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MULTISPECIES: BCCT family transporter [Staphylococcus]
Protein Classification
BCCT family transporter ( domain architecture ID 10003438 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Bacillus subtilis glycine betaine transporter OpuD
List of domain hits
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-504
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 632.57
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 1 M NSSSH EK KN KK FS - S VFI Y S SIIVAIV V II G AIW PE KFDYIT N N A KM WIT DKL GW Y YL I L TTII V F FC IF L I FS PI GK L 79
Cdd:COG1292 1 M SDKNK EK FK KK ID p P VFI P S ALLILAF V LW G LLF PE AAGAVL N A A FS WIT TNF GW F YL L L VLLF V V FC LY L A FS KY GK I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 80 K LG KPND KPEF N T I SWFAMLFSAGMGIGLVF Y G A AEP MAD F AA PP - TAD P KTTA A YTE A LRS TFFHWG F HAWAIY GV V A L 158
Cdd:COG1292 81 R LG GDDA KPEF S T F SWFAMLFSAGMGIGLVF W G V AEP LYH F LS PP p GVE P GSPE A ARW A MAY TFFHWG L HAWAIY AL V G L 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 159 ALAY AQF R K G E P GL IS RT L R P I LG NKVE GPIG TL ID V L S VFAT LV GVA V SLG M GALQIN G GLNYLF NV PN NTL VQ G III V 238
Cdd:COG1292 161 ALAY FAY R R G L P LT IS SA L Y P L LG DRIY GPIG KV ID I L A VFAT VF GVA T SLG L GALQIN A GLNYLF GI PN SLT VQ I III A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 239 IV T I LF IA SA W SGL S KGI QY LSNLN IS L GAI L MIIT LI I GPT VL ILN MMTS S T G SL L NT F LFN SL D T A A LNG qk RD W MST 318
Cdd:COG1292 241 VI T A LF TI SA V SGL D KGI KR LSNLN MV L ALL L LLFV LI V GPT LF ILN LFVQ S L G DY L QN F VPM SL W T D A YGD -- TG W LGG 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 319 WT LY YW G WW LS W S PFVG V FIAR V S K GR S IREF IS GVLLVP A L VS F V WFSVFG VLG I ETGKKHP ---- E LFKMSP E TQ LF G 394
Cdd:COG1292 319 WT VF YW A WW IA W A PFVG L FIAR I S R GR T IREF VL GVLLVP T L FT F L WFSVFG GTA I HLELNGG gdla E AVAAGV E AA LF A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 395 VFHHI P M G IV LS II A LL L IAS FF I TSADS ATF VL G M Q T TF G SLN P SIMVKVT WGV AQA L I A F VLLLAGG gdgska L N A I Q 474
Cdd:COG1292 399 LLEQL P L G TI LS VL A II L VII FF V TSADS GSL VL A M L T SG G DEE P PRWQRIF WGV LIG L V A A VLLLAGG ------ L S A L Q 472
490 500 510
....*....|....*....|....*....|
gi 488383788 475 S A A II S A F PFSFV VIM M MI S FY K DANQERK 504
Cdd:COG1292 473 T A S II T A L PFSFV LLL M CV S LV K ALREDPR 502
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-504
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 632.57
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 1 M NSSSH EK KN KK FS - S VFI Y S SIIVAIV V II G AIW PE KFDYIT N N A KM WIT DKL GW Y YL I L TTII V F FC IF L I FS PI GK L 79
Cdd:COG1292 1 M SDKNK EK FK KK ID p P VFI P S ALLILAF V LW G LLF PE AAGAVL N A A FS WIT TNF GW F YL L L VLLF V V FC LY L A FS KY GK I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 80 K LG KPND KPEF N T I SWFAMLFSAGMGIGLVF Y G A AEP MAD F AA PP - TAD P KTTA A YTE A LRS TFFHWG F HAWAIY GV V A L 158
Cdd:COG1292 81 R LG GDDA KPEF S T F SWFAMLFSAGMGIGLVF W G V AEP LYH F LS PP p GVE P GSPE A ARW A MAY TFFHWG L HAWAIY AL V G L 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 159 ALAY AQF R K G E P GL IS RT L R P I LG NKVE GPIG TL ID V L S VFAT LV GVA V SLG M GALQIN G GLNYLF NV PN NTL VQ G III V 238
