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Concise Results
Standard Results
Full Results
MULTISPECIES: YfcC family protein [Staphylococcus]
Protein Classification
YfcC family protein ( domain architecture ID 10787488 )
YfcC family protein similar to Escherichia coli YfcC, which upregulates the expression of aceA and aceB, the key genes in glyoxylate shunt
List of domain hits
Name
Accession
Description
Interval
E-value
YfcC
COG1288 Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction ...
11-520
0e+00
Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction only];
Pssm-ID: 440899 [Multi-domain]
Cd Length: 464
Bit Score: 543.19
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 11 N KKKK RFN F RM P G A FM ILFI LT V V A V I A TWIIPAG A Y SKL syepssqelkivnphhqvkkvpgtqkeldrlgvkikieqf 90
Cdd:COG1288 3 T KKKK KKK F KF P H A YV ILFI II V L A A I L TWIIPAG E Y DRV ---------------------------------------- 42
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 91 KS G ain KP V SI P NT Y ERLK Q H P A GL DQ I TSSMV KG TI EA V DI MV FIL VL GG LI G IVQAS G SFES G LL AL TQ K T KG H E FM L 170
Cdd:COG1288 43 ED G --- RT V VV P GS Y HYVE Q N P Q GL FD I FTAPI KG LV EA A DI IF FIL II GG AF G VINKT G AIDA G IG AL VR K L KG K E KL L 119
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 171 I MFVAI L MI LGGT LC G IE EE AV AFYP V LVP IF IALGYD S I VS V GA IFL ASSV G STF STINPF S V V IA SNA AG TTFTD G LY 250
Cdd:COG1288 120 I PVLML L FA LGGT TF G MA EE TI AFYP I LVP LA IALGYD A I TG V AI IFL GAGI G FAA STINPF T V G IA QGI AG LPLFS G IG 199
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 251 W R IGACIIGAIFV I S Y LFW Y C KK I KKDP KS S YS Y E D KAA F E K QWSV l H DD GSS EFT L R K K II L TL F V L P F P IM VW GV MTQ 330
Cdd:COG1288 200 L R LVIFVVFTLIA I I Y VMR Y A KK V KKDP EK S LV Y D D DEE F R K RFLK - D DD EDP EFT G R H K LV L LV F A L G F V IM IY GV LKL 278
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 331 GW W FP V MA SA FL IFT I IIMF I A gtgky GL G E KGTVD AFV N GA SS L V G VS LIIGLARGI NLVLNK G M I S DTIL HFS S SIVQ 410
Cdd:COG1288 279 GW Y FP E MA AL FL VMG I VAGI I G ----- GL S E NKIAE AFV K GA KD L L G GA LIIGLARGI LVIMED G K I L DTIL YGL S NLLS 353
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 411 HMSGP LF I I VLLFIFFC L G F I VPS S SG L A V L S MPI F APLAD T VG IP R FVI V TTY QFG QYAMLFLA PT - G LV MATL QMLNM 489
Cdd:COG1288 354 GLPPV LF A I GMFIVQSL L N F F VPS G SG Q A A L T MPI M APLAD L VG VT R QTA V LAF QFG DGLTNLIT PT s G VL MATL AIAGV 433
490 500 510
....*....|....*....|....*....|.
gi 488387384 490 R Y SH WL R FVWP VVAFVLIFGGGL LI TQ VLI Y 520
Cdd:COG1288 434 P Y DK WL K FVWP LFLILFLLAIVF LI IA VLI G 464
Name
Accession
Description
Interval
E-value
YfcC
COG1288 Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction ...
