NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|488322222|ref|WP_002391607|]
View 

MULTISPECIES: cyclopropane-fatty-acyl-phospholipid synthase family protein [Enterococcus]

Protein Classification

SAM-dependent methyltransferase( domain architecture ID 11454891)

SAM-dependent methyltransferase catalyzes the methylation of one or more specific substrates using S-adenosyl-L-methionine (SAM or AdoMet) as the methyl donor

CATH:  2.20.25.110
EC:  2.1.-.-
SCOP:  3000118

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
CMAS super family cl47167
Mycolic acid cyclopropane synthetase; This family consist of ...
106-372 4.58e-113

Mycolic acid cyclopropane synthetase; This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.


The actual alignment was detected with superfamily member pfam02353:

Pssm-ID: 481507 [Multi-domain]  Cd Length: 272  Bit Score: 331.21  E-value: 4.58e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  106 SKKRSQEDIHSHYDLGNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLILTAV 185
Cdd:pfam02353   1 SKTRDAENIQAHYDLSNDFFALFLDPTMTYSCAYFERPDMTLEEAQQAKLDLILDKLGLKPGMTLLDIGCGWGGLMRRAA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  186 KEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKGEsFDHITSVGMFEHVGAENLHEYFDVVQRNLAPKG 265
Cdd:pfam02353  81 ERYDVNVVGLTLSKNQYKLARKRVAAEGLARKVEVLLQDYRDFDEP-FDRIVSVGMFEHVGHENYDTFFKKLYNLLPPGG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  266 TALIHGI------SRQQGGAKNAWINRYIFPGGYIPGVTELVGHMTENDLQVIDLESLRRDYQLTLEHWTKNFHNIEAEI 339
Cdd:pfam02353 160 LMLLHTItglhpdETSERGLPLKFIDKYIFPGGELPSISMIVESSSEAGFTVEDVESLRPHYAKTLDLWAENLQANKDEA 239
                         250       260       270
                  ....*....|....*....|....*....|...
gi 488322222  340 VDEKGERFYRMWDLYLQACAASFQASNIDVIQY 372
Cdd:pfam02353 240 IALQSEEFYRMWMLYLTGCAVAFRIGYIDVHQF 272
 
Name Accession Description Interval E-value
CMAS pfam02353
Mycolic acid cyclopropane synthetase; This family consist of ...
106-372 4.58e-113

Mycolic acid cyclopropane synthetase; This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.


Pssm-ID: 396777 [Multi-domain]  Cd Length: 272  Bit Score: 331.21  E-value: 4.58e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  106 SKKRSQEDIHSHYDLGNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLILTAV 185
Cdd:pfam02353   1 SKTRDAENIQAHYDLSNDFFALFLDPTMTYSCAYFERPDMTLEEAQQAKLDLILDKLGLKPGMTLLDIGCGWGGLMRRAA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  186 KEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKGEsFDHITSVGMFEHVGAENLHEYFDVVQRNLAPKG 265
Cdd:pfam02353  81 ERYDVNVVGLTLSKNQYKLARKRVAAEGLARKVEVLLQDYRDFDEP-FDRIVSVGMFEHVGHENYDTFFKKLYNLLPPGG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  266 TALIHGI------SRQQGGAKNAWINRYIFPGGYIPGVTELVGHMTENDLQVIDLESLRRDYQLTLEHWTKNFHNIEAEI 339
Cdd:pfam02353 160 LMLLHTItglhpdETSERGLPLKFIDKYIFPGGELPSISMIVESSSEAGFTVEDVESLRPHYAKTLDLWAENLQANKDEA 239
                         250       260       270
                  ....*....|....*....|....*....|...
gi 488322222  340 VDEKGERFYRMWDLYLQACAASFQASNIDVIQY 372
Cdd:pfam02353 240 IALQSEEFYRMWMLYLTGCAVAFRIGYIDVHQF 272
cyclopro_CfaB NF040703
C17 cyclopropane fatty acid synthase CfaB;
20-377 1.52e-106

C17 cyclopropane fatty acid synthase CfaB;