Cdd:COG1292 161 ALAY FAY R R G L P LT IS SA L Y P L LG DRIY GPIG KV ID I L A VFAT VF GVA T SLG L GALQIN A GLNYLF GI PN SLT VQ I III A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 239 IV T I LF IA SA W SGL S KGI QY LSNLN IS L GAI L MIIT LI I GPT VL ILN MMTS S T G SL L NT F LFN SL D T A A LNG qk RD W MST 318
Cdd:COG1292 241 VI T A LF TI SA V SGL D KGI KR LSNLN MV L ALL L LLFV LI V GPT LF ILN LFVQ S L G DY L QN F VPM SL W T D A YGD -- TG W LGG 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 319 WT LY YW G WW LS W S PFVG V FIAR V S K GR S IREF IS GVLLVP A L VS F V WFSVFG VLG I ETGKKHP ---- E LFKMSP E TQ LF G 394
Cdd:COG1292 319 WT VF YW A WW IA W A PFVG L FIAR I S R GR T IREF VL GVLLVP T L FT F L WFSVFG GTA I HLELNGG gdla E AVAAGV E AA LF A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 395 VFHHI P M G IV LS II A LL L IAS FF I TSADS ATF VL G M Q T TF G SLN P SIMVKVT WGV AQA L I A F VLLLAGG gdgska L N A I Q 474
Cdd:COG1292 399 LLEQL P L G TI LS VL A II L VII FF V TSADS GSL VL A M L T SG G DEE P PRWQRIF WGV LIG L V A A VLLLAGG ------ L S A L Q 472
490 500 510
....*....|....*....|....*....|
gi 488383788 475 S A A II S A F PFSFV VIM M MI S FY K DANQERK 504
Cdd:COG1292 473 T A S II T A L PFSFV LLL M CV S LV K ALREDPR 502
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
16-502
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 599.52
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 16 VF IY S SIIVAIV V II G A I W PE KFDYIT N N A KM WITD KL GW Y YL I L TT I IVF F CI FL I FS PI G KLK LG KPN DKPEF N T I SW 95
Cdd:pfam02028 1 VF AV S AGLILAF V LL G L I F PE ALSAVV N T A LD WITD NF GW F YL L L VL I FLV F AL FL A FS RY G NIR LG GDD DKPEF S T F SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 96 FAMLF S AGMGIGLVF Y G A AEP MADFAA - PP TAD P K T TA A YTE A LRS TFFHWG F HAWAIY GV VALALAY AQF RKG E P G LIS 174
Cdd:pfam02028 81 FAMLF A AGMGIGLVF W G V AEP LSHYLS p PP GGE P G T PE A AQQ A MAY TFFHWG L HAWAIY AL VALALAY FAY RKG L P L LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 175 RT L R P I LG NKVE GPIG TL ID V L SVF AT LV GVA V SLG M GALQIN G GL N YLF NV PN NTLV Q GI II V I V T I LF IA SA W SGL S K 254
Cdd:pfam02028 161 SA L Y P L LG DRID GPIG KA ID I L AII AT VF GVA T SLG L GALQIN A GL S YLF GI PN TLTT Q LA II A I I T A LF TI SA V SGL D K 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 255 GI QY LSNLN IS L GAI L MIIT LI I GPT VL ILN MMTS S T G SL L NT F LFN S LD T AAL n G QKRD W MST WT LY YW G WW LS W S PFV 334
Cdd:pfam02028 241 GI KR LSNLN MY L AVA L LLFV LI A GPT LF ILN TFVQ S L G DY L QN F VPM S FY T DPF - G DTGG W LGG WT IF YW A WW IA W A PFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 335 G V FIAR V S K GR S IREFI S GVLLVP A L VS F V WFSVFG VLG I ETGKKH P ---- ELFKMS P ETQ LF GVFHHI P M G IV LS II AL 410
Cdd:pfam02028 320 G M FIAR I S R GR T IREFI L GVLLVP T L FT F L WFSVFG GTA I YLELNG P gdla DAVEAG P PAA LF ALLEQL P L G TI LS VL AL 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 411 LLI AS FF I TSADS A T F V LG M QTTF G S LNP SIMVK V T WGV AQALI A F VLLLAGG gdgska L N A I QSA A II S A F PFSF VVIM 490
Cdd:pfam02028 400 LLI II FF V TSADS G T L V IA M LSSG G D LNP PRWQR V F WGV LLGAV A A VLLLAGG ------ L E A L QSA S II A A L PFSF ILLL 473
490
....*....|..
