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Conserved domains on  [gi|488314016|ref|WP_002383401|]
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MULTISPECIES: DUF3397 domain-containing protein [Enterococcus]

Protein Classification

DUF3397 domain-containing protein( domain architecture ID 10570932)

DUF3397 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3397 pfam11877
Protein of unknown function (DUF3397); This family of proteins are functionally ...
 15-125 1.24e-18

Protein of unknown function (DUF3397); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 114 to 128 amino acids in length.


:

Pssm-ID: 432154  Cd Length: 112  Bit Score: 75.31  E-value: 1.24e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488314016   15 MLFWYIFPVIVLFACNFLVSTFSLTE-RWKIKAPDLAIPFLFIGIHELSKDSYDESIMPYFVISILLLGVAVALFQAYYY 93
Cdd:pfam11877   1 IATIILFPLLVFLLVYFIVKKFRLKKkKAILLAADVTTPFLIIAVHFLSLVIFGISFLPYILLFLLILAIILAIIQARKK 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 488314016   94 GEILYRRYFKMFWRLTFLLTFVLYVLLILLNI 125
Cdd:pfam11877  81 GEISYKRFFKLFWRLLFLLTFFLYLLLLIVGI 112
 
Name Accession Description Interval E-value
DUF3397 pfam11877
Protein of unknown function (DUF3397); This family of proteins are functionally ...
 15-125 1.24e-18

Protein of unknown function (DUF3397); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 114 to 128 amino acids in length.


Pssm-ID: 432154  Cd Length: 112  Bit Score: 75.31  E-value: 1.24e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488314016   15 MLFWYIFPVIVLFACNFLVSTFSLTE-RWKIKAPDLAIPFLFIGIHELSKDSYDESIMPYFVISILLLGVAVALFQAYYY 93
Cdd:pfam11877   1 IATIILFPLLVFLLVYFIVKKFRLKKkKAILLAADVTTPFLIIAVHFLSLVIFGISFLPYILLFLLILAIILAIIQARKK 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 488314016   94 GEILYRRYFKMFWRLTFLLTFVLYVLLILLNI 125
Cdd:pfam11877  81 GEISYKRFFKLFWRLLFLLTFFLYLLLLIVGI 112
 
Name Accession Description Interval E-value
DUF3397 pfam11877
Protein of unknown function (DUF3397); This family of proteins are functionally ...
 15-125 1.24e-18

Protein of unknown function (DUF3397); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 114 to 128 amino acids in length.


Pssm-ID: 432154  Cd Length: 112  Bit Score: 75.31  E-value: 1.24e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488314016   15 MLFWYIFPVIVLFACNFLVSTFSLTE-RWKIKAPDLAIPFLFIGIHELSKDSYDESIMPYFVISILLLGVAVALFQAYYY 93
Cdd:pfam11877   1 IATIILFPLLVFLLVYFIVKKFRLKKkKAILLAADVTTPFLIIAVHFLSLVIFGISFLPYILLFLLILAIILAIIQARKK 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 488314016   94 GEILYRRYFKMFWRLTFLLTFVLYVLLILLNI 125
Cdd:pfam11877  81 GEISYKRFFKLFWRLLFLLTFFLYLLLLIVGI 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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