Pssm-ID: 468667 [Multi-domain]  Cd Length: 393  Bit Score: 318.86  E-value: 1.52e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  20 QVTYWDGTVKEYGQgsgDPVFKIVFNEKIPVKDLlNNASL-TLGEAYMDRKIEIEGDI-----------QALIYDvynqK 87
Cdd:NF040703  17 RLRLWDGKQLDLGP---SPRVTLVVKDPSLLSQL-THPSLdLLGSAYVEGRLDLEGPImevirvgdelsQALLGD----D 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  88 DSFLHnakfikwlPKESHSKKRSQEDIHSHYDLGNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEG 167
Cdd:NF040703  89 DEAPP--------ERTAHDKATDAAAISYHYDLSNDFYALWLDPDMVYSCAYFETGTEDLAQAQQAKLRHLCRKLRLQPG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 168 DTLLDIGCGWGTLILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKG-ESFDHITSVGMFEHVG 246
Cdd:NF040703 161 ERLLDVGCGWGGLARFAAREFGVEVFGITLSKEQLKLARERVAAEGLQDRVQLELLDYRDLPQdGRFDKVVSVGMFEHVG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 247 AENLHEYFDVVQRNLAPKGTALIHGIS------RQQGGAKNAWINRYIFPGGYIPGVTELVGHMTENDLQVIDLESLRRD 320
Cdd:NF040703 241 HANLPLYCQRLFGAVRPGGLVMNHGITarhtdgRPVGRGAGEFIGRYVFPHGELPHLATITASISEAGLEVVDVESLRLH 320
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 321 YQLTLEHWTKnfhNIEAEIVDEKG---ERFYRMWDLYLQACAASFQASNIDVIQYLLVHP 377
Cdd:NF040703 321 YARTLEHWSA---RLEARLDEAARlvpERALRIWRLYLAGCAYGFARGWINLHQILAVKP 377
PRK11705 PRK11705
cyclopropane fatty acyl phospholipid synthase;
48-374 2.26e-92

cyclopropane fatty acyl phospholipid synthase;


Pssm-ID: 183282  Cd Length: 383  Bit Score: 282.12  E-value: 2.26e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  48 IPVKD------LLNNASLTLGEAYMDrkieieG--DIQALiydvynqkDSFLH-------NAKFIKWLPKESH------- 105
Cdd:PRK11705  39 IQVHNprffkrVLQEGSLGLGESYMD------GwwDCDRL--------DEFFSrvlraglDEKLPHHLKDTLRilrarlf 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 106 ---SKKRSQEDIHSHYDLGNDFYKKWLDQTMTYSCAYFKTpEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLIL 182
Cdd:PRK11705 105 nlqSKKRAWIVGKEHYDLGNDLFEAMLDPRMQYSCGYWKD-ADTLEEAQEAKLDLICRKLQLKPGMRVLDIGCGWGGLAR 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 183 TAVKEYGAKATGITLSEEQFHHIRhiiEK-EGLQdrMTVKLMDYRDLKGeSFDHITSVGMFEHVGAENLHEYFDVVQRNL 261
Cdd:PRK11705 184 YAAEHYGVSVVGVTISAEQQKLAQ---ERcAGLP--VEIRLQDYRDLNG-QFDRIVSVGMFEHVGPKNYRTYFEVVRRCL 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 262 APKGTALIHGI-SRQQGGAKNAWINRYIFPGGYIPGVTELvGHMTENDLQVIDLESLRRDYQLTLEHWTKNFHNIEAEIV 340
Cdd:PRK11705 258 KPDGLFLLHTIgSNKTDTNVDPWINKYIFPNGCLPSVRQI-AQASEGLFVMEDWHNFGADYDRTLMAWHENFEAAWPELA 336
                        330       340       350
                 ....*....|....*....|....*....|....
gi 488322222 341 DEKGERFYRMWDLYLQACAASFQASNIDVIQYLL 374
Cdd:PRK11705 337 DNYSERFYRMWRYYLLSCAGAFRARDIQLWQVVF 370
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
116-271 1.83e-78

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 238.68  E-value: 1.83e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 116 SHYDLGNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLILTAVKEYGAKATGI 195
Cdd:COG2230    1 HHYDLGNDFYRLFLDPTMTYSCAYFEDPDDTLEEAQEAKLDLILRKLGLKPGMRVLDIGCGWGGLALYLARRYGVRVTGV 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 488322222 196 TLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKG-ESFDHITSVGMFEHVGAENLHEYFDVVQRNLAPKGTALIHG 271
Cdd:COG2230   81 TLSPEQLEYARERAAEAGLADRVEVRLADYRDLPAdGQFDAIVSIGMFEHVGPENYPAYFAKVARLLKPGGRLLLHT 157
mycolic_MTase NF040660
cyclopropane mycolic acid synthase family methyltransferase; Members of this family include ...
112-375 7.80e-60