gi 488383788 491 M M IS FY K DANQ E 502
Cdd:pfam02028 474 M C IS LF K ALRE E 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
54-502
5.38e-161
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 466.06
E-value: 5.38e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 54 GW Y Y LILT T IIVF F CIFLI FS PI GK LK LG KPND KPEF N T I SW F AMLF S AGMG I GL V F Y G A AEP MADFAA PP T - A D P KT T A 132
Cdd:TIGR00842 1 GW A Y ILTV T LFLG F VLYIA FS RY GK IR LG RDDE KPEF S T L SW L AMLF A AGMG A GL M F W G V AEP LTYYLT PP F g A G P TS T T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 133 A YTE AL RS T F FHWG F H A WAIY GV V A LALAY AQ FRKG E P GLI S RT L R P I LG N KV E GPIG TL ID V L SVF AT LV GVA V SLG M G 212
Cdd:TIGR00842 81 A QEQ AL AY T L FHWG I H P WAIY AL V G LALAY FH FRKG L P LRL S SA L V P L LG E KV N GPIG KA ID I L ALV AT VF GVA T SLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 213 A L QIN G GL NY LF NV P NNTLV Q GI II VI VT I L FIA S AW SG LS KGI QY LSN L N IS L GAI L MIIT LI I GPTV LI LN MMTS S T G 292
Cdd:TIGR00842 161 A P QIN A GL SA LF GI P DSFWL Q AL II LC VT A L ACI S VA SG VG KGI KI LSN I N MA L AFL L LLFV LI V GPTV FL LN SFVD S I G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 293 SL L NT F LFN S LD T AALN G q K RD W MST WT LY YW G WW L SWSPFVG V FIAR V S K GR S IREFI S GVLL V P ALVSFV WFSVFG VL 372
Cdd:TIGR00842 241 NY L QN F PQM S FR T DPDD G - K GG W PGG WT VF YW A WW I SWSPFVG M FIAR I S R GR T IREFI F GVLL G P TAFTWL WFSVFG NS 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 373 GIETGKKH ----- P ELFKMSPETQ LFG VFHHI P M G IVLSII AL L LI AS FFITSADSA TF VL G - MQTTF G S L N -- P SIM V K 444
Cdd:TIGR00842 320 ALLLQQNG gfing P FVVETNGARA LFG LLAAL P L G TITMAL AL I LI II FFITSADSA SL VL A n TTSRG G Q L G ee P PKW V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 488383788 445 V T W G VA QA LIA F VLL LA GG gdgsk A L N A I Q SAA II S A F PFSFV VIMM M I S FY KD AN Q E 502
Cdd:TIGR00842 400 V F W A VA IG LIA L VLL FS GG ----- S L A A L Q TTT II A A L PFSFV MLVV M F S LI KD LK Q D 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
1-497
1.03e-124
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 380.97
E-value: 1.03e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 1 MNS S SHEK K NKKFSS VF IY S SIIVAIVVIIGAIWPEKFDYIT N NAKM W ITDKL GWYYL ILT T IIVF F C IF LIF S PI G KL K 80
Cdd:PRK09928 4 TDL S HKRE K DRINPV VF YT S AGLILLFSLTTILFTDFSNRWI N RTLN W VSKTF GWYYL LAA T LYIV F V IF IAC S RF G SI K 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 81 LG KPND KPEF NTI SW F AMLF S AG M GI G L V F YGA AEP MADFAA PP TADPK T TA A YTE A LRS T F FH W G FHA W AI Y GVVAL AL 160
