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Conserved domains on  [gi|488286754|ref|WP_002357962|]
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MULTISPECIES: YtxH domain-containing protein [Enterococcus]

Protein Classification

YtxH domain-containing protein( domain architecture ID 10578986)

YtxH domain-containing protein similar to Gallus gallus cell cycle progression protein 1 that may be involved in the regulation of Rho-mediated signaling pathways and in cell cycle regulation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YtxH pfam12732
YtxH-like protein; This family of proteins is found in bacteria. Proteins in this family are ...
 29-79 2.74e-04

YtxH-like protein; This family of proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved. Proteins is this family are functionally uncharacterized.


:

Pssm-ID: 432750 [Multi-domain]  Cd Length: 71  Bit Score: 35.66  E-value: 2.74e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 488286754  29 DKGKELEGKAQSTFADVKDKARDAGDDLKEGAEKLTDKVKEGFEDLKDKFS 79
Cdd:pfam12732 21 KSGKETRKDLKDKAEDLKDKAKDLAEEAKEKAEDLKEKVKEKADELKEKVK 71
 
Name Accession Description Interval E-value
YtxH pfam12732
YtxH-like protein; This family of proteins is found in bacteria. Proteins in this family are ...
 29-79 2.74e-04

YtxH-like protein; This family of proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved. Proteins is this family are functionally uncharacterized.


Pssm-ID: 432750 [Multi-domain]  Cd Length: 71  Bit Score: 35.66  E-value: 2.74e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 488286754  29 DKGKELEGKAQSTFADVKDKARDAGDDLKEGAEKLTDKVKEGFEDLKDKFS 79
Cdd:pfam12732 21 KSGKETRKDLKDKAEDLKDKAKDLAEEAKEKAEDLKEKVKEKADELKEKVK 71
 
Name Accession Description Interval E-value
YtxH pfam12732
YtxH-like protein; This family of proteins is found in bacteria. Proteins in this family are ...
 29-79 2.74e-04

YtxH-like protein; This family of proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved. Proteins is this family are functionally uncharacterized.


Pssm-ID: 432750 [Multi-domain]  Cd Length: 71  Bit Score: 35.66  E-value: 2.74e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 488286754  29 DKGKELEGKAQSTFADVKDKARDAGDDLKEGAEKLTDKVKEGFEDLKDKFS 79
Cdd:pfam12732 21 KSGKETRKDLKDKAEDLKDKAKDLAEEAKEKAEDLKEKVKEKADELKEKVK 71
CsbD pfam05532
CsbD-like; CsbD is a bacterial general stress response protein. It's expression is mediated by ...
 7-58 8.72e-04

CsbD-like; CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.


Pssm-ID: 428512  Cd Length: 53  Bit Score: 34.02  E-value: 8.72e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 488286754   7 RFDDAKDKVEGTAKEAQGKVTDDKGKELEGKAQSTFADVKDKARDAGDDLKE 58
Cdd:pfam05532  2 KIEGKAEQVKGKVKEAWGKATGDEKLEAEGKADQLKGKAQQKYGDAKDAAKD 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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