cyclopropane mycolic acid synthase family methyltransferase; Members of this family include tailoring enzymes that make site-specific modifications to mycolic acid precursor molecules. These include Mycobacterium tuberculosis enzymes MmaA1-MmaA4, CmaA1-CmaA2, and PcaA. The family also includes UmaA, reported to be the lone member of this family not involved in mycolic acid biosynthesis. No members of this family are found in species that lack mycolic acids. This model excludes two more distantly related paralogs, Rv0447c (UfaA1 ) and Rv3720, that are also encoded in the Mycobacterium tuberculosis H37Rv genome.


Pssm-ID: 468626  Cd Length: 283  Bit Score: 195.37  E-value: 7.80e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 112 EDIHSHYDLGNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLILTAVKEYGAK 191
Cdd:NF040660   6 EDVQAHYDLSDDFFALFLDPTQTYSCAYFERDDMTLEEAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAVEKYDVN 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 192 ATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKgESFDHITSVGMFEHVGAENLHEYFDVVQRNLAPKGTALIHG 271
Cdd:NF040660  86 VVGLTLSKNQAAHVQQVLDEIDTPRSRRVLLQGWEEFD-EPVDRIVSIGAFEHFGHERYDDFFKRAYNILPADGRMLLHT 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 272 IS-------RQQGGAKNAWINRY-------IFPGGYIPGVTELVGHMTENDLQVIDLESLRRDYQLTLEHWTKNFHNIEA 337
Cdd:NF040660 165 ITglhrkemHERGLPLTMELARFikfivteIFPGGRLPSIEMVVEHAEKAGFTVTRVQSLQPHYARTLDLWADALQAHKD 244
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 488322222 338 EIVDEKGERFYRMWDLYLQACAASFQASNIDVIQYLLV 375
Cdd:NF040660 245 EAIAIQSEEVYERYMKYLTGCAKLFRDGYIDVNQFTLA 282
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
169-270 3.73e-11

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 59.37  E-value: 3.73e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 169 TLLDIGCGWGTLILTAVKEYGAKATGITLSEEQFHHIRhIIEKEGLQDRMTVKLMDYRDL---KGESFDHITSVGMFEHV 245
Cdd:cd02440    1 RVLDLGCGTGALALALASGPGARVTGVDISPVALELAR-KAAAALLADNVEVLKGDAEELppeADESFDVIISDPPLHHL 79
                         90       100
                 ....*....|....*....|....*
gi 488322222 246 gAENLHEYFDVVQRNLAPKGTALIH 270
Cdd:cd02440   80 -VEDLARFLEEARRLLKPGGVLVLT 103
PKS_MT smart00828
Methyltransferase in polyketide synthase (PKS) enzymes;
171-233 3.06e-04

Methyltransferase in polyketide synthase (PKS) enzymes;


Pssm-ID: 214839 [Multi-domain]  Cd Length: 224  Bit Score: 41.63  E-value: 3.06e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488322222   171 LDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKlmdYRDLKGESF 233
Cdd:smart00828   4 LDFGCGYGSdLIDLAERHPHLQLHGYTISPEQAEVGRERIRALGLQGRIRIF---YRDSAKDPF 64
 
Name Accession Description Interval E-value
CMAS pfam02353
Mycolic acid cyclopropane synthetase; This family consist of ...
106-372 4.58e-113

Mycolic acid cyclopropane synthetase; This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.


Pssm-ID: 396777 [Multi-domain]  Cd Length: 272  Bit Score: 331.21  E-value: 4.58e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  106 SKKRSQEDIHSHYDLGNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLILTAV 185
Cdd:pfam02353   1 SKTRDAENIQAHYDLSNDFFALFLDPTMTYSCAYFERPDMTLEEAQQAKLDLILDKLGLKPGMTLLDIGCGWGGLMRRAA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  186 KEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKGEsFDHITSVGMFEHVGAENLHEYFDVVQRNLAPKG 265
Cdd:pfam02353  81 ERYDVNVVGLTLSKNQYKLARKRVAAEGLARKVEVLLQDYRDFDEP-FDRIVSVGMFEHVGHENYDTFFKKLYNLLPPGG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  266 TALIHGI------SRQQGGAKNAWINRYIFPGGYIPGVTELVGHMTENDLQVIDLESLRRDYQLTLEHWTKNFHNIEAEI 339
Cdd:pfam02353 160 LMLLHTItglhpdETSERGLPLKFIDKYIFPGGELPSISMIVESSSEAGFTVEDVESLRPHYAKTLDLWAENLQANKDEA 239
                         250       260       270
                  ....*....|....*....|....*....|...
gi 488322222  340 VDEKGERFYRMWDLYLQACAASFQASNIDVIQY 372
Cdd:pfam02353 240 IALQSEEFYRMWMLYLTGCAVAFRIGYIDVHQF 272
cyclopro_CfaB NF040703
C17 cyclopropane fatty acid synthase CfaB;
20-377 1.52e-106

