATIVVV L VVG FA NVFTIIQ P VIEGDY Q STFWMIGGP V FFS I LA 483
490
....*....|..
gi 488252845 458 V I PFTI Y ACRHK 469
Cdd:PRK15238 484 W I IYQN Y EKKMA 495
AA_permease
pfam00324 Amino acid permease;
57-392
1.14e-09
Amino acid permease;
Pssm-ID: 366028 [Multi-domain]
Cd Length: 467
Bit Score: 60.41
E-value: 1.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 57 V A L CAA E MA T v K G WEK GG V YT WV SR T LG KRF GFA aiffqwfeit V G YLTM L YFL T G - AL SYATGIGA IQ ---- NNKYLK L 131
Cdd:pfam00324 45 V M L SLG E IS T - N G PVS GG F YT YA SR F LG PSL GFA ---------- T G WNYW L SWI T V l AL ELTAASIL IQ fwel VPDIPY L 113
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 132 AILLII F WAI L LS - Q L K G T K Y ------- TS LI AR I GFVAG I LLPALV L F G LGIHYV A SGAP L QTTLSMKTLI P D F S K l PT 203
Cdd:pfam00324 114 WVWGAV F LVL L TI i N L V G V K W ygeaefw FA LI KI I AIIGF I IVGIIL L S G GNPNDG A IFRY L GDNGGKNNFP P G F G K - GF 192
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 204 LV VFV SFIL A YM G V E TSASH A N E ME NP K K DY P L A MFVLVILAI I LDTFGG L T I ATT VP QHGLS L NTGVIQSLE - F LLRHI 282
Cdd:pfam00324 193 IS VFV IAFF A FT G I E LVGIA A G E VK NP E K SI P K A ILQVIWRIT I FYILSL L A I GLL VP WNDPG L LNDSASAAS p F VIFFK 272
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 283 DPNLAWI A KILAILVCLGVIGEIA S WVT S P S KA L HVA A EE GL L P EYFA K ENTH GVP AHLM vang I V ATIWAAVFT L SGGG 362
Cdd:pfam00324 273 FLGISGL A PLINAVILTAALSAAN S SLY S G S RM L YSL A RD GL A P KFLK K VDKR GVP LRAI ---- L V SMVISLLAL L LASL 348
330 340 350
....*....|....*....|....*....|.
gi 488252845 363 N NLS - F LAAMSLTVVIY L MLYFMFFAGY L KL 392
Cdd:pfam00324 349 N PAI v F NFLLAISGLSG L IVWGLISLSH L RF 379
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
58-434
7.10e-07
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 51.67
E-value: 7.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 58 AL CA AE MA T VKG w EK GG V Y TWVSRTL G KRFG F ------ AAIFFQWFEITVGYLTML Y F LT GA ls YATGIGAIQNNKYLKL 131
Cdd:TIGR00911 94 AL VY AE LG T TIP - KS GG E Y NYILEVF G PLLA F lrlwie LLVIRPGSQAVNALNFAI Y I LT PV -- FPDCEVPEWAIRLVAV 170
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 132 AIL L IIFWAIL LS QLKG T K ytsli ARIG F V A GI LL PA L VLFGL G IHYVAS G A pl QTT L SM K TLIPDFSKLPTLV V -- F V S 209
Cdd:TIGR00911 171 LCV L LLTLVNC LS VKWA T R ----- VQDI F T A CK LL AL L LIIIT G WVQLGK G G -- VES L NP K NAFEGTETSAGGI V la F Y S 243
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 210 F I L AY M G VETSASHAN E ME NP KKDY P L A MFVLVILAIILDTFGGLTIA T TVPQHG L slntgv IQ SL EFLLRHIDPN L AWI 289
Cdd:TIGR00911 244 G I W AY G G WNYLNFVTE E VK NP YRTL P I A IIISMPIVTFIYVLTNIAYF T VLSPEE L ------ LA SL AVAVDFGERL L GVM 317
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 290 AKILAI LV C L GVI G EIASWVT S P S KALH V AAE EG L LP EYFAKENTH --- GV P AH L M V - ANGIVATIWAAVFT L S ggg N NL 365
Cdd:TIGR00911 318 SWAMPA LV G L SCF G SVNGSLF S S S RLFF V GGR EG H LP SLLSMIHVK rlt PL P SL L I V c TLTLLMLFSGDIYS L I --- N LI 394