Cdd:PRK09928 84 LG PEQS KPEF SLL SW A AMLF A AG I GI D L M F FSV AEP VTQYMQ PP EGAGQ T IE A ARQ A MVW T L FH Y G LTG W SM Y ALMGM AL 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 161 A Y AQF R KGE P GL I SRT L R PI L G NKVE GPIG TLI D VLS V FA T LV G V A VS LG M G AL Q I N G GL NY LF NV P NNTLV Q GII I VIV 240
Cdd:PRK09928 164 G Y FSY R YNL P LT I RSA L Y PI F G KRIN GPIG HSV D IAA V IG T IF G I A TT LG I G VV Q L N Y GL SV LF DI P ESLAA Q AAL I ALS 243
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 241 T I LFIA S AW SG LS KGI QY LS N LN IS L GAI L MIIT L II G P T VLI LN MMTSST G SLL N T F LFNS L DTA A LN g QKRD WM ST WT 320
Cdd:PRK09928 244 V I IATI S VT SG VN KGI RV LS E LN VL L ALG L ILFV L FM G D T SFL LN ALVLNV G DYV N R F MGMT L NSF A FD - RPTE WM NN WT 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 321 L YY W G WW LS WSPFVG V F I AR V S K GR S IR E F IS G V L LV P ALVSFV W F S V FG ---- VLG I ETGKKHP E LFKMS PE TQLFGVF 396
Cdd:PRK09928 323 L FF W A WW VA WSPFVG L F L AR I S R GR T IR Q F VL G T L II P FTFTLL W L S I FG nsal YEI I HGNAAFA E EAMAH PE RGFYSLL 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 397 HHI P MGIVLSII A LLLIAS F FI TSADS ATF VLG MQ T T - FGSL N -- PSIMVK V T W G VA QA L IAFVL L LAG G gdgska LN A I 473
Cdd:PRK09928 403 AQY P AFTFSASV A TITGLL F YV TSADS GAL VLG NF T S k LKDI N sd APNWLR V F W S VA IG L LTLGM L MTN G ------ IS A L 476
490 500
....*....|....*....|....
gi 488383788 474 Q SAAI I SAF PFSFV VIMM M ISF YK 497
Cdd:PRK09928 477 Q NTTV I MGL PFSFV IFFV M AGL YK 500
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-504
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 632.57
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 1 M NSSSH EK KN KK FS - S VFI Y S SIIVAIV V II G AIW PE KFDYIT N N A KM WIT DKL GW Y YL I L TTII V F FC IF L I FS PI GK L 79
Cdd:COG1292 1 M SDKNK EK FK KK ID p P VFI P S ALLILAF V LW G LLF PE AAGAVL N A A FS WIT TNF GW F YL L L VLLF V V FC LY L A FS KY GK I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 80 K LG KPND KPEF N T I SWFAMLFSAGMGIGLVF Y G A AEP MAD F AA PP - TAD P KTTA A YTE A LRS TFFHWG F HAWAIY GV V A L 158
Cdd:COG1292 81 R LG GDDA KPEF S T F SWFAMLFSAGMGIGLVF W G V AEP LYH F LS PP p GVE P GSPE A ARW A MAY TFFHWG L HAWAIY AL V G L 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 159 ALAY AQF R K G E P GL IS RT L R P I LG NKVE GPIG TL ID V L S VFAT LV GVA V SLG M GALQIN G GLNYLF NV PN NTL VQ G III V 238
Cdd:COG1292 161 ALAY FAY R R G L P LT IS SA L Y P L LG DRIY GPIG KV ID I L A VFAT VF GVA T SLG L GALQIN A GLNYLF GI PN SLT VQ I III A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 239 IV T I LF IA SA W SGL S KGI QY LSNLN IS L GAI L MIIT LI I GPT VL ILN MMTS S T G SL L NT F LFN SL D T A A LNG qk RD W MST 318