C17 cyclopropane fatty acid synthase CfaB;


Pssm-ID: 468667 [Multi-domain]  Cd Length: 393  Bit Score: 318.86  E-value: 1.52e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  20 QVTYWDGTVKEYGQgsgDPVFKIVFNEKIPVKDLlNNASL-TLGEAYMDRKIEIEGDI-----------QALIYDvynqK 87
Cdd:NF040703  17 RLRLWDGKQLDLGP---SPRVTLVVKDPSLLSQL-THPSLdLLGSAYVEGRLDLEGPImevirvgdelsQALLGD----D 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  88 DSFLHnakfikwlPKESHSKKRSQEDIHSHYDLGNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEG 167
Cdd:NF040703  89 DEAPP--------ERTAHDKATDAAAISYHYDLSNDFYALWLDPDMVYSCAYFETGTEDLAQAQQAKLRHLCRKLRLQPG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 168 DTLLDIGCGWGTLILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKG-ESFDHITSVGMFEHVG 246
Cdd:NF040703 161 ERLLDVGCGWGGLARFAAREFGVEVFGITLSKEQLKLARERVAAEGLQDRVQLELLDYRDLPQdGRFDKVVSVGMFEHVG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 247 AENLHEYFDVVQRNLAPKGTALIHGIS------RQQGGAKNAWINRYIFPGGYIPGVTELVGHMTENDLQVIDLESLRRD 320
Cdd:NF040703 241 HANLPLYCQRLFGAVRPGGLVMNHGITarhtdgRPVGRGAGEFIGRYVFPHGELPHLATITASISEAGLEVVDVESLRLH 320
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 321 YQLTLEHWTKnfhNIEAEIVDEKG---ERFYRMWDLYLQACAASFQASNIDVIQYLLVHP 377
Cdd:NF040703 321 YARTLEHWSA---RLEARLDEAARlvpERALRIWRLYLAGCAYGFARGWINLHQILAVKP 377
PRK11705 PRK11705
cyclopropane fatty acyl phospholipid synthase;
48-374 2.26e-92

cyclopropane fatty acyl phospholipid synthase;


Pssm-ID: 183282  Cd Length: 383  Bit Score: 282.12  E-value: 2.26e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  48 IPVKD------LLNNASLTLGEAYMDrkieieG--DIQALiydvynqkDSFLH-------NAKFIKWLPKESH------- 105
Cdd:PRK11705  39 IQVHNprffkrVLQEGSLGLGESYMD------GwwDCDRL--------DEFFSrvlraglDEKLPHHLKDTLRilrarlf 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 106 ---SKKRSQEDIHSHYDLGNDFYKKWLDQTMTYSCAYFKTpEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLIL 182
Cdd:PRK11705 105 nlqSKKRAWIVGKEHYDLGNDLFEAMLDPRMQYSCGYWKD-ADTLEEAQEAKLDLICRKLQLKPGMRVLDIGCGWGGLAR 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 183 TAVKEYGAKATGITLSEEQFHHIRhiiEK-EGLQdrMTVKLMDYRDLKGeSFDHITSVGMFEHVGAENLHEYFDVVQRNL 261
Cdd:PRK11705 184 YAAEHYGVSVVGVTISAEQQKLAQ---ERcAGLP--VEIRLQDYRDLNG-QFDRIVSVGMFEHVGPKNYRTYFEVVRRCL 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 262 APKGTALIHGI-SRQQGGAKNAWINRYIFPGGYIPGVTELvGHMTENDLQVIDLESLRRDYQLTLEHWTKNFHNIEAEIV 340
Cdd:PRK11705 258 KPDGLFLLHTIgSNKTDTNVDPWINKYIFPNGCLPSVRQI-AQASEGLFVMEDWHNFGADYDRTLMAWHENFEAAWPELA 336
                        330       340       350
                 ....*....|....*....|....*....|....
gi 488322222 341 DEKGERFYRMWDLYLQACAASFQASNIDVIQYLL 374
Cdd:PRK11705 337 DNYSERFYRMWRYYLLSCAGAFRARDIQLWQVVF 370
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
116-271 1.83e-78