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 488252845 366 SF la A MS L tvviylm LYFMFF AG Y L K L VF K DDSLE R AYQ VP ggkvvk VIVACLG LL TS LF AFCI S FVP P 434
Cdd:TIGR00911 395 SF -- A NW L ------- FNALAV AG L L W L RY K RPEMN R PIK VP ------ LFFPVFF LL SC LF LIIL S LYS P 448
potE
PRK10655 putrescine transporter; Provisional
213-426
9.60e-07
putrescine transporter; Provisional
Pssm-ID: 182622
Cd Length: 438
Bit Score: 51.18
E-value: 9.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 213 A YM G V E TSASHANEM ENP KKDY P L A MFVLVIL A IILDTFGGLT IA TT VP QHG L SLN T GVI q S L E F L l RHID P nla WIA KI 292
Cdd:PRK10655 201 A FL G L E SACANSDAV ENP ERNV P I A VLGGTLG A AVIYIVSTNV IA GI VP NME L ANS T APF - G L A F A - QMFN P --- TVG KI 275
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 293 LAI L VCLGVI G EIAS W VTSPSKALHVA A E EG LL P EY F AKENTHGV P AHL M VANGIVATI w AAVF T L S GGG N N l S F LAAMS 372
Cdd:PRK10655 276 VMA L MVMSCC G SLLG W QFTIAQVFKSS A D EG YF P KI F SRVTKVDA P VQG M LIIVVIQSL - LSLM T I S PSL N S - Q F NVLVN 353
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 488252845 373 L T VV IYLML Y FMFF A GYL klvfkdd SLERAYQ VP GG K - V V KVIV A CL G L L T S LF A 426
Cdd:PRK10655 354 L A VV TNIIP Y ILSM A ALV ------- IIQKVAN VP PS K a K V ANFI A FV G A L Y S FY A 401
PRK11021
PRK11021 putative transporter; Provisional
205-380
3.42e-06
putative transporter; Provisional
Pssm-ID: 236823 [Multi-domain]
Cd Length: 410
Bit Score: 49.14
E-value: 3.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 205 V V F VS F I laym G V E TS A SH A N E ME NP KK D Y P L A MFVLVI LA II ld TFGGL T IAT - TV P QH G LSLNTGV iq SL EFLLRH - I 282
Cdd:PRK11021 185 V M F WC F V ---- G I E AF A HL A S E FK NP ER D F P R A LMIGLL LA GL -- VYWAC T VVV l HF P AY G DKQAAAA -- SL PGIFVQ l F 256
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 283 DPNLA W IAKILAI L V C L gvigei AS --- WVT S PSKALHVA A E EG LL P E Y F A KENTH GVP AHLMV A NGIVATIWAAVFTLS 359
Cdd:PRK11021 257 GGYAL W VICVIGY L A C F ------ AS vni YTQ S FARLVWSQ A R EG RP P S Y L A RLSAR GVP VNALN A VLGCCAVSILLIYAL 330
170 180
....*....|....*....|...
gi 488252845 360 gg G N NL SF L A A MS -- LT V V IYL M 380
Cdd:PRK11021 331 -- G L NL EA L I A YA ng IF V L IYL L 351
PRK11387
PRK11387 S-methylmethionine permease;
147-338
5.59e-06
S-methylmethionine permease;
Pssm-ID: 236904
Cd Length: 471
Bit Score: 48.69
E-value: 5.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 147 K G TKYT SLI ARIGFV A G I L L PALVL FG LGIHYVA S G AP LQTT L SMKTLI P D f SK LP T L VVF V SFIL A YM G V E TSASH A N E 226
Cdd:PRK11387 153 E G EFWF SLI KVVTIL A F I V L GGAAI FG FIPMQDG S P AP GLRN L TAEGWF P H - GG LP I L MTM V AVNF A FS G T E LIGIA A G E 231
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 227 M ENP K K DY P L A MFVLVILAI I LDTFGG L TI A TTV P QH glsl NT GV IQ S l E F L L RHIDPNLAWI A K I LAILVCLGVIGEIA 306
Cdd:PRK11387 232 T ENP A K VI P V A IRTTIARLV I FFVGTV L VL A ALI P MQ ---- QA GV EK S - P F V L VFEKVGIPYA A D I FNFVILTAILSAAN 306
170 180 190
....*....|....*....|....*....|..
