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Conserved domains on  [gi|488288398|ref|WP_002359606|]
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MULTISPECIES: F0F1 ATP synthase subunit gamma [Enterococcus]

Protein Classification

FoF1 ATP synthase subunit gamma( domain architecture ID 10792582)

FoF1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

EC:  7.1.2.2
Gene Ontology:  GO:0045261|GO:0005524|GO:0046933|GO:0042777
PubMed:  25730883|30888962|25667968|18216260|8951091
SCOP:  4000503

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 2-301 1.91e-147

F0F1 ATP synthase subunit gamma; Validated


:

Pssm-ID: 235535  Cd Length: 284  Bit Score: 415.28  E-value: 1.91e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   2 GASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAQLSElreteqsslsegnyHVM 81
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD--------------HPL 66

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  82 LAQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFE 161
Cdd:PRK05621  67 LVEREVKRVGYIVVTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFE 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 162 EVRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYllEPSPEAILDQLLPQYAESL 241
Cdd:PRK05621 147 EAIGIAKKLLDAYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEY--EPDAEEILDALLPRYVESQ 224

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 242 IYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:PRK05621 225 IYQALLENKASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 2-301 1.91e-147

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 415.28  E-value: 1.91e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   2 GASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAQLSElreteqsslsegnyHVM 81
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD--------------HPL 66

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  82 LAQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFE 161
Cdd:PRK05621  67 LVEREVKRVGYIVVTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFE 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 162 EVRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYllEPSPEAILDQLLPQYAESL 241
Cdd:PRK05621 147 EAIGIAKKLLDAYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEY--EPDAEEILDALLPRYVESQ 224

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 242 IYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:PRK05621 225 IYQALLENKASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 3-301 1.29e-131

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 375.26  E-value: 1.29e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAqlselreteqsslSEGNYHVML 82
Cdd:COG0224    2 ASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAA-------------SPEYDHPLL 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 AQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFEE 162
Cdd:COG0224   69 EEREVKRVGLIVITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFED 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEA-TSYEQEYLLEPSPEAILDQLLPQYAESL 241
Cdd:COG0224  149 AKEIAEELLDAFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAeWETRADYIFEPSPEEILDALLPRYLESQ 228

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 242 IYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:COG0224  229 IYQALLESAASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 3-301 5.95e-130

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 370.86  E-value: 5.95e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398    3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAQLselreteqsslseGNYHVML 82
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLL-------------NVDHPLL 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   83 AQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFEE 162
Cdd:TIGR01146  68 KSREVKKVGILVITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEE 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYLLEPSPEAILDQLLPQYAESLI 242
Cdd:TIGR01146 148 ASGIADKLLDAFDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQI 227

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 488288398  243 YGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:TIGR01146 228 YGALLESAASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
ATP-synt pfam00231
ATP synthase;
4-300 2.87e-126

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 361.46  E-value: 2.87e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398    4 SLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAqlselreteqsslSEGNYHVMLA 83
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAA-------------SPEDSHPLLE 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   84 QRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLT-DQPTFEE 162
Cdd:pfam00231  68 RREVKKVGLIVITSDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSLgDKPTFEE 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYLLEPSPEAILDQLLPQYAESLI 242
Cdd:pfam00231 148 AAEIADELLDAFLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQI 227

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 488288398  243 YGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAA 300
Cdd:pfam00231 228 YGALLESAASEQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 3-298 3.28e-104

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 305.66  E-value: 3.28e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAQLSELreteqsslsegnyHVML 82
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDED-------------PPLL 67

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 AQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDsnKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFEE 162
Cdd:cd12151   68 EKREVKKVLLIVITSDRGLCGGFNSNIIKAAEELIKEADG--KEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFE 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATS-YEQEYLLEPSPEAILDQLLPQYAESL 241
Cdd:cd12151  146 AASIIEELILDFLNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEgSRSDYIFEPDPEEVLDALLPFYLASL 225

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 488288398 242 IYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGA 298
Cdd:cd12151  226 LYRALLESLASEQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 2-301 1.91e-147

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 415.28  E-value: 1.91e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   2 GASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAQLSElreteqsslsegnyHVM 81
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD--------------HPL 66

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  82 LAQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFE 161
Cdd:PRK05621  67 LVEREVKRVGYIVVTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFE 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 162 EVRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYllEPSPEAILDQLLPQYAESL 241
Cdd:PRK05621 147 EAIGIAKKLLDAYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEY--EPDAEEILDALLPRYVESQ 224