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 238.68  E-value: 1.83e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 116 SHYDLGNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLILTAVKEYGAKATGI 195
Cdd:COG2230    1 HHYDLGNDFYRLFLDPTMTYSCAYFEDPDDTLEEAQEAKLDLILRKLGLKPGMRVLDIGCGWGGLALYLARRYGVRVTGV 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 488322222 196 TLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKG-ESFDHITSVGMFEHVGAENLHEYFDVVQRNLAPKGTALIHG 271
Cdd:COG2230   81 TLSPEQLEYARERAAEAGLADRVEVRLADYRDLPAdGQFDAIVSIGMFEHVGPENYPAYFAKVARLLKPGGRLLLHT 157
mycolic_MTase NF040660
cyclopropane mycolic acid synthase family methyltransferase; Members of this family include ...
112-375 7.80e-60

cyclopropane mycolic acid synthase family methyltransferase; Members of this family include tailoring enzymes that make site-specific modifications to mycolic acid precursor molecules. These include Mycobacterium tuberculosis enzymes MmaA1-MmaA4, CmaA1-CmaA2, and PcaA. The family also includes UmaA, reported to be the lone member of this family not involved in mycolic acid biosynthesis. No members of this family are found in species that lack mycolic acids. This model excludes two more distantly related paralogs, Rv0447c (UfaA1 ) and Rv3720, that are also encoded in the Mycobacterium tuberculosis H37Rv genome.


Pssm-ID: 468626  Cd Length: 283  Bit Score: 195.37  E-value: 7.80e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 112 EDIHSHYDLGNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLILTAVKEYGAK 191
Cdd:NF040660   6 EDVQAHYDLSDDFFALFLDPTQTYSCAYFERDDMTLEEAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAVEKYDVN 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 192 ATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKgESFDHITSVGMFEHVGAENLHEYFDVVQRNLAPKGTALIHG 271
Cdd:NF040660  86 VVGLTLSKNQAAHVQQVLDEIDTPRSRRVLLQGWEEFD-EPVDRIVSIGAFEHFGHERYDDFFKRAYNILPADGRMLLHT 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 272 IS-------RQQGGAKNAWINRY-------IFPGGYIPGVTELVGHMTENDLQVIDLESLRRDYQLTLEHWTKNFHNIEA 337
Cdd:NF040660 165 ITglhrkemHERGLPLTMELARFikfivteIFPGGRLPSIEMVVEHAEKAGFTVTRVQSLQPHYARTLDLWADALQAHKD 244
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 488322222 338 EIVDEKGERFYRMWDLYLQACAASFQASNIDVIQYLLV 375
Cdd:NF040660 245 EAIAIQSEEVYERYMKYLTGCAKLFRDGYIDVNQFTLA 282
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
171-265 5.16e-19

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 81.07  E-value: 5.16e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  171 LDIGCGWGTLILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLqdRMTVKLMDYRDL--KGESFDHITSVGMFEHVGAE 248
Cdd:pfam13649   2 LDLGCGTGRLTLALARRGGARVTGVDLSPEMLERARERAAEAGL--NVEFVQGDAEDLpfPDGSFDLVVSSGVLHHLPDP 79
                          90
                  ....*....|....*..
gi 488322222  249 NLHEYFDVVQRNLAPKG 265
Cdd:pfam13649  80 DLEAALREIARVLKPGG 96
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
156-274 1.51e-15

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 73.10  E-value: 1.51e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 156 HHILDKLFIKEGDTLLDIGCGWGTLILtAVKEYGAKATGITLSEEQFHHIRHIIEKEGLqdRMTVKLMDYRDL--KGESF 233
Cdd:COG2226   12 EALLAALGLRPGARVLDLGCGTGRLAL-ALAERGARVTGVDISPEMLELARERAAEAGL--NVEFVVGDAEDLpfPDGSF 88
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 488322222 234 DHITSVGMFEHVgaENLHEYFDVVQRNLAPKGTALIHGISR 274
Cdd:COG2226   89 DLVISSFVLHHL--PDPERALAEIARVLKPGGRLVVVDFSP 127
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
154-269 2.40e-14