Cdd:COG1292 241 VI T A LF TI SA V SGL D KGI KR LSNLN MV L ALL L LLFV LI V GPT LF ILN LFVQ S L G DY L QN F VPM SL W T D A YGD -- TG W LGG 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 319 WT LY YW G WW LS W S PFVG V FIAR V S K GR S IREF IS GVLLVP A L VS F V WFSVFG VLG I ETGKKHP ---- E LFKMSP E TQ LF G 394
Cdd:COG1292 319 WT VF YW A WW IA W A PFVG L FIAR I S R GR T IREF VL GVLLVP T L FT F L WFSVFG GTA I HLELNGG gdla E AVAAGV E AA LF A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 395 VFHHI P M G IV LS II A LL L IAS FF I TSADS ATF VL G M Q T TF G SLN P SIMVKVT WGV AQA L I A F VLLLAGG gdgska L N A I Q 474
Cdd:COG1292 399 LLEQL P L G TI LS VL A II L VII FF V TSADS GSL VL A M L T SG G DEE P PRWQRIF WGV LIG L V A A VLLLAGG ------ L S A L Q 472
490 500 510
....*....|....*....|....*....|
gi 488383788 475 S A A II S A F PFSFV VIM M MI S FY K DANQERK 504
Cdd:COG1292 473 T A S II T A L PFSFV LLL M CV S LV K ALREDPR 502
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
16-502
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 599.52
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 16 VF IY S SIIVAIV V II G A I W PE KFDYIT N N A KM WITD KL GW Y YL I L TT I IVF F CI FL I FS PI G KLK LG KPN DKPEF N T I SW 95
Cdd:pfam02028 1 VF AV S AGLILAF V LL G L I F PE ALSAVV N T A LD WITD NF GW F YL L L VL I FLV F AL FL A FS RY G NIR LG GDD DKPEF S T F SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 96 FAMLF S AGMGIGLVF Y G A AEP MADFAA - PP TAD P K T TA A YTE A LRS TFFHWG F HAWAIY GV VALALAY AQF RKG E P G LIS 174
Cdd:pfam02028 81 FAMLF A AGMGIGLVF W G V AEP LSHYLS p PP GGE P G T PE A AQQ A MAY TFFHWG L HAWAIY AL VALALAY FAY RKG L P L LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 175 RT L R P I LG NKVE GPIG TL ID V L SVF AT LV GVA V SLG M GALQIN G GL N YLF NV PN NTLV Q GI II V I V T I LF IA SA W SGL S K 254
Cdd:pfam02028 161 SA L Y P L LG DRID GPIG KA ID I L AII AT VF GVA T SLG L GALQIN A GL S YLF GI PN TLTT Q LA II A I I T A LF TI SA V SGL D K 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 255 GI QY LSNLN IS L GAI L MIIT LI I GPT VL ILN MMTS S T G SL L NT F LFN S LD T AAL n G QKRD W MST WT LY YW G WW LS W S PFV 334
Cdd:pfam02028 241 GI KR LSNLN MY L AVA L LLFV LI A GPT LF ILN TFVQ S L G DY L QN F VPM S FY T DPF - G DTGG W LGG WT IF YW A WW IA W A PFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 335 G V FIAR V S K GR S IREFI S GVLLVP A L VS F V WFSVFG VLG I ETGKKH P ---- ELFKMS P ETQ LF GVFHHI P M G IV LS II AL 410
Cdd:pfam02028 320 G M FIAR I S R GR T IREFI L GVLLVP T L FT F L WFSVFG GTA I YLELNG P gdla DAVEAG P PAA LF ALLEQL P L G TI LS VL AL 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 411 LLI AS FF I TSADS A T F V LG M QTTF G S LNP SIMVK V T WGV AQALI A F VLLLAGG gdgska L N A I QSA A II S A F PFSF VVIM 490
Cdd:pfam02028 400 LLI II FF V TSADS G T L V IA M LSSG G D LNP PRWQR V F WGV LLGAV A A VLLLAGG ------ L E A L QSA S II A A L PFSF ILLL 473
490
....*....|..