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 242 IYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:PRK05621 225 IYQALLENKASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 3-301 1.29e-131

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 375.26  E-value: 1.29e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAqlselreteqsslSEGNYHVML 82
Cdd:COG0224    2 ASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAA-------------SPEYDHPLL 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 AQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFEE 162
Cdd:COG0224   69 EEREVKRVGLIVITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFED 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEA-TSYEQEYLLEPSPEAILDQLLPQYAESL 241
Cdd:COG0224  149 AKEIAEELLDAFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAeWETRADYIFEPSPEEILDALLPRYLESQ 228

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 242 IYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:COG0224  229 IYQALLESAASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 3-301 5.95e-130

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 370.86  E-value: 5.95e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398    3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAQLselreteqsslseGNYHVML 82
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLL-------------NVDHPLL 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   83 AQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFEE 162
Cdd:TIGR01146  68 KSREVKKVGILVITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEE 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYLLEPSPEAILDQLLPQYAESLI 242
Cdd:TIGR01146 148 ASGIADKLLDAFDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQI 227

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 488288398  243 YGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:TIGR01146 228 YGALLESAASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
ATP-synt pfam00231
ATP synthase;
4-300 2.87e-126

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 361.46  E-value: 2.87e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398    4 SLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAqlselreteqsslSEGNYHVMLA 83
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAA-------------SPEDSHPLLE 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   84 QRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLT-DQPTFEE 162
Cdd:pfam00231  68 RREVKKVGLIVITSDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSLgDKPTFEE 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYLLEPSPEAILDQLLPQYAESLI 242
Cdd:pfam00231 148 AAEIADELLDAFLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQI 227

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 488288398  243 YGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAA 300
Cdd:pfam00231 228 YGALLESAASEQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 3-298 3.28e-104

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 305.66  E-value: 3.28e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAQLSELreteqsslsegnyHVML 82
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDED-------------PPLL 67

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 AQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDsnKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFEE 162
Cdd:cd12151   68 EKREVKKVLLIVITSDRGLCGGFNSNIIKAAEELIKEADG--KEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFE 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATS-YEQEYLLEPSPEAILDQLLPQYAESL 241
Cdd:cd12151  146 AASIIEELILDFLNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEgSRSDYIFEPDPEEVLDALLPFYLASL 225

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 488288398 242 IYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGA 298
Cdd:cd12151  226 LYRALLESLASEQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 3-302 4.93e-79

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 241.62  E-value: 4.93e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAaqlselreteqSSLSEGNYHVML 82
Cdd:PRK14111   2 PSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTA-----------RTVGAARVGPLL 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 AQRP-VKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFE 161
Cdd:PRK14111  71 EKRPtVKRVALILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLE 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 162 EVRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDldPSEATSYEQEYLLEPSPEAILDQLLPQYAESL 241
Cdd:PRK14111 151 AILPVATSAINGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEP--PEISTTTVVDYTYEPSPEEVLRALLPRFVEVQ 228

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488288398 242 IYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAALE 302
Cdd:PRK14111 229 LYQAVLESIASEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAALG 289
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 3-301 1.56e-78

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 240.34  E-value: 1.56e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAQlselreteqsslsEGNYHVML 82
Cdd:PRK13423   2 ASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARA-------------GEDAHPLL 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 AQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFEE 162
Cdd:PRK13423  69 VPREVKKALLVVVTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYET 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPItDLDPSEATSYEQEYLLEPSPEAILDQLLPQYAESLI 242
Cdd:PRK13423 149 AALLAQELIEGYLAGEYDEVYLVYNEFKSVMSQDITVQQLLPI-DPPEAADDEYLPEYIYEPSRDALLAELLPKHVEVQI 227

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 488288398 243 YGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:PRK13423 228 YRALLESVASEHGARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEAL 286
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 3-302 4.18e-66

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 208.90  E-value: 4.18e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVthlvaAQLSELRETEQSSLsegnyhvmL 82
Cdd:PRK13425   2 PTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEML-----GSLSAKVDTSLNPL--------L 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 AQRP-VKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDH---DSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQP 158
Cdd:PRK13425  69 SPRSeVNKVLVILITSDRGLCGAFNTNIIKLAQKVIHEDYaalHAKGGVSMICAGTRGFDFFRKRGYNIVKGYPGVFQNL 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 159 TFEEVRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSyeQEYLLEPSPEAILDQLLPQYA 238
Cdd:PRK13425 149 DFSVAKEIAETASGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEKPGAEGG--SDYIYEPSPAAIIDELVPKHL 226