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 69.28  E-value: 2.40e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 154 KVHHILDKLfIKEGDTLLDIGCGWGTLiLTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLqdrmTVKLMDYRDL--KGE 231
Cdd:COG2227   13 RLAALLARL-LPAGGRVLDVGCGTGRL-ALALARRGADVTGVDISPEALEIARERAAELNV----DFVQGDLEDLplEDG 86
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 488322222 232 SFDHITSVGMFEHVgaENLHEYFDVVQRNLAPKGTALI 269
Cdd:COG2227   87 SFDLVICSEVLEHL--PDPAALLRELARLLKPGGLLLL 122
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
165-276 3.83e-14

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 70.72  E-value: 3.83e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 165 KEGDTLLDIGCGWGTLILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLqDRMTVKLMDYRDLKG---ESFDHITSVGM 241
Cdd:COG0500   25 PKGGRVLDLGCGTGRNLLALAARFGGRVIGIDLSPEAIALARARAAKAGL-GNVEFLVADLAELDPlpaESFDLVVAFGV 103
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 488322222 242 FEHVGAENLHEYFDVVQRNLAPKGTALIHGISRQQ 276
Cdd:COG0500  104 LHHLPPEEREALLRELARALKPGGVLLLSASDAAA 138
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
169-270 3.73e-11

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 59.37  E-value: 3.73e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 169 TLLDIGCGWGTLILTAVKEYGAKATGITLSEEQFHHIRhIIEKEGLQDRMTVKLMDYRDL---KGESFDHITSVGMFEHV 245
Cdd:cd02440    1 RVLDLGCGTGALALALASGPGARVTGVDISPVALELAR-KAAAALLADNVEVLKGDAEELppeADESFDVIISDPPLHHL 79
                         90       100
                 ....*....|....*....|....*
gi 488322222 246 gAENLHEYFDVVQRNLAPKGTALIH 270
Cdd:cd02440   80 -VEDLARFLEEARRLLKPGGVLVLT 103
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
171-269 7.39e-10

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 55.36  E-value: 7.39e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  171 LDIGCGWGtLILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLQDRmtvkLMDYRDL--KGESFDHITSVGMFEHVgaE 248
Cdd:pfam08241   1 LDVGCGTG-LLTELLARLGARVTGVDISPEMLELAREKAPREGLTFV----VGDAEDLpfPDNSFDLVLSSEVLHHV--E 73
                          90       100
                  ....*....|....*....|.
gi 488322222  249 NLHEYFDVVQRNLAPKGTALI 269
Cdd:pfam08241  74 DPERALREIARVLKPGGILII 94
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
149-265 1.10e-09

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 57.32  E-value: 1.10e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 149 QAQVNKVHHILDKLFIKEGDTLLDIGCGWGtLILTAVKEYGAKATGITLSEEQfhhIRHIIEKeGLQDRMTVklMDYRDL 228
Cdd:COG4976   29 EAPALLAEELLARLPPGPFGRVLDLGCGTG-LLGEALRPRGYRLTGVDLSEEM---LAKAREK-GVYDRLLV--ADLADL 101
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 488322222 229 K--GESFDHITSVGMFEHVGaeNLHEYFDVVQRNLAPKG 265
Cdd:COG4976  102 AepDGRFDLIVAADVLTYLG--DLAAVFAGVARALKPGG 138
Methyltransf_12 pfam08242
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
171-265 4.90e-09

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 400515 [Multi-domain]  Cd Length: 98  Bit Score: 53.14  E-value: 4.90e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  171 LDIGCGWGTLILTAVKEY-GAKATGITLSEEQFHHIRHIIEKEGLQD--RMTVKLMDYRDLKGESFDHITSVGMFEHVga 247
Cdd:pfam08242   1 LEIGCGTGTLLRALLEALpGLEYTGLDISPAALEAARERLAALGLLNavRVELFQLDLGELDPGSFDVVVASNVLHHL-- 78
                          90
                  ....*....|....*...
gi 488322222  248 ENLHEYFDVVQRNLAPKG 265
Cdd:pfam08242  79 ADPRAVLRNIRRLLKPGG 96
TrmN6 COG4123
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ...
164-270 1.64e-08

tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443299 [Multi-domain]  Cd Length: 238  Bit Score: 54.77  E-value: 1.64e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 164 IKEGDTLLDIGCGWGTL-ILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRD----LKGESFDHITS 238
Cdd:COG4123   35 VKKGGRVLDLGTGTGVIaLMLAQRSPGARITGVEIQPEAAELARRNVALNGLEDRITVIHGDLKEfaaeLPPGSFDLVVS 114
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 488322222 239 ------VGMFE-----------HVGAENLHEYFDVVQRNLAPKGT-ALIH 270
Cdd:COG4123  115 nppyfkAGSGRkspdearaiarHEDALTLEDLIRAAARLLKPGGRfALIH 164
Methyltransf_23 pfam13489
Methyltransferase domain; This family appears to be a methyltransferase domain.
157-270 1.48e-07

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 404385 [Multi-domain]  Cd Length: 162  Bit Score: 50.50  E-value: 1.48e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  157 HILDKLF--IKEGDTLLDIGCGWGTLiLTAVKEYGAKATGITLSEEQfhhirhiIEKEGLQDRMTVKLMDYRDLKGESFD 234
Cdd:pfam13489  11 DLLLRLLpkLPSPGRVLDFGCGTGIF-LRLLRAQGFSVTGVDPSPIA-------IERALLNVRFDQFDEQEAAVPAGKFD 82
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 488322222  235 HITSVGMFEHVgaENLHEYFDVVQRNLAPKGTALIH 270
Cdd:pfam13489  83 VIVAREVLEHV--PDPPALLRQIAALLKPGGLLLLS 116
Tam COG4106
Trans-aconitate methyltransferase [Energy production and conversion];
166-269 4.01e-07

Trans-aconitate methyltransferase [Energy production and conversion];


Pssm-ID: 443282 [Multi-domain]  Cd Length: 100  Bit Score: 47.90  E-value: 4.01e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 166 EGDTLLDIGCGWGTLILTAVKEY-GAKATGITLSEEQFHHIRHiiekegLQDRMTVKLMDYRDLK-GESFDHITSVGMFE 243
Cdd:COG4106    1 PPRRVLDLGCGTGRLTALLAERFpGARVTGVDLSPEMLARARA------RLPNVRFVVADLRDLDpPEPFDLVVSNAALH 74
                         90       100
                 ....*....|....*....|....*.
gi 488322222 244 HVgaENLHEYFDVVQRNLAPKGTALI 269
Cdd:COG4106   75 WL--PDHAALLARLAAALAPGGVLAV 98
PLN02244 PLN02244
tocopherol O-methyltransferase
165-269 4.21e-06

tocopherol O-methyltransferase


Pssm-ID: 215135 [Multi-domain]  Cd Length: 340  Bit Score: 48.20  E-value: 4.21e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 165 KEGDTLLDIGCGWGTLILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKGE--SFDHITSVGMF 242
Cdd:PLN02244 117 KRPKRIVDVGCGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEdgQFDLVWSMESG 196
                         90       100
                 ....*....|....*....|....*..
gi 488322222 243 EHVgaENLHEYFDVVQRNLAPKGTALI 269
Cdd:PLN02244 197 EHM--PDKRKFVQELARVAAPGGRIII 221
PKS_MT smart00828
Methyltransferase in polyketide synthase (PKS) enzymes;
171-233 3.06e-04

Methyltransferase in polyketide synthase (PKS) enzymes;


Pssm-ID: 214839 [Multi-domain]  Cd Length: 224  Bit Score: 41.63  E-value: 3.06e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488322222   171 LDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKlmdYRDLKGESF 233
Cdd:smart00828   4 LDFGCGYGSdLIDLAERHPHLQLHGYTISPEQAEVGRERIRALGLQGRIRIF---YRDSAKDPF 64
Methyltransf_31 pfam13847
Methyltransferase domain; This family appears to have methyltransferase activity.
164-269 5.41e-04

Methyltransferase domain; This family appears to have methyltransferase activity.