gi 488383788 491 M M IS FY K DANQ E 502
Cdd:pfam02028 474 M C IS LF K ALRE E 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
54-502
5.38e-161
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 466.06
E-value: 5.38e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 54 GW Y Y LILT T IIVF F CIFLI FS PI GK LK LG KPND KPEF N T I SW F AMLF S AGMG I GL V F Y G A AEP MADFAA PP T - A D P KT T A 132
Cdd:TIGR00842 1 GW A Y ILTV T LFLG F VLYIA FS RY GK IR LG RDDE KPEF S T L SW L AMLF A AGMG A GL M F W G V AEP LTYYLT PP F g A G P TS T T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 133 A YTE AL RS T F FHWG F H A WAIY GV V A LALAY AQ FRKG E P GLI S RT L R P I LG N KV E GPIG TL ID V L SVF AT LV GVA V SLG M G 212
Cdd:TIGR00842 81 A QEQ AL AY T L FHWG I H P WAIY AL V G LALAY FH FRKG L P LRL S SA L V P L LG E KV N GPIG KA ID I L ALV AT VF GVA T SLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 213 A L QIN G GL NY LF NV P NNTLV Q GI II VI VT I L FIA S AW SG LS KGI QY LSN L N IS L GAI L MIIT LI I GPTV LI LN MMTS S T G 292
Cdd:TIGR00842 161 A P QIN A GL SA LF GI P DSFWL Q AL II LC VT A L ACI S VA SG VG KGI KI LSN I N MA L AFL L LLFV LI V GPTV FL LN SFVD S I G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 293 SL L NT F LFN S LD T AALN G q K RD W MST WT LY YW G WW L SWSPFVG V FIAR V S K GR S IREFI S GVLL V P ALVSFV WFSVFG VL 372
Cdd:TIGR00842 241 NY L QN F PQM S FR T DPDD G - K GG W PGG WT VF YW A WW I SWSPFVG M FIAR I S R GR T IREFI F GVLL G P TAFTWL WFSVFG NS 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 373 GIETGKKH ----- P ELFKMSPETQ LFG VFHHI P M G IVLSII AL L LI AS FFITSADSA TF VL G - MQTTF G S L N -- P SIM V K 444
Cdd:TIGR00842 320 ALLLQQNG gfing P FVVETNGARA LFG LLAAL P L G TITMAL AL I LI II FFITSADSA SL VL A n TTSRG G Q L G ee P PKW V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 488383788 445 V T W G VA QA LIA F VLL LA GG gdgsk A L N A I Q SAA II S A F PFSFV VIMM M I S FY KD AN Q E 502
Cdd:TIGR00842 400 V F W A VA IG LIA L VLL FS GG ----- S L A A L Q TTT II A A L PFSFV MLVV M F S LI KD LK Q D 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
1-497
1.03e-124
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 380.97
E-value: 1.03e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 1 MNS S SHEK K NKKFSS VF IY S SIIVAIVVIIGAIWPEKFDYIT N NAKM W ITDKL GWYYL ILT T IIVF F C IF LIF S PI G KL K 80
Cdd:PRK09928 4 TDL S HKRE K DRINPV VF YT S AGLILLFSLTTILFTDFSNRWI N RTLN W VSKTF GWYYL LAA T LYIV F V IF IAC S RF G SI K 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 81 LG KPND KPEF NTI SW F AMLF S AG M GI G L V F YGA AEP MADFAA PP TADPK T TA A YTE A LRS T F FH W G FHA W AI Y GVVAL AL 160