11-520
0e+00
Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction only];
Pssm-ID: 440899 [Multi-domain]
Cd Length: 464
Bit Score: 543.19
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 11 N KKKK RFN F RM P G A FM ILFI LT V V A V I A TWIIPAG A Y SKL syepssqelkivnphhqvkkvpgtqkeldrlgvkikieqf 90
Cdd:COG1288 3 T KKKK KKK F KF P H A YV ILFI II V L A A I L TWIIPAG E Y DRV ---------------------------------------- 42
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 91 KS G ain KP V SI P NT Y ERLK Q H P A GL DQ I TSSMV KG TI EA V DI MV FIL VL GG LI G IVQAS G SFES G LL AL TQ K T KG H E FM L 170
Cdd:COG1288 43 ED G --- RT V VV P GS Y HYVE Q N P Q GL FD I FTAPI KG LV EA A DI IF FIL II GG AF G VINKT G AIDA G IG AL VR K L KG K E KL L 119
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 171 I MFVAI L MI LGGT LC G IE EE AV AFYP V LVP IF IALGYD S I VS V GA IFL ASSV G STF STINPF S V V IA SNA AG TTFTD G LY 250
Cdd:COG1288 120 I PVLML L FA LGGT TF G MA EE TI AFYP I LVP LA IALGYD A I TG V AI IFL GAGI G FAA STINPF T V G IA QGI AG LPLFS G IG 199
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 251 W R IGACIIGAIFV I S Y LFW Y C KK I KKDP KS S YS Y E D KAA F E K QWSV l H DD GSS EFT L R K K II L TL F V L P F P IM VW GV MTQ 330
Cdd:COG1288 200 L R LVIFVVFTLIA I I Y VMR Y A KK V KKDP EK S LV Y D D DEE F R K RFLK - D DD EDP EFT G R H K LV L LV F A L G F V IM IY GV LKL 278
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 331 GW W FP V MA SA FL IFT I IIMF I A gtgky GL G E KGTVD AFV N GA SS L V G VS LIIGLARGI NLVLNK G M I S DTIL HFS S SIVQ 410
Cdd:COG1288 279 GW Y FP E MA AL FL VMG I VAGI I G ----- GL S E NKIAE AFV K GA KD L L G GA LIIGLARGI LVIMED G K I L DTIL YGL S NLLS 353
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 411 HMSGP LF I I VLLFIFFC L G F I VPS S SG L A V L S MPI F APLAD T VG IP R FVI V TTY QFG QYAMLFLA PT - G LV MATL QMLNM 489
Cdd:COG1288 354 GLPPV LF A I GMFIVQSL L N F F VPS G SG Q A A L T MPI M APLAD L VG VT R QTA V LAF QFG DGLTNLIT PT s G VL MATL AIAGV 433
490 500 510
....*....|....*....|....*....|.
gi 488387384 490 R Y SH WL R FVWP VVAFVLIFGGGL LI TQ VLI Y 520
Cdd:COG1288 434 P Y DK WL K FVWP LFLILFLLAIVF LI IA VLI G 464
DcuC
pfam03606 C4-dicarboxylate anaerobic carrier;
26-517
2.50e-156
C4-dicarboxylate anaerobic carrier;
Pssm-ID: 427395 [Multi-domain]
Cd Length: 454
Bit Score: 453.31
E-value: 2.50e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 26 M ILFI LT V VAV I A TW I IPAG AYS K LS yepssqelkivnphhqvkkvpgtqkeldrlgvki K I EQFK SGA IN KP VSI P N TY 105
Cdd:pfam03606 1 G ILFI IA V GYA I L TW Y IPAG VLA K AG ---------------------------------- I I LGIY SGA LG KP EVL P F TY 46
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 106 ERLKQHPAG L DQITSSMVK G TIE AVD IMV FILVLGG LI G IVQAS G SFES G LL AL TQKT KG H E FML I MFV A ILMI LGGT LC 185
Cdd:pfam03606 47 KSTGYLMLD L PIEEYVKGL G MSR AVD LGM FILVLGG FA G YMMRT G AIDA G VK AL SKPL KG I E SPY I LLL A AYFS LGGT VL 126
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 186 G IE EE A VAF Y P V L V PI FI ALGYDS IVSVG AI FL A SS VG STF ST I NPF S VVIA SNA AG TTFT DG LYW R IGACI I GA I FV I S 265
Cdd:pfam03606 127 G MS EE T VAF M P I L F PI MV ALGYDS RTGAA AI CA A TA VG FLA ST S NPF D VVIA AQI AG LPLL DG FGL R LLPWV I IT I IS I A 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 266 YL FW Y CK KIK K DP kssy S Y ED K AAFEKQWSVLHDDGSSE F t L R K K II L T L F VLPF PI M V WG -- V MTQ GWWFP VM A SA FL I 343
Cdd:pfam03606 207 YL HF Y AQ KIK D DP ---- V Y SE K DESDQHEMDEQSEVTTI F - S R P K VY L I L P VLPF IL M L WG fg V IVN GWWFP EI A VL FL A 281
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 344 FT III M FI A gt GKY GLGE KGT V D AF VN GA SS L V G VS L II GLARG IN L VLNK GMI S DTIL HFS S SIVQHMS G P LFI I V L L F 423
Cdd:pfam03606 282 MG III G FI R -- KFN GLGE NEI V E AF YE GA AD L L G FA L VV GLARG VG L FAQG GMI I DTIL NLI S GAISGLP G I LFI L V M L L 359
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 424 I FFCLG F I VPS S SG L A V L S MP IF APLAD T VGIPR F V I V TTY QF GQYAMLFLA PT - G L V M ATL Q M LNMRYSH W LR FV W P V V 502
Cdd:pfam03606 360 I QALAA F V VPS G SG P A Y L T MP LM APLAD L VGIPR A V L V LAM QF ASGLGRIIS PT s G V V V ATL G M ARISPFT W VK FV A P P V 439
490
....*....|....*
gi 488387384 503 A FV LI FGGGLL I TQ V 517
Cdd:pfam03606 440 A VG LI IVIIVT I IA V 454
PRK11588
PRK11588 putative basic amino acid antiporter YfcC;
19-519
1.09e-77
putative basic amino acid antiporter YfcC;
Pssm-ID: 236934 [Multi-domain]
Cd Length: 506
Bit Score: 252.62
E-value: 1.09e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 19 FR MP GAFM I L F ILTVV A VI AT WII P A G AYS -- KLS Y EPSS Q EL -- K I V N PH h QVKKVPGTQK E LDRLG V KI - KIEQFKS G 93
Cdd:PRK11588 13 WA MP DTLV I I F FVAIL A AL AT YVV P V G MFD sq EVQ Y QVDG Q TK tr K V V D PH - SFRILTDEAG E PEYHR V QL f TTGDERP G 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 94 AI N K P vsipntyerlkqhpag LDQI TS SMVK GT ie AV D I MV F I LV L GG LI GIV QAS G SFES G L LAL TQ KT K G H E FML I MF 173
Cdd:PRK11588 92 LM N F P ---------------- FEGL TS GSKW GT -- AV G I IM F M LV I GG AF GIV MRT G TIDN G I LAL IR KT R G N E ILF I PV 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 174 VA IL MI LGG TLC G IE EEA V AF YPVLV P IFIA LGYDSI VS V GAIFL A SSV G STF S TI NPFSV V IA SNA AG TTFTD G LYW RI 253
Cdd:PRK11588 154 LF IL FS LGG AVF G MG EEA I AF AIIIA P LMVR LGYDSI TT V LVTYV A TQI G FAT S WM NPFSV A IA QGI AG VPVLS G SGL RI 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 254 GACI I GAIFVISYLFW Y CKKI KK D P KS S YSY E DKAA F EKQ wsv LH D DGSSE FT LRKKII L TLFVLPFPIMV WGV MTQG W W 333
Cdd:PRK11588 234 VMWV I FTLIGLIFTMV Y ASRV KK N P LL S RVH E SDRF F REK --- QA D VEQRP FT FGDWLV L LVLTAVMVWVI WGV VVNA W F 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 334 F P VM AS A F LIFTII I MF I AGTGKY - G LGEKGTVDA F VN GA SSLVGVS L II G L A R GI N L V L NK G MIS D ----- TIL HFSSS 407
Cdd:PRK11588 311 I P EI AS Q F FTMGLV I GL I GVVFRL n G MTVNTMASS F TE GA RMMLAPA L LV G F A K GI L L L L GG G EPG D psvln TIL NSAGG 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 408 IVQHMSGPLFIIVL L FIFFCLG F I V P S S SG L A V L S MP IF APLAD T VG IP R F V I V TTY Q F G QYAMLFLA PT - GLV MATL QM 486
Cdd:PRK11588 391 AISGLPDAVSAWFM L LFQSVFN F F V T S G SG Q A A L T MP LM APLAD L VG VN R Q V A V LAF Q L G DGFTNIIY PT s ASL MATL GV 470
490 500 510
....*....|....*....|....*....|...
gi 488387384 487 LNMRYSH WL R F V W PVVAFVL I FGGGLL I TQVLI 519
Cdd:PRK11588 471 CRVDFGN WL K F I W RFLLLLF I MSSVVV I GAQYM 503
Name
Accession
Description
Interval
E-value
YfcC
COG1288 Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction ...
11-520
0e+00
Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction only];
Pssm-ID: 440899 [Multi-domain]
Cd Length: 464
Bit Score: 543.19
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 11 N KKKK RFN F RM P G A FM ILFI LT V V A V I A TWIIPAG A Y SKL syepssqelkivnphhqvkkvpgtqkeldrlgvkikieqf 90
Cdd:COG1288 3 T KKKK KKK F KF P H A YV ILFI II V L A A I L TWIIPAG E Y DRV ---------------------------------------- 42
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 91 KS G ain KP V SI P NT Y ERLK Q H P A GL DQ I TSSMV KG TI EA V DI MV FIL VL GG LI G IVQAS G SFES G LL AL TQ K T KG H E FM L 170
Cdd:COG1288 43 ED G --- RT V VV P GS Y HYVE Q N P Q GL FD I FTAPI KG LV EA A DI IF FIL II GG AF G VINKT G AIDA G IG AL VR K L KG K E KL L 119
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 171 I MFVAI L MI LGGT LC G IE EE AV AFYP V LVP IF IALGYD S I VS V GA IFL ASSV G STF STINPF S V V IA SNA AG TTFTD G LY 250
Cdd:COG1288 120 I PVLML L FA LGGT TF G MA EE TI AFYP I LVP LA IALGYD A I TG V AI IFL GAGI G FAA STINPF T V G IA QGI AG LPLFS G IG 199
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 251 W R IGACIIGAIFV I S Y LFW Y C KK I KKDP KS S YS Y E D KAA F E K QWSV l H DD GSS EFT L R K K II L TL F V L P F P IM VW GV MTQ 330
Cdd:COG1288 200 L R LVIFVVFTLIA I I Y VMR Y A KK V KKDP EK S LV Y D D DEE F R K RFLK - D DD EDP EFT G R H K LV L LV F A L G F V IM IY GV LKL 278
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 331 GW W FP V MA SA FL IFT I IIMF I A gtgky GL G E KGTVD AFV N GA SS L V G VS LIIGLARGI NLVLNK G M I S DTIL HFS S SIVQ 410
Cdd:COG1288 279 GW Y FP E MA AL FL VMG I VAGI I G ----- GL S E NKIAE AFV K GA KD L L G GA LIIGLARGI LVIMED G K I L DTIL YGL S NLLS 353
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 411 HMSGP LF I I VLLFIFFC L G F I VPS S SG L A V L S MPI F APLAD T VG IP R FVI V TTY QFG QYAMLFLA PT - G LV MATL QMLNM 489
Cdd:COG1288 354 GLPPV LF A I GMFIVQSL L N F F VPS G SG Q A A L T MPI M APLAD L VG VT R QTA V LAF QFG DGLTNLIT PT s G VL MATL AIAGV 433
490 500 510
....*....|....*....|....*....|.
gi 488387384 490 R Y SH WL R FVWP VVAFVLIFGGGL LI TQ VLI Y 520
Cdd:COG1288 434 P Y DK WL K FVWP LFLILFLLAIVF LI IA VLI G 464
DcuC
pfam03606 C4-dicarboxylate anaerobic carrier;
26-517
2.50e-156
C4-dicarboxylate anaerobic carrier;
Pssm-ID: 427395 [Multi-domain]
Cd Length: 454
Bit Score: 453.31
E-value: 2.50e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 26 M ILFI LT V VAV I A TW I IPAG AYS K LS yepssqelkivnphhqvkkvpgtqkeldrlgvki K I EQFK SGA IN KP VSI P N TY 105
Cdd:pfam03606 1 G ILFI IA V GYA I L TW Y IPAG VLA K AG ---------------------------------- I I LGIY SGA LG KP EVL P F TY 46
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 106 ERLKQHPAG L DQITSSMVK G TIE AVD IMV FILVLGG LI G IVQAS G SFES G LL AL TQKT KG H E FML I MFV A ILMI LGGT LC 185
Cdd:pfam03606 47 KSTGYLMLD L PIEEYVKGL G MSR AVD LGM FILVLGG FA G YMMRT G AIDA G VK AL SKPL KG I E SPY I LLL A AYFS LGGT VL 126
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 186 G IE EE A VAF Y P V L V PI FI ALGYDS IVSVG AI FL A SS VG STF ST I NPF S VVIA SNA AG TTFT DG LYW R IGACI I GA I FV I S 265
Cdd:pfam03606 127 G MS EE T VAF M P I L F PI MV ALGYDS RTGAA AI CA A TA VG FLA ST S NPF D VVIA AQI AG LPLL DG FGL R LLPWV I IT I IS I A 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 266 YL FW Y CK KIK K DP kssy S Y ED K AAFEKQWSVLHDDGSSE F t L R K K II L T L F VLPF PI M V WG -- V MTQ GWWFP VM A SA FL I 343
Cdd:pfam03606 207 YL HF Y AQ KIK D DP ---- V Y SE K DESDQHEMDEQSEVTTI F - S R P K VY L I L P VLPF IL M L WG fg V IVN GWWFP EI A VL FL A 281
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 344 FT III M FI A gt GKY GLGE KGT V D AF VN GA SS L V G VS L II GLARG IN L VLNK GMI S DTIL HFS S SIVQHMS G P LFI I V L L F 423
Cdd:pfam03606 282 MG III G FI R -- KFN GLGE NEI V E AF YE GA AD L L G FA L VV GLARG VG L FAQG GMI I DTIL NLI S GAISGLP G I LFI L V M L L 359
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 424 I FFCLG F I VPS S SG L A V L S MP IF APLAD T VGIPR F V I V TTY QF GQYAMLFLA PT - G L V M ATL Q M LNMRYSH W LR FV W P V V 502
Cdd:pfam03606 360 I QALAA F V VPS G SG P A Y L T MP LM APLAD L VGIPR A V L V LAM QF ASGLGRIIS PT s G V V V ATL G M ARISPFT W VK FV A P P V 439
490
....*....|....*
gi 488387384 503 A FV LI FGGGLL I TQ V 517
Cdd:pfam03606 440 A VG LI IVIIVT I IA V 454