Pssm-ID: 463998 [Multi-domain]  Cd Length: 150  Bit Score: 40.09  E-value: 5.41e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  164 IKEGDTLLDIGCGWGTLILTAVKEYG--AKATGITLSEEQFHHIRHIIEKEGLqDRMTVKLMDYRDL----KGESFDHIT 237
Cdd:pfam13847   1 IDKGMRVLDLGCGTGHLSFELAEELGpnAEVVGIDISEEAIEKARENAQKLGF-DNVEFEQGDIEELpellEDDKFDVVI 79
                          90       100       110
                  ....*....|....*....|....*....|..
gi 488322222  238 SVGMFEHVGaeNLHEYFDVVQRNLAPKGTALI 269
Cdd:pfam13847  80 SNCVLNHIP--DPDKVLQEILRVLKPGGRLII 109
PRK08317 PRK08317
hypothetical protein; Provisional
156-269 9.78e-04

hypothetical protein; Provisional


Pssm-ID: 181382 [Multi-domain]  Cd Length: 241  Bit Score: 40.31  E-value: 9.78e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 156 HHILDKLFIKEGDTLLDIGCGWGTLILTAVKEYGA--KATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKGESF 233
Cdd:PRK08317   9 ARTFELLAVQPGDRVLDVGCGPGNDARELARRVGPegRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSF 88
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 488322222 234 DHITSVGMFEHVgaEN----LHEyfdvVQRNLAPKGTALI 269
Cdd:PRK08317  89 DAVRSDRVLQHL--EDparaLAE----IARVLRPGGRVVV 122
RsmC COG2813
16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA ...
159-269 2.33e-03

16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA G1207 methylase RsmC is part of the Pathway/BioSystem: 16S rRNA modification


Pssm-ID: 442062 [Multi-domain]  Cd Length: 191  Bit Score: 38.63  E-value: 2.33e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 159 LDKLFIKEGDTLLDIGCGWGTLILTAVKEYGAKAtgITLSEEQFHHI---RHIIEKEGLQDrMTVKLMD-YRDLKGESFD 234
Cdd:COG2813   42 LEHLPEPLGGRVLDLGCGYGVIGLALAKRNPEAR--VTLVDVNARAVelaRANAAANGLEN-VEVLWSDgLSGVPDGSFD 118
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 488322222 235 HITS-----VGMFEHVGAenLHEYFDVVQRNLAPKGTALI 269
Cdd:COG2813  119 LILSnppfhAGRAVDKEV--AHALIADAARHLRPGGELWL 156
PrmA pfam06325
Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal ...
163-276 2.40e-03

Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.


Pssm-ID: 428888 [Multi-domain]  Cd Length: 294  Bit Score: 39.56  E-value: 2.40e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222  163 FIKEGDTLLDIGCGWGTLILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDyrDLKGESFDhitsvGMF 242
Cdd:pfam06325 158 LVKPGESVLDVGCGSGILAIAALKLGAKKVVGVDIDPVAVRAAKENAELNGVEARLEVYLPG--DLPKEKAD-----VVV 230
                          90       100       110
                  ....*....|....*....|....*....|....
gi 488322222  243 EHVGAENLHEYFDVVQRNLAPKGTALIHGISRQQ 276
Cdd:pfam06325 231 ANILADPLIELAPDIYALVKPGGYLILSGILKEQ 264
cbiT PRK00377
cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
159-220 6.25e-03

cobalt-precorrin-6Y C(15)-methyltransferase; Provisional


Pssm-ID: 234740  Cd Length: 198  Bit Score: 37.47  E-value: 6.25e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488322222 159 LDKLFIKEGDTLLDIGCGWGTLILTA---VKEyGAKATGITLSEEQFHHIRHIIEKEGLQDRMTV 220
Cdd:PRK00377  33 LSKLRLRKGDMILDIGCGTGSVTVEAsllVGE-TGKVYAVDKDEKAINLTRRNAEKFGVLNNIVL 96
PTZ00098 PTZ00098
phosphoethanolamine N-methyltransferase; Provisional
144-269 7.74e-03

phosphoethanolamine N-methyltransferase; Provisional


Pssm-ID: 173391 [Multi-domain]  Cd Length: 263  Bit Score: 37.64  E-value: 7.74e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488322222 144 EDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTLILTAVKEYGAKATGITLSEEQFHhirhiIEKEGLQDRMTVKL- 222
Cdd:PTZ00098  30 EDYISSGGIEATTKILSDIELNENSKVLDIGSGLGGGCKYINEKYGAHVHGVDICEKMVN-----IAKLRNSDKNKIEFe 104
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 488322222 223 -MDY--RDLKGESFDHITSVGMFEHVGAENLHEYFDVVQRNLAPKGTALI 269
Cdd:PTZ00098 105 aNDIlkKDFPENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLI 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH