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Conserved domains on  [gi|488288924|ref|WP_002360132|]
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MULTISPECIES: 5-(carboxyamino)imidazole ribonucleotide mutase [Enterococcus]

Protein Classification

5-(carboxyamino)imidazole ribonucleotide mutase( domain architecture ID 10000490)

5-(carboxyamino)imidazole ribonucleotide mutase catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR), a step in de novo purine nucleotide biosynthesis

CATH:  3.40.50.7700
EC:  5.4.99.18
PubMed:  36748301|33179964
SCOP:  4003688

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PurE COG0041
Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; ...
3-162 1.23e-99

Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase is part of the Pathway/BioSystem: Purine biosynthesis


:

Pssm-ID: 439811  Cd Length: 161  Bit Score: 283.49  E-value: 1.23e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924   3 PLVAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTLP 82
Cdd:COG0041    1 PKVGIIMGSDSDWPTMKKAAKILDEFGIPYEVRVVSAHRTPDRLFEYAKTAEERGLKVIIAGAGGAAHLPGMVAAKTTLP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924  83 VIGVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGsaGATNAGLLAAEILSIDDLQLAERIQARRQSLEKAVMESGEQLE 162
Cdd:COG0041   81 VIGVPVKSKALDGLDSLLSIVQMPPGVPVATVAIG--GAKNAALLAAQILALKDPELAEKLKAYREEQTEKVLAKDEELQ 158
 
Name Accession Description Interval E-value
PurE COG0041
Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; ...
3-162 1.23e-99

Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439811  Cd Length: 161  Bit Score: 283.49  E-value: 1.23e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924   3 PLVAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTLP 82
Cdd:COG0041    1 PKVGIIMGSDSDWPTMKKAAKILDEFGIPYEVRVVSAHRTPDRLFEYAKTAEERGLKVIIAGAGGAAHLPGMVAAKTTLP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924  83 VIGVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGsaGATNAGLLAAEILSIDDLQLAERIQARRQSLEKAVMESGEQLE 162
Cdd:COG0041   81 VIGVPVKSKALDGLDSLLSIVQMPPGVPVATVAIG--GAKNAALLAAQILALKDPELAEKLKAYREEQTEKVLAKDEELQ 158
AIRC pfam00731
AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl) ...
5-153 2.43e-86

AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 459917  Cd Length: 147  Bit Score: 249.21  E-value: 2.43e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924    5 VAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTLPVI 84
Cdd:pfam00731   1 VGIIMGSDSDLPVMKKAAKILKEFGIPYEVRVVSAHRTPERLLEYAKEAEERGLKVIIAGAGGAAHLPGMVAALTTLPVI 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 488288924   85 GVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGsaGATNAGLLAAEILSIDDLQLAERIQARRQSLEKA 153
Cdd:pfam00731  81 GVPVKSSALDGLDSLLSIVQMPSGVPVATVAIG--GAKNAALLAAQILALSDPELAEKLKEYREEMAEK 147
AIRC smart01001
AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl) ...
3-154 3.23e-82

AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyse the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 214965  Cd Length: 152  Bit Score: 238.97  E-value: 3.23e-82
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924     3 PLVAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTLP 82
Cdd:smart01001   1 PLVGIIMGSTSDLPVMEEAAKTLEEFGIPYEVGVASAHRTPDRLFEYAKEAEDRGIKVIIAGAGGAAHLPGVVAALTTLP 80
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488288924    83 VIGVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGSAGATNAGLLAAEILSIDDLQLAERIQARRQSLEKAV 154
Cdd:smart01001  81 VIGVPVSSGYLGGLDSLLSIVQMPSGIPVATVAIGIDGAFNAALLAAQILALNDPELAAKLAAYRINQTEEV 152
purE TIGR01162
phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole ...
5-162 9.95e-81

phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273474  Cd Length: 156  Bit Score: 235.59  E-value: 9.95e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924    5 VAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTLPVI 84
Cdd:TIGR01162   1 VGIIMGSDSDLPTMKKAADILEEFGIPYELRVVSAHRTPELMLEYAKTAEERGIKVIIAGAGGAAHLPGMVAALTPLPVI 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488288924   85 GVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGSAGatNAGLLAAEILSIDDLQLAERIQARRQSLEKAVMESGEQLE 162
Cdd:TIGR01162  81 GVPVPSKALSGLDSLLSIVQMPSGVPVATVAIGNAG--NAALLAAQILGIKDPELAEKLKEYRENQKEEVLKKNKKLE 156
PLN02948 PLN02948
phosphoribosylaminoimidazole carboxylase
2-162 1.19e-75

phosphoribosylaminoimidazole carboxylase


Pssm-ID: 178534 [Multi-domain]  Cd Length: 577  Bit Score: 235.72  E-value: 1.19e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924   2 KPLVAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTL 81
Cdd:PLN02948 410 TPLVGIIMGSDSDLPTMKDAAEILDSFGVPYEVTIVSAHRTPERMFSYARSAHSRGLQVIIAGAGGAAHLPGMVASMTPL 489
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924  82 PVIGVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGSagATNAGLLAAEILSIDDLQLAERIQARRQSLEKAVMESGEQL 161
Cdd:PLN02948 490 PVIGVPVKTSHLDGLDSLLSIVQMPRGVPVATVAIGN--ATNAGLLAVRMLGASDPDLLDKMEAYQEDMRDMVLEKAEKL 567

                 .
gi 488288924 162 E 162
Cdd:PLN02948 568 E 568
 
Name Accession Description Interval E-value
PurE COG0041
Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; ...
3-162 1.23e-99

Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439811  Cd Length: 161  Bit Score: 283.49  E-value: 1.23e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924   3 PLVAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTLP 82
Cdd:COG0041    1 PKVGIIMGSDSDWPTMKKAAKILDEFGIPYEVRVVSAHRTPDRLFEYAKTAEERGLKVIIAGAGGAAHLPGMVAAKTTLP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924  83 VIGVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGsaGATNAGLLAAEILSIDDLQLAERIQARRQSLEKAVMESGEQLE 162
Cdd:COG0041   81 VIGVPVKSKALDGLDSLLSIVQMPPGVPVATVAIG--GAKNAALLAAQILALKDPELAEKLKAYREEQTEKVLAKDEELQ 158
AIRC pfam00731
AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl) ...
5-153 2.43e-86

AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 459917  Cd Length: 147  Bit Score: 249.21  E-value: 2.43e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924    5 VAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTLPVI 84
Cdd:pfam00731   1 VGIIMGSDSDLPVMKKAAKILKEFGIPYEVRVVSAHRTPERLLEYAKEAEERGLKVIIAGAGGAAHLPGMVAALTTLPVI 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 488288924   85 GVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGsaGATNAGLLAAEILSIDDLQLAERIQARRQSLEKA 153
Cdd:pfam00731  81 GVPVKSSALDGLDSLLSIVQMPSGVPVATVAIG--GAKNAALLAAQILALSDPELAEKLKEYREEMAEK 147
AIRC smart01001
AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl) ...
3-154 3.23e-82

AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyse the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 214965  Cd Length: 152  Bit Score: 238.97  E-value: 3.23e-82
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924     3 PLVAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTLP 82
Cdd:smart01001   1 PLVGIIMGSTSDLPVMEEAAKTLEEFGIPYEVGVASAHRTPDRLFEYAKEAEDRGIKVIIAGAGGAAHLPGVVAALTTLP 80
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488288924    83 VIGVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGSAGATNAGLLAAEILSIDDLQLAERIQARRQSLEKAV 154
Cdd:smart01001  81 VIGVPVSSGYLGGLDSLLSIVQMPSGIPVATVAIGIDGAFNAALLAAQILALNDPELAAKLAAYRINQTEEV 152
purE TIGR01162
phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole ...
5-162 9.95e-81

phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273474  Cd Length: 156  Bit Score: 235.59  E-value: 9.95e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924    5 VAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTLPVI 84
Cdd:TIGR01162   1 VGIIMGSDSDLPTMKKAADILEEFGIPYELRVVSAHRTPELMLEYAKTAEERGIKVIIAGAGGAAHLPGMVAALTPLPVI 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488288924   85 GVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGSAGatNAGLLAAEILSIDDLQLAERIQARRQSLEKAVMESGEQLE 162
Cdd:TIGR01162  81 GVPVPSKALSGLDSLLSIVQMPSGVPVATVAIGNAG--NAALLAAQILGIKDPELAEKLKEYRENQKEEVLKKNKKLE 156
PLN02948 PLN02948
phosphoribosylaminoimidazole carboxylase
2-162 1.19e-75

phosphoribosylaminoimidazole carboxylase


Pssm-ID: 178534 [Multi-domain]  Cd Length: 577  Bit Score: 235.72  E-value: 1.19e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924   2 KPLVAVIMGSTSDWATMKAACLVLEELGIPYEKRVISAHRTPDLMFRFAEESRTKGLKVIIAGAGGAAHLPGMVAAKTTL 81
Cdd:PLN02948 410 TPLVGIIMGSDSDLPTMKDAAEILDSFGVPYEVTIVSAHRTPERMFSYARSAHSRGLQVIIAGAGGAAHLPGMVASMTPL 489
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488288924  82 PVIGVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGSagATNAGLLAAEILSIDDLQLAERIQARRQSLEKAVMESGEQL 161
Cdd:PLN02948 490 PVIGVPVKTSHLDGLDSLLSIVQMPRGVPVATVAIGN--ATNAGLLAVRMLGASDPDLLDKMEAYQEDMRDMVLEKAEKL 567

                 .
gi 488288924 162 E 162
Cdd:PLN02948 568 E 568
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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