gi 488252845 307 S WVTSPSKA L HVAAE EG L LP EY FA KENTH G V P 338
Cdd:PRK11387 307 S GLYASGRM L WSLSN EG T LP AC FA RLTKR G I P 338
PRK10644
PRK10644 arginine/agmatine antiporter;
73-351
2.86e-05
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain]
Cd Length: 445
Bit Score: 46.32
E-value: 2.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 73 GG V Y TWVS R TL G KRF G FAAIFFQ W FEITV G YLT M LYFLT G A LSY ATG I ga IQNNKY L KLAILLII f W AIL L SQLK G T K yt 152
Cdd:PRK10644 71 GG S Y AYAR R CF G PFL G YQTNVLY W LACWI G NIA M VVIGV G Y LSY FFP I -- LKDPLV L TITCVVVL - W IFV L LNIV G P K -- 145
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 153 s L I A R IGF VA GI -- L L P -- ALVL FG L ---- G IH Y V A -------- SGAPL Q T TL SMK tlipdfsklptlvvfvsf ILAYM G 216
Cdd:PRK10644 146 - M I T R VQA VA TV la L I P iv GIAV FG W fwfr G ET Y M A awnvsglg TFGAI Q S TL NVT ------------------ LWSFI G 206
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 217 VE TSASH A NEME NPK KDY P L A MFVL V IL A IILDTFGGLT I ATTV P QHG L SLN tgviq SLE F LLRHIDPNLAWIAK I LAIL 296
Cdd:PRK10644 207 VE SASVA A GVVK NPK RNV P I A TIGG V LI A AVCYVLSSTA I MGMI P NAA L RVS ----- ASP F GDAARMALGDTAGA I VSFC 281
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 488252845 297 VCL G VI G EIAS W VTSPSKALHV AA EE GL L P EY FA KE N TH G V P AHLMVAN G IVA TI 351
Cdd:PRK10644 282 AAA G CL G SLGG W TLLAGQTAKA AA DD GL F P PI FA RV N KA G T P VAGLLIV G VLM TI 336
2A0310
TIGR00913 amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
55-372
1.60e-04
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273334
Cd Length: 478
Bit Score: 44.20
E-value: 1.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 55 IP V ALCAA EMAT VKGWEK G GVY T WV SR TLGKR FGFA aiffqwfeit VG YLTM L - YFLTGA L SYA T GIGA IQ N - NKYLKL A 132
Cdd:TIGR00913 50 YC V MQSLG EMAT FYPVVS G SFA T YA SR FVDPA FGFA ---------- VG WNYW L q WLIVLP L ELV T ASMT IQ Y w TDKVNP A 119
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 133 ILLI IF WAILLS - Q L K G T K Y tsl IARIG F VAGIL -- L PALVLFG L G I HYVAS G A P LQTTL --------- SMKTLIPDFSK 200
Cdd:TIGR00913 120 VWIA IF YVFIVI i N L F G V K G --- YGEAE F WFSSI ki L AIIGFII L S I ILNCG G G P NHGYI gfrywhdpg AFAGGTIGGRF 196
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 201 LPTLV VFV SFILAYM G V E TS A SH A N E ME NP K K DY P L A ---- MFVLVILA I ILDTFG G LTIATTV P QHGL S LNTGVIQSLE 276
Cdd:TIGR00913 197 KGVCS VFV TAAFSFG G T E LV A LT A G E AA NP R K SI P R A akrt FWRILVFY I LTLFLI G FLVPYND P RLLS S SSSSDSAASP 276
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488252845 277 F LLRHIDPNLAWIAK I LAILVCLG V IGEIA S WVTSP S KA L HVA A EE GL L P EY FA KENTH GVP AHLMVANGIVATI w A AVF 356
Cdd:TIGR00913 277 F VIAIQNHGIKVLPH I FNAVILIS V LSAAN S SLYAS S RT L YAL A HQ GL A P KI FA YVDRR GVP YVAVIVSSLFGLL - A FLA 355
330
....*....|....*.
gi 488252845 357 TLSGGGNNLSF L AAM S 372
Cdd:TIGR00913 356 VSKKEAEVFTW L LNI S 371
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