PRK11588
PRK11588 putative basic amino acid antiporter YfcC;
19-519
1.09e-77
putative basic amino acid antiporter YfcC;
Pssm-ID: 236934 [Multi-domain]
Cd Length: 506
Bit Score: 252.62
E-value: 1.09e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 19 FR MP GAFM I L F ILTVV A VI AT WII P A G AYS -- KLS Y EPSS Q EL -- K I V N PH h QVKKVPGTQK E LDRLG V KI - KIEQFKS G 93
Cdd:PRK11588 13 WA MP DTLV I I F FVAIL A AL AT YVV P V G MFD sq EVQ Y QVDG Q TK tr K V V D PH - SFRILTDEAG E PEYHR V QL f TTGDERP G 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 94 AI N K P vsipntyerlkqhpag LDQI TS SMVK GT ie AV D I MV F I LV L GG LI GIV QAS G SFES G L LAL TQ KT K G H E FML I MF 173
Cdd:PRK11588 92 LM N F P ---------------- FEGL TS GSKW GT -- AV G I IM F M LV I GG AF GIV MRT G TIDN G I LAL IR KT R G N E ILF I PV 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 174 VA IL MI LGG TLC G IE EEA V AF YPVLV P IFIA LGYDSI VS V GAIFL A SSV G STF S TI NPFSV V IA SNA AG TTFTD G LYW RI 253
Cdd:PRK11588 154 LF IL FS LGG AVF G MG EEA I AF AIIIA P LMVR LGYDSI TT V LVTYV A TQI G FAT S WM NPFSV A IA QGI AG VPVLS G SGL RI 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 254 GACI I GAIFVISYLFW Y CKKI KK D P KS S YSY E DKAA F EKQ wsv LH D DGSSE FT LRKKII L TLFVLPFPIMV WGV MTQG W W 333
Cdd:PRK11588 234 VMWV I FTLIGLIFTMV Y ASRV KK N P LL S RVH E SDRF F REK --- QA D VEQRP FT FGDWLV L LVLTAVMVWVI WGV VVNA W F 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 334 F P VM AS A F LIFTII I MF I AGTGKY - G LGEKGTVDA F VN GA SSLVGVS L II G L A R GI N L V L NK G MIS D ----- TIL HFSSS 407
Cdd:PRK11588 311 I P EI AS Q F FTMGLV I GL I GVVFRL n G MTVNTMASS F TE GA RMMLAPA L LV G F A K GI L L L L GG G EPG D psvln TIL NSAGG 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 408 IVQHMSGPLFIIVL L FIFFCLG F I V P S S SG L A V L S MP IF APLAD T VG IP R F V I V TTY Q F G QYAMLFLA PT - GLV MATL QM 486
Cdd:PRK11588 391 AISGLPDAVSAWFM L LFQSVFN F F V T S G SG Q A A L T MP LM APLAD L VG VN R Q V A V LAF Q L G DGFTNIIY PT s ASL MATL GV 470
490 500 510
....*....|....*....|....*....|...
gi 488387384 487 LNMRYSH WL R F V W PVVAFVL I FGGGLL I TQVLI 519
Cdd:PRK11588 471 CRVDFGN WL K F I W RFLLLLF I MSSVVV I GAQYM 503
GntT
COG2610 H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and ...