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488288398 239 ESLIYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAALE 302
Cdd:PRK13425 227 NTQVWRMMLESNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADALQ 290
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 3-301 4.81e-58

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 188.06  E-value: 4.81e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAQLSElreteQSSLSEgnyhvml 82
Cdd:PRK13426   2 ASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLDV-----ESPFTV------- 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 aQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALI-AIGGTGADFFKARGIDVSYELRGLTDQPTFE 161
Cdd:PRK13426  70 -ERPVKRVAIVVFSSNTSLCGGFNANIIKLLLQTIGEYRTLGQDNILIyPVGKKIEEAVKKLGFKVQGDYQTLADKPSYE 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 162 EVRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPI---TDLDPSEATSYEQEYLLEPSPEAILDQLLPQYA 238
Cdd:PRK13426 149 EAAALAMRLMELFLEGEIDKVELIYHHFKSMGVQVLTRETYLPIdlsQEKNAEHAGGVANDYIIEPSADTVLNDLIPKLL 228

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488288398 239 ESLIYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:PRK13426 229 SLKIYTALLDSNASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 3-302 7.51e-58

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 187.46  E-value: 7.51e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLvaaqlselreteqSSLsEGNYHVML 82
Cdd:PRK13427   2 ATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSL-------------ASL-EGVVHSPY 67

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 AQRP--VKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTF 160
Cdd:PRK13427  68 LRRPekIRTVALLIITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGY 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 161 EEVRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYLLEPSPEAILDQLLPQYAES 240
Cdd:PRK13427 148 KEAEELANLFMERFANESVDAVEIASTVYYSAASQKPETTRVLPLEPPTAAAEGSVQDDVVYEPSPEAILESLLPLVVKT 227

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488288398 241 LIYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAALE 302
Cdd:PRK13427 228 AFLKAILEANASEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADALN 289
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 3-302 5.85e-55

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 179.94  E-value: 5.85e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   3 ASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVvthlvaaqLSELreteqSSLSEGNYHVML 82
Cdd:PRK13424   2 PSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDM--------LGDL-----ASRADSSAHPLL 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  83 AQRPVKKT-GYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFE 161
Cdd:PRK13424  69 EVREEIKTcGIVLITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEIVTAYADQMTSFDFQ 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 162 EVRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPI-TDLDPSEATSYEQEYLLEPSPEAILDQLLPQYAES 240
Cdd:PRK13424 149 LANSIGLEVIDGYLTGELDEVVLVYGEFVSMARQLPITLQILPIaPEEAEEEEAGASSEYIYEPSVEGLLAELLPRFIKV 228

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488288398 241 LIYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAALE 302
Cdd:PRK13424 229 QIYRGLLDTSASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEALK 290
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 4-302 7.94e-51

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 169.56  E-value: 7.94e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   4 SLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLvaaqlselreteqSSLSEGNYHVMLA 83
Cdd:PRK14110   5 SPRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDL-------------AAHIDRESHPLLE 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  84 QRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFKARGIDV--SYElRGLTDQPTFE 161
Cdd:PRK14110  72 RREEKNVDLVIITADRGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIikSYE-DVFRKEINFS 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 162 EVRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYLLEPSPEAILDQLLPQYAESL 241
Cdd:PRK14110 151 VVKEVGGILASRYIEEETDAVYLINNEMITRATYKPKVRKFLPFEVEAQEKKLDELSVYNIEVSEEEFLDKLLQLYLNYQ 230

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488288398 242 IYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAALE 302
Cdd:PRK14110 231 LYRALVESNAAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAMK 291
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 7-301 2.53e-38

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 137.10  E-value: 2.53e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398   7 EIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAAqlselreteqsSLSEGNYHvmLAQRP 86
Cdd:PRK13422   6 EIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAA-----------SIDYPNPY--LFDRD 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398  87 VKKTGYIVITSDKGLVGGYNSSILKQTMSMIQEDHDSNKEYALIAIGGTGADFFkARGIDV----SYELRGLTDQPTFEE 162
Cdd:PRK13422  73 VKRVGYIVTSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFF-AKLKDVnivaTAHYNDKDKEGSIRA 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288398 163 VRKIVTTATTMYQNEVFDELYVCYNHHVNSLTSQFRVEKMLPITDL--------DPSEATSYEQEYLLEPSPEAILDQLL 234
Cdd:PRK13422 152 IGGAVKVMLDKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIfsaeeikaNKEKATKGHWDYIYERDIEEVLNALC 231

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 488288398 235 PQYAESLIYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAAL 301
Cdd:PRK13422 232 IRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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