Cdd:PRK09928 84 LG PEQS KPEF SLL SW A AMLF A AG I GI D L M F FSV AEP VTQYMQ PP EGAGQ T IE A ARQ A MVW T L FH Y G LTG W SM Y ALMGM AL 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 161 A Y AQF R KGE P GL I SRT L R PI L G NKVE GPIG TLI D VLS V FA T LV G V A VS LG M G AL Q I N G GL NY LF NV P NNTLV Q GII I VIV 240
Cdd:PRK09928 164 G Y FSY R YNL P LT I RSA L Y PI F G KRIN GPIG HSV D IAA V IG T IF G I A TT LG I G VV Q L N Y GL SV LF DI P ESLAA Q AAL I ALS 243
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 241 T I LFIA S AW SG LS KGI QY LS N LN IS L GAI L MIIT L II G P T VLI LN MMTSST G SLL N T F LFNS L DTA A LN g QKRD WM ST WT 320
Cdd:PRK09928 244 V I IATI S VT SG VN KGI RV LS E LN VL L ALG L ILFV L FM G D T SFL LN ALVLNV G DYV N R F MGMT L NSF A FD - RPTE WM NN WT 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 321 L YY W G WW LS WSPFVG V F I AR V S K GR S IR E F IS G V L LV P ALVSFV W F S V FG ---- VLG I ETGKKHP E LFKMS PE TQLFGVF 396
Cdd:PRK09928 323 L FF W A WW VA WSPFVG L F L AR I S R GR T IR Q F VL G T L II P FTFTLL W L S I FG nsal YEI I HGNAAFA E EAMAH PE RGFYSLL 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 397 HHI P MGIVLSII A LLLIAS F FI TSADS ATF VLG MQ T T - FGSL N -- PSIMVK V T W G VA QA L IAFVL L LAG G gdgska LN A I 473
Cdd:PRK09928 403 AQY P AFTFSASV A TITGLL F YV TSADS GAL VLG NF T S k LKDI N sd APNWLR V F W S VA IG L LTLGM L MTN G ------ IS A L 476
490 500
....*....|....*....|....
gi 488383788 474 Q SAAI I SAF PFSFV VIMM M ISF YK 497
Cdd:PRK09928 477 Q NTTV I MGL PFSFV IFFV M AGL YK 500
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
35-499
1.09e-68
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 229.62
E-value: 1.09e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 35 PEKFDYIT N NAKMWI T DKL GW YYLILTTIIV F FCIF L I F S P IG K LK LG kp ND KPEF N T I SW FA M L F SAGMGIGLV F Y G AA 114
Cdd:PRK03356 33 LDAANVVI N AVFSYV T NVW GW AFEWYMVVML F GWFW L V F G P YA K KR LG -- DE KPEF S T A SW IF M M F ASCTSAAVL F W G SI 110
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 115 E PMADFAA PP - TAD P KT T A A YTEA L RSTF FHWG FHA WA I Y GVVAL A LA Y AQ F - RK GEPGLI S R TL R P IL G N K - VE G PI GT 191
Cdd:PRK03356 111 E IYYYIST PP f GLE P NS T G A KELG L AYSL FHWG PLP WA T Y SFLSV A FG Y FF F v RK MDVIRP S S TL V P LV G E K h AK G LF GT 190
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 192 LI D VLSVF A TLVGVAV SLG MGALQINGGLNY LF NV P NNTLVQG III VIVT IL FIASAWS GL S KG IQYL S NLNIS L GAILM 271
Cdd:PRK03356 191 IV D NFYLV A LIFAMGT SLG LATPLVTECMQW LF GI P HTLQLDA III TCWI IL NAICVAC GL Q KG VRIA S DVRSY L SFLML 270
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 272 IITL I I G P T VL I L N MM T S S T G S LL NTFLFNSLD T AALN gq K RDWMST WT LY YW G WW LSWSPFVGV F I AR V S K GR SI RE FI 351
Cdd:PRK03356 271 GWVF I V G G T SF I M N YF T D S V G M LL MYLPRMLFY T DPIG -- K GGFPQG WT VF YW A WW VIYAIQMSI F L AR I S R GR TV RE LC 348
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 352 S G VL L vp A L VSFV W F s VFG VLG IE T GKKHPE - LFKMSPETQLF GV FHH I ------- P MGIVLSIIALL L IASFFI T SADS 423
Cdd:PRK03356 349 F G MV L -- G L TAST W I - LWT VLG SN T LLLMDK n IINIPNLIEQY GV ARA I ietwaal P LSTATMWGFFI L CFIATV T LINA 425
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 488383788 424 ATFV L G M Q T TFGSL --- N P SIM V KVT W GVAQAL I AF VLL LA GG gdgska L NA IQ S A A I ISAF P FS FV V IM MMI SF Y KDA 499
Cdd:PRK03356 426 CSYT L A M S T CREVR dge E P PLL V RIG W SILVGI I GI VLL AL GG ------ L KP IQ T A I I AGGC P LF FV N IM VTL SF I KDA 498
PRK09950
PRK09950 putative transporter; Provisional
34-502
3.82e-61
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 209.65
E-value: 3.82e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 34 W P EKFDYIT N NAKM W I T DKL G WYYLILTTIIVFFCIF L IF S PI G KLK LG K pn D KPE FN T I SW FA M LFS AG M G IGLVFY G A 113
Cdd:PRK09950 30 F P QQSAAAA N TIFQ W V T RTF G SPVQLFVLLAMILVLY L AT S KY G NIR LG E -- G KPE YS T L SW LF M FIC AG L G SSTLYW G V 107
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 114 A E PMADFAA P P - TAD P KTTA A YTEALRST FFHWG FH AWA I Y GVVA L AL AY AQFRKGEP GL - I S RTLRP I L G N K VE GP I G T 191
Cdd:PRK09950 108 M E WAYYYQT P G l NIA P RSPK A LEYSVSYS FFHWG IS AWA T Y ALAS L IM AY HFHVRKNK GL s L S GIIAA I T G V K PQ GP W G R 187
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 192 L I D VLSVF AT LVGVAV SL GMG A LQING GL NY L FNV PNN TL VQ GII I VIVTIL F IA S AWS G LSK G I Q Y LS NL n ISL GA I L M 271
Cdd:PRK09950 188 L V D LMFLI AT VGALTI SL VVT A ATFTR GL SA L TGL PNN FT VQ AFV I LLSGVI F CL S SYI G IDN G L Q R LS KM - VGW GA F L F 266
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 272 - IIT LI I GPT VL I L N MMTS S T G SLLNT FL FN SL D T AALNGQK rd WMST WT LY YW G WW L S WS P F V GV F IA RVS K GR S I R E F 350
Cdd:PRK09950 267 a LLV LI V GPT EF I T N NIIN S I G LTTQN FL QM SL F T DPMGDGS -- FTRN WT VF YW L WW I S YT P G V AM F VT RVS R GR K I K E V 344
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 351 I S G VL L VPAL vs FV WF s V FGVL G ------- I ETGKKH P ELFK - MSP ET QLFGVFHHI P M G IVLSIIA L LLIAS F FITSA D 422
Cdd:PRK09950 345 I W G LI L GSSV -- GC WF - F FGVL E syaihqf I NGVINV P QILN t LGG ET AVQQLLSSL P A G KLFLAAY L GIMII F LASHM D 421
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488383788 423 SATFVLGMQT T FG --- SLN P SIMVKVT W G V AQA LI AFVL L LA G G gdgsk A L NAIQSAAIIS A F PF SFVVIMMMIS F YKDA 499
Cdd:PRK09950 422 AVAYTMAATS T RN lre GDD P DRGLRLF W C V VIT LI PLSI L FT G A ----- S L DTMKTTVVLT A L PF LVILLIKVYG F IRWL 496
...
gi 488383788 500 N Q E 502
Cdd:PRK09950 497 K Q D 499
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