113-461
2.17e-04
H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and metabolism];
Pssm-ID: 442022 [Multi-domain]
Cd Length: 440
Bit Score: 43.56
E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 113 AG L DQ I TS S MVK G tie AVDIM -- VFILV - LG GLI G - IVQA SG SF E SGLLALTQ K TKGHEFM L IMFV A ilmilg G TLC GI - 187
Cdd:COG2610 42 MP L AK I VT S IMT G --- FGGTL gs IGLVI g LG AML G k LLED SG AA E RIADTIIK K FGEKRAP L ALVL A ------ G FIL GI p 112
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 188 --- EEEA V AFY P VLVPIFIAL G YDSIVSVG A IFLAS S VGSTFSTIN P f SVVI A SNAA G TTFTDGLYWRIGAC I IGA I FVI 264
Cdd:COG2610 113 vff DVGF V ILA P LAFSLARRA G ISKLLIGL A LAAGL S TTHMLVPPT P - GPLA A AGIL G ADLGAVILLGLIVA I PAL I VGY 191
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 265 S Y LF W YC KK IKKDPKSSYSY E DKAAF E KQWSVLH ddgsseftlrkk II L T L FVLPF PI MVWGVM T ------- QGWWFP V M 337
Cdd:COG2610 192 L Y AK W LG KK APVPAPEGLAG E EDEEE E DDEELPS ------------ FG L A L LPILL PI VLILLG T iadllpk DSALVQ V L 259
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 338 A sa F LIFT II IMF I AG ----- TGKY GL GEKGTVDAFVN G ASSLVGVS LI I G LARGINL VL NKGM I S D T I lhfs SSIVQHM 412
Cdd:COG2610 260 A -- F IGDP II ALL I GV lvail LLRR GL SREELMKILNE G LKPAGLIL LI T G AGGAFGA VL AASG I G D A I ---- ADALSGL 333
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 488387384 413 SG P L fi IV L L F IF - FC L GFIVP S SSGLAVLSMP I F APL ADTV G IPRFVI V 461
Cdd:COG2610 334 GL P P -- LL L A F LI a AL L RGATG S ATVAMITAAG I L APL LLAL G VSPELL V 381
DctM
pfam06808 Tripartite ATP-independent periplasmic transporter, DctM component; This family contains a ...
190-515
2.39e-04
Tripartite ATP-independent periplasmic transporter, DctM component; This family contains a diverse range of predicted transporter proteins. Including the DctM subunit of the bacterial and archaeal TRAP C4-dicarboxylate transport (Dct) system permease. In general, C4-dicarboxylate transport systems allow C4-dicarboxylates like succinate, fumarate, and malate to be taken up. TRAP C4-dicarboxylate carriers are secondary carriers that use an electrochemical H+ gradient as the driving force for transport. DctM is an integral membrane protein that is one of the constituents of TRAP carriers. Note that many family members are hypothetical proteins.
Pssm-ID: 284275 [Multi-domain]
Cd Length: 413
Bit Score: 43.40
E-value: 2.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 190 EAVAFYP V LV P IFIAL GY DSIVSVGAIFLA S SV G STFSTINPF s VVIASNA AG TTFT D GLY -- WRI G ACIIGAIFVIS Y L 267
Cdd:pfam06808 110 NVATVGS V TI P AMKRS GY PPSFAAAVEAAS S TL G QIIPPSIGL - IAFGMAF AG VSIG D LFM ag IIP G LLYAVGLMLAV Y I 188
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 268 FWYCKKIKKD P KSSYSYEDK A AFEKQ W SV L hddgsseftlrkkiiltlfvlp F P IMVWGVMTQ G WWF P VM A S A FLIFTII 347
Cdd:pfam06808 189 YAKRRNLPGT P RALLPRAGQ A LKDGW W AL L ---------------------- L P FIILIGILL G IFT P TE A G A YAVVYAL 246
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 348 IMFIAGTGKYG L G E kg TVD A FVNG A SSLVG V SL I IGL A RGINLV L NKGMISDTILHFSS S IV qh MSGP LF I I VLLFIFFC 427
Cdd:pfam06808 247 LIGVLVYRRLT L E E -- VAA A LLQT A KTTAA V LF I LAA A GIFAGL L TITGVPFKLSDWLL S LG -- GGNL LF L I LVNLLCLV 322
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488387384 428 LG FIVPSSSGLAV L S m PI F AP L A DTV GI PR ---- F VIV TTYQF G qyam L FLA P T GL VMATLQ ml NMRYSHWLRF V WP VV A 503
Cdd:pfam06808 323 LG MFLDPTAAIII L V - PI L AP A A AQL GI DP ihfg V VIV YNGSI G ---- L ITP P V GL ALFVAA -- GIAKVSFEEV V KG VV P 395
330
....*....|..
gi 488387384 504 F VLIFGGG L LIT 515
Cdd:pfam06808 396 F LFVLVPA L VLI 